BAC Information

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BAC

Clone NameB6Ng01-074N06
Chromosome2 (Build37)
Map Location 39,912,693 - 39,913,903
singlet/doubletsinglet
Overlap genenone
Upstream geneGolga1, A930041I02Rik, LOC100042584, Ppp6c, Vmn2r-ps2, Ppia-ps2_560.1
Downstream geneLOC100042604, Magmas-ps, LOC666531, Lrp1b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074N06.bB6Ng01-074N06.g
ACCDH891568DH891569
length1,2131,254
definitionDH891568|Mus musculus domesticus DNA, BAC clone: B6Ng01-074N06, 5' end.DH891569|Mus musculus domesticus DNA, BAC clone: B6Ng01-074N06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatcagttaagaattacaaatgcaaatgtcataaactgcagagg
gaacagtaaaagttacaaatcaagcagaatttaagaaccatcagaagaaa
gggatggatattgctattaaattgaattttggaataaactcagagagaaa
aatactattgtggttggcatttaaatatatccctgtcctggaaatataga
gaggcaggtacatactatgttagaatggctaatcttggttgttaacttga
ctggacctagaataaactaagatatacatcactgtgcacaactatgtgga
cttttctttagcaggttatttgaaataggaagatgcaccttaaatgtggg
cagaaccttctactgacatcccagataaaaggtctaaggatcctcataac
tctgaaattgtgtccttctgagaaaacagaaccaaatatcaacagaggta
tgctgtcaacagcaaatattaagtaaagtgtgttcagatcaataaaacat
cttacaatgcctgagaagaggccattgtaagaagaacccatagcagagat
taattatgatttaaaagcactacaaggaagttctaaagtaccacctggag
cagctccagagagtgataagagcaacttcaggaagtcctgtgccactgag
tgagaacaacttaggatcaagatgctagaaatttccatccagaaatatat
gctgttaataatgaataaattagacatacatttttttacataaaaataaa
acatgtagggctagttagatatcttagctgataatagtttctgactgctc
ccaaacccaatgatctgagtttggtccacaagacccacatgggcagaatg
aaagaaccaactgtaataagttgtccaaaaacttccagaaacatatcgct
tacatcctacccttacataggacataaaataaaagtgtaataaaaattaa
aatatactataatacatatggccaggtatatattgtcaagaatgaacctc
acagaagtctcatcttgaaaacttttctagttggtaccctaacatcttca
gatttgtgcttcttctacatagagccaagcacaacttcagtttgaagcat
atgcttgctgtgcttcatactgactcactatgttctaacacaggtgttcc
ttttgaacatggaaaacaatttctcataatacatctccagttctggaata
caaatcatatctc
gaattcaagaaggtagactccagaaaatcaaataaccccattaaaatatg
gggctcagaactgaacaaagaattctcacctgaggaatactgaatggcag
agaagcacctgaaaaaaatgttcaacatccttaatcatcagggaaatgga
aatcaaaacaaccctgagaatccacctcacaccagtcagaatggctaaga
tcaaaaattcaggtgacagcagatgctggcatggatgtggagaaagagga
acacttctgcattgtttgtgggattgcaagcttgtacaaccactctggaa
atcagtctggcggttccttagaaaattggacatagtactactggaggaat
acctctcctgggcatatatccagaagatgtcccaaccggtaagaaggaca
catgctccactatgttcatagcaaccttatttataatagccagaagctgg
aaagaacccagatgcccctcaacagaggaatgaatacagaaaatggggta
catttacacaatggaataccactcagctattaaaaagaataaatttatga
aattcctagccaaatggatggacctggagggcatcatcctgagtgaggta
acacatacacaaaggaactcacacaatatgtactcactgataagtggata
ttagcccaaaacctaggatacccaagatataagatacaatttgctaaacg
tatgaaactcaagaagaatgaagatcaaagtatggacactgtgccccttc
ttagaattgggaacaaaacacccatggaaggagttacagagacaaagttt
ggatctgagacaaaaggatggaccatctagagactgccgtatccaaggaa
tccatcccataatcagcttctaaacgctgacaccattgcatacactagca
agattttgctgaaaggacccagatatagctgtctcttgtgagactatgcc
ggggcctagcaaacacagaagtggatgctcacagtcagctattgggatgg
atcacagggtccccaatggaggagctagagaaaatatccagagctaaagg
gatctgcaaccctatagtggaacaacatatgaactaccagtacctcagag
cctctgactctagctgcatatgtatcaaaaagaatggcctagtcggcact
cactggaagagagcctttggacatacacctttattgatcagttacaggcg
acggccaggcccaaaacattgggaataggtgggtggtatcgatgcagaaa
gtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_39912693_39913903
seq2: B6Ng01-074N06.b_45_1257

seq1  GAATTCTATCAGTTAAGAATTACAAATGCAAATGTCATAAACTGCAGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCAGTTAAGAATTACAAATGCAAATGTCATAAACTGCAGAGG  50

seq1  GAACAGTAAAAGTTACAAATCAAGCAGAATTTAAGAACCATCAGAAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGTAAAAGTTACAAATCAAGCAGAATTTAAGAACCATCAGAAGAAA  100

seq1  GGGATGGATATTGCTATTAAATTGAATTTTGGAATAAACTCAGAGAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGGATATTGCTATTAAATTGAATTTTGGAATAAACTCAGAGAGAAA  150

seq1  AATACTATTGTGGTTGGCATTTAAATATATCCCTGTCCTGGAAATATAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTATTGTGGTTGGCATTTAAATATATCCCTGTCCTGGAAATATAGA  200

seq1  GAGGCAGGTACATACTATGTTAGAATGGCTAATCTTGGTTGTTAACTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGGTACATACTATGTTAGAATGGCTAATCTTGGTTGTTAACTTGA  250

seq1  CTGGACCTAGAATAAACTAAGATATACATCACTGTGCACAACTATGTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACCTAGAATAAACTAAGATATACATCACTGTGCACAACTATGTGGA  300

seq1  CTTTTCTTTAGCAGGTTATTTGAAATAGGAAGATGCACCTTAAATGTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTTAGCAGGTTATTTGAAATAGGAAGATGCACCTTAAATGTGGG  350

seq1  CAGAACCTTCTACTGACATCCCAGATAAAAGGTCTAAGGATCCTCATAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACCTTCTACTGACATCCCAGATAAAAGGTCTAAGGATCCTCATAAC  400

seq1  TCTGAAATTGTGTCCTTCTGAGAAAACAGAACCAAATATCAACAGAGGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAATTGTGTCCTTCTGAGAAAACAGAACCAAATATCAACAGAGGTA  450

seq1  TGCTGTCAACAGCAAATATTAAGTAAAGTGTGTTCAGATCAATAAAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCAACAGCAAATATTAAGTAAAGTGTGTTCAGATCAATAAAACAT  500

seq1  CTTACAATGCCTGAGAAGAGGCCATTGTAAGAAGAACCCATAGCAGAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAATGCCTGAGAAGAGGCCATTGTAAGAAGAACCCATAGCAGAGAT  550

seq1  TAATTATGATTTAAAAGCACTACAAGGAAGTTCTAAAGTACCACCTGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATGATTTAAAAGCACTACAAGGAAGTTCTAAAGTACCACCTGGAG  600

seq1  CAGCTCCAGAGAGTGATAAGAGCAACTTCAGGAAGTCCTGTGCCACTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCAGAGAGTGATAAGAGCAACTTCAGGAAGTCCTGTGCCACTGAG  650

seq1  TGAGAACAACTTAGGATCAAGATGCTAGAAATTTCCATCCAGAAATATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAACAACTTAGGATCAAGATGCTAGAAATTTCCATCCAGAAATATAT  700

seq1  GCTGTTAATAATGAATAAATTAGACATACATTTTTTTACATAAAAATAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTAATAATGAATAAATTAGACATACATTTTTTTACATAAAAATAAA  750

seq1  ACATGTAGGGCTAGTTAGATATCTTAGCTGATAATAGTTTCTGACTGCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTAGGGCTAGTTAGATATCTTAGCTGATAATAGTTTCTGACTGCTC  800

seq1  CCAAACCCAATGATCTGAGTTTGGTCCACAAGACCCACATGGGCAGAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCCAATGATCTGAGTTTGGTCCACAAGACCCACATGGGCAGAATG  850

seq1  AAAGAACCAACTGTAATAAGTTGTCCAAAAACTTCCAGAAACATATCGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACCAACTGTAATAAGTTGTCCAAAAACTTCCAGAAACATATCGCT  900

seq1  TACATCCTACCCTTACATAGGACATAAAATAAAAGTGTAATAAAAATTAA  950
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TACATCCTACCCTTACATAGGACATAAAATAAAAGTGTAATAAAAATT-A  949

seq1  AAATATACTATAATACATATGGCCAGGTATATATTGTCAAGAATGAACCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATACTATAATACATATGGCCAGGTATATATTGTCAAGAATGAACCT  999

seq1  CACAGAAGTCTCATCTTGAAAAACTTTTCTAGTTGGTACCCTAACATCTT  1050
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CACAGAAGTCTCATCTTG-AAAACTTTTCTAGTTGGTACCCTAACATCTT  1048

seq1  CAGATTTGTGCTTCTTCTTACATAGAGCCAAGCACAACTTCAGTTTGAAG  1100
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CAGATTTGTGCTTCTTC-TACATAGAGCCAAGCACAACTTCAGTTTGAAG  1097

seq1  CATATGCTTGCTGTGCTTCATACTGACTCACTATG-TCTTACACATGTGT  1149
      ||||||||||||||||||||||||||||||||||| ||| ||||| ||||
seq2  CATATGCTTGCTGTGCTTCATACTGACTCACTATGTTCTAACACAGGTGT  1147

seq1  TCCTTT--GACATGGAGAACTATTTCTTCATTAT-CATCT-CAGTTCTTG  1195
      ||||||   ||||||| ||| ||||| |||| || ||||| ||||||| |
seq2  TCCTTTTGAACATGGAAAACAATTTC-TCATAATACATCTCCAGTTCTGG  1196

seq1  -ATACAAATCATATCTC  1211
       ||||||||||||||||
seq2  AATACAAATCATATCTC  1213