BAC Information

Click to search

BAC

Clone NameB6Ng01-073H08
Chromosome2 (Build37)
Map Location 116,923,261 - 116,924,296
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC433464, Tmco5, LOC100043557, LOC241621
Downstream geneSpred1, LOC624574, 2610510H03Rik, Rasgrp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073H08.bB6Ng01-073H08.g
ACCDH890584DH890585
length6801,034
definitionDH890584|Mus musculus domesticus DNA, BAC clone: B6Ng01-073H08, 5' end.DH890585|Mus musculus domesticus DNA, BAC clone: B6Ng01-073H08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggtcacttggtctgcagagtgggatacaggccagtcagggat
gcacactactaatacactaacactaacactaacactaatacattctcact
atgccacagacttgcacacctaagaaactttaactctcaacaatactacc
ctacttaccaaatcacacatatcaacaacctttcttagctgttattctcc
catgacgtctaacaaatatatagaaatgctatccaaaaccagctcgcaag
ctctctctcaagacaactaaaacgtaaacactcagaaaacaataacttta
aacaaccattctaagggacagcagggtgggcctggtagagcacttaccca
gcaagcgcagaggggaggggagggagagcaggggagaagaaggtggagga
ttttttcattgtaagtagatcatattgctattggccaaagcccctgtccc
tcacatgttaattgcatattgttaactcattaaatgaatttaacatatgt
ttacaacatccctgacgcatcatattatgggagcgttcagattttggcaa
atataaataaggaacagtgaattatttataaacctcacacacaagcagag
aaaagtttttgaaatcactaagcagttacacacttacacaactttctttt
tctaggaatatttgaaagggtattaaatta

gaattccaggctcagagaaacaccctgtttctaaatacaagggtgtgtgt
ggcggggggaggggcagagacttgaggaagacagctgacaacaacctctg
ccctctacatatatgtccacctgcaagtagaacccatggaaataccaggt
aggtgtgagaatctataattccagcttcagaagacagagacaactggcta
gccagactaacgctatcagtgagctctgggtttgactgagactctgcctc
catgaatcagttggaagagcaatggaggatggttctagacatcaaccttg
ggtttcacgtgcctagacacacatgtacatatacctacatacaaaacaga
aaagtcaattaaccaagcagggtgactactactttacagagaagcaaatc
actcagtactaagggaaaatgatagagccacccctgcttggcacaaacaa
acattacattcttgtctgtttcagttgttggagaagctgttccctgaaga
aggataagaaactaggatttcagcacacttcctaagatgcagtatatgaa
ctctcccactgagtcaggctatattggccccatctgtgacctcaggcaac
agtggtaaatactgggaacacaaaagaaaaaaggtgaatctcttcgaatc
ccccatgttaatgcacccagatggtcatggtgctctctgaggtaggtgtg
tcatctgggaaaggaaccagggctctcagtcacttctgaatcgcagacct
gcaaataaacagtgagggctggaacagcaggaacaacctccagagatgga
ctggacgggaagtgcttgtgcaatgctcacctgcagtctgtctgctgctt
tcatgcactcactgtgcaaacagctcctcaaagtgaaatcttttccaaac
agacccttttttgggagaaataccagctgataattaaagccaagtctata
ggagaatggatagaagtagcagaacattcccgaaggagaacaaagcggaa
gacatgattagaagatgaaggagacttttttaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_116923261_116924296
seq2: B6Ng01-073H08.g_71_1104

seq1  GAATTCCAGGCTCAGAGAAACACCCTGTTTCTAAATACAAGGGTGTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCTCAGAGAAACACCCTGTTTCTAAATACAAGGGTGTGTGT  50

seq1  GGCGGGGGGAGGGGCAGAGACTTGAGGAAGACAGCTGACAACAACCTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGGGGGAGGGGCAGAGACTTGAGGAAGACAGCTGACAACAACCTCTG  100

seq1  CCCTCTACATATATGTCCACCTGCAAGTAGAACCCATGGAAATACCAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTACATATATGTCCACCTGCAAGTAGAACCCATGGAAATACCAGGT  150

seq1  AGGTGTGAGAATCTATAATTCCAGCTTCAGAAGACAGAGACAACTGGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGAGAATCTATAATTCCAGCTTCAGAAGACAGAGACAACTGGCTA  200

seq1  GCCAGACTAACGCTATCAGTGAGCTCTGGGTTTGACTGAGACTCTGCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGACTAACGCTATCAGTGAGCTCTGGGTTTGACTGAGACTCTGCCTC  250

seq1  CATGAATCAGTTGGAAGAGCAATGGAGGATGGTTCTAGACATCAACCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATCAGTTGGAAGAGCAATGGAGGATGGTTCTAGACATCAACCTTG  300

seq1  GGTTTCACGTGCCTAGACACACATGTACATATACCTACATACAAAACAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCACGTGCCTAGACACACATGTACATATACCTACATACAAAACAGA  350

seq1  AAAGTCAATTAACCAAGCAGGGTGACTACTACTTTACAGAGAAGCAAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCAATTAACCAAGCAGGGTGACTACTACTTTACAGAGAAGCAAATC  400

seq1  ACTCAGTACTAAGGGAAAATGATAGAGCCACCCCTGCTTGGCACAAACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGTACTAAGGGAAAATGATAGAGCCACCCCTGCTTGGCACAAACAA  450

seq1  ACATTACATTCTTGTCTGTTTCAGTTGTTGGAGAAGCTGTTCCCTGAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTACATTCTTGTCTGTTTCAGTTGTTGGAGAAGCTGTTCCCTGAAGA  500

seq1  AGGATAAGAAACTAGGATTTCAGCACACTTCCTAAGATGCAGTATATGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAAGAAACTAGGATTTCAGCACACTTCCTAAGATGCAGTATATGAA  550

seq1  CTCTCCCACTGAGTCAGGCTATATTGGCCCCATCTGTGACCTCAGGCAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCACTGAGTCAGGCTATATTGGCCCCATCTGTGACCTCAGGCAAC  600

seq1  AGTGGTAAATACTGGGAACACAAAAG-AAAAAGGTGAATCTCTTCGAATC  649
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGTGGTAAATACTGGGAACACAAAAGAAAAAAGGTGAATCTCTTCGAATC  650

seq1  CCCCATGTTAATGCACCCAGATGGTCATGGTGCTCTCTGAGGTAGGTGTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATGTTAATGCACCCAGATGGTCATGGTGCTCTCTGAGGTAGGTGTG  700

seq1  TCATCT-GGAAAGGAACCAGGGCTCTCAGTCACTTCTGAATCGCAGACCT  748
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGGGAAAGGAACCAGGGCTCTCAGTCACTTCTGAATCGCAGACCT  750

seq1  GCAGATAAACAGTGAGGGCTGGAACAGCAGGAACAACCTCCAGAGATGGA  798
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATAAACAGTGAGGGCTGGAACAGCAGGAACAACCTCCAGAGATGGA  800

seq1  CTGGACGGGAAGTGCTTTTGCAATGCTCACCTGCAGTCTGTCTGCTGCCT  848
      ||||||||||||||||| |||||||||||||||||||||||||||||| |
seq2  CTGGACGGGAAGTGCTTGTGCAATGCTCACCTGCAGTCTGTCTGCTGCTT  850

seq1  TCAATGCACTCACTGTGCAAACAGC-CCTCAAAGTGAAACCTTTTCCAAA  897
      || |||||||||||||||||||||| ||||||||||||| ||||||||||
seq2  TC-ATGCACTCACTGTGCAAACAGCTCCTCAAAGTGAAATCTTTTCCAAA  899

seq1  CAGACCCTTTCTTTGGAAGAAATACCACTTGTATATTAAAGCAAATTCTA  947
      |||||||||| ||||| ||||||||||  ||   |||||||| || ||||
seq2  CAGACCCTTT-TTTGGGAGAAATACCAGCTGATAATTAAAGCCAAGTCTA  948

seq1  TAAGGAG-ATGGATAAGAAGTAGCAAGAACAATCCCAGAGGAGAAGAGAG  996
      | ||||| |||||| ||||||||| |||||| ||||  ||||||| | ||
seq2  T-AGGAGAATGGAT-AGAAGTAGC-AGAACATTCCCGAAGGAGAACAAAG  995

seq1  GGGATGACATGATTAGAAGATGAAGGAGACTTTTTATAAT  1036
       ||| |||||||||||||||||||||||||||||| ||||
seq2  CGGAAGACATGATTAGAAGATGAAGGAGACTTTTT-TAAT  1034


| Home | SequenceCutter | Blast | Download |