BAC Information

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BAC

Clone NameB6Ng01-075F12
Chromosome2 (Build37)
Map Location 62,433,024 - 62,557,317
singlet/doubletdoublet
Overlap geneIfih1, Gca, Kcnh7
Upstream geneTank, Psmd14, Tbr1, LOC100039274, Slc4a10, Dpp4, Gcg, Fap
Downstream geneEG667257
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075F12.bB6Ng01-075F12.g
ACCDH891929DH891930
length1,1631,163
definitionDH891929|Mus musculus domesticus DNA, BAC clone: B6Ng01-075F12, 5' end.DH891930|Mus musculus domesticus DNA, BAC clone: B6Ng01-075F12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,433,024 - 62,434,175)(62,556,155 - 62,557,317)
sequence
gaattctagggagtaacatctggattgtgtttttaaagagtcataaacaa
tatctgccgaagaagtgtcaaagaatgccttcctatttgaataaagacga
gagtgaccagaaagtactatagcagtgtagcaggagtataaggtaaggca
cagaatgtcacgggtgcccaggaagtgatttaagttgggcaatttagata
tctatttttctcttcatcttcttctcctaagtgtgtgtttgagacttgca
cgtttaaaaagctacaatggcaagagggactctgactcttccatagctct
ttcagttgaattgtaaacatctgcaatgtctttttttccaaggcagtact
ttctgctctaaccgatactgaattgcagagaagaaaatacctacttctct
tatagcacagtccactttgaacatttacttgtgacatgtattaatggctt
ttgagaagtcatttcatgtccatgggctatggttgagagaaaaagtacag
gcatggagcaagaagcacaaggcattcatgggttagggcagtgaaggaac
attaatccagttgtgcatgactcaggagaacacagatatgcgacaggaag
ttggtgaaagtcattcaaacaaccaaagaactaagacatggccactctaa
gtcccagactcatgactttgtatcatgagtatattctgtcaatcggtgcc
aagatattaaggatattacagtgttcaataacaatttatcaagatgtaac
aatctgtagttgctttttttaaaaaaaaatgtgtctactaaagtttaagt
tgccatacatcatcacatattaaattaatagtatctgaaatatacatctt
taatttagaaataactattgaaataaaatattgacaaaaccaaacaaata
tacaccctgatatttgttgatgtttcagaaacagaatatatattgttaca
gtggtctacttgggatatcttagaaaatttgatttcctggcatagtttcc
aaaattctttagaattagaacaatactttaaattagatttaagatggaat
gcttcaagtatttttaagaaaaccaaatccttctttttgtccatttatat
tcctaagagttctgattaattatttttcatttttgcctcagttctctcat
taaagattcaaga
gaattcaaatgcccttcattttataatctcacttcttccaacttttaatt
aactcttgtctatgcccaaccaattatattttcaaatgattttagcatct
ccaaacatccatgttttcaaaaatgtagaaagtaatccacattcaagtca
tgaataattatcttgataatgaggggctaaatatgcatgtctattgacaa
aggaaacggatgacataaagcccccatcaaaatgacatacacttaacata
actcatcattataattaaccaatgaagaattttaaaacatgattcatgca
aagatcattccccagtaagagtctaagtgcaatactatataatagtaatg
agctccaatatgtaagtacaattctagatatagacatagctactgcagtt
tgaactacgggactctaacagtttagtttcattattaatagtcaatttca
ctcccttgtattctggtacttgtcattccaaagaaggactcatttaagca
aaacttaaaagagaaaagaaattaagatgactttggccttcctaatgctg
aggtcaaatgtagactctggtgaaactgtgaaccctgaaaatgaaggttt
acccactgctcacccatttgcagaagtgtgtcttgcaactatagcaacat
tttccaaggcaaccaagtgcagatactgtctgagctatttttagaaggtg
tctacaaggatgctcatttgattaggacgactaaccagggttttccctct
ttgaactcttttatttttcattccaccattaaaacaagttaatcacatat
ctctaaatttcaattaaaaattaaatttagtcaaggaaacctcaatctca
cagtacacgttttattcatttctgctaagaaaatctttttttttccttaa
gggtcaagaaatattgctatcctccattaatttatacatgtgattcaccc
agtggtgtttaaaatcaatgtgtacaatgattgtaaaatgaacgtgctgc
ttagcagaaggcaaatttcatgaggtttccggcacaaagctcatgagaat
gttacatagcctttcaatgctatcagttctcaattctctcctaagaagtg
ttctatatggaaatggatattgaaaacaaagctggactatcctggcatca
ctagggctctttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_62433024_62434175
seq2: B6Ng01-075F12.b_48_1210

seq1  GAATTCTAGGGAGTAACATCTGGATTGTGTTTTTAAAGAGTCATAAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGGAGTAACATCTGGATTGTGTTTTTAAAGAGTCATAAACAA  50

seq1  TATCTGCCGAAGAAGTGTCAAAGAATGCCTTCCTATTTGAATAAAGACGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGCCGAAGAAGTGTCAAAGAATGCCTTCCTATTTGAATAAAGACGA  100

seq1  GAGTGACCAGAAAGTACTATAGCAGTGTAGCAGGAGTATAAGGTAAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGACCAGAAAGTACTATAGCAGTGTAGCAGGAGTATAAGGTAAGGCA  150

seq1  CAGAATGTCACGGGTGCCCAGGAAGTGATTTAAGTTGGGCAATTTAGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGTCACGGGTGCCCAGGAAGTGATTTAAGTTGGGCAATTTAGATA  200

seq1  TCTATTTTTCTCTTCATCTTCTTCTCCTAAGTGTGTGTTTGAGACTTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTTTCTCTTCATCTTCTTCTCCTAAGTGTGTGTTTGAGACTTGCA  250

seq1  CGTTTAAAAAGCTACAATGGCAAGAGGGACTCTGACTCTTCCATAGCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTAAAAAGCTACAATGGCAAGAGGGACTCTGACTCTTCCATAGCTCT  300

seq1  TTCAGTTGAATTGTAAACATCTGCAATGTCTTTTTTTCCAAGGCAGTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTGAATTGTAAACATCTGCAATGTCTTTTTTTCCAAGGCAGTACT  350

seq1  TTCTGCTCTAACCGATACTGAATTGCAGAGAAGAAAATACCTACTTCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTCTAACCGATACTGAATTGCAGAGAAGAAAATACCTACTTCTCT  400

seq1  TATAGCACAGTCCACTTTGAACATTTACTTGTGACATGTATTAATGGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCACAGTCCACTTTGAACATTTACTTGTGACATGTATTAATGGCTT  450

seq1  TTGAGAAGTCATTTCATGTCCATGGGCTATGGTTGAGAGAAAAAGTACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAGTCATTTCATGTCCATGGGCTATGGTTGAGAGAAAAAGTACAG  500

seq1  GCATGGAGCAAGAAGCACAAGGCATTCATGGGTTAGGGCAGTGAAGGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGAGCAAGAAGCACAAGGCATTCATGGGTTAGGGCAGTGAAGGAAC  550

seq1  ATTAATCCAGTTGTGCATGACTCAGGAGAACACAGATATGCGACAGGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATCCAGTTGTGCATGACTCAGGAGAACACAGATATGCGACAGGAAG  600

seq1  TTGGTGAAAGTCATTCAAACAACCAAAGAACTAAGACATGGCCACTCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGAAAGTCATTCAAACAACCAAAGAACTAAGACATGGCCACTCTAA  650

seq1  GTCCCAGACTCATGACTTTGTATCATGAGTATATTCTGTCAATCGGTGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAGACTCATGACTTTGTATCATGAGTATATTCTGTCAATCGGTGCC  700

seq1  AAGATATTAAGGATATTACAGTGTTCAATAACAATTTATCAAGATGTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTAAGGATATTACAGTGTTCAATAACAATTTATCAAGATGTAAC  750

seq1  AATCTGTAGTTGCTTTTTTTAAAAAAAAATGTGTCTACTAAAGTTTAAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTAGTTGCTTTTTTTAAAAAAAAATGTGTCTACTAAAGTTTAAGT  800

seq1  TGCCATACATCATCACATATTAAATTAATAGTATCTGAAATATACATCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATACATCATCACATATTAAATTAATAGTATCTGAAATATACATCTT  850

seq1  TAATTTAGAAATAACTATTGAAATAAAATATTGACAAAACCAAACAAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAGAAATAACTATTGAAATAAAATATTGACAAAACCAAACAAATA  900

seq1  TACACCCTGATATTTGTTGATGTTTCAGAAACAGAATATATA-TGTTACA  949
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TACACCCTGATATTTGTTGATGTTTCAGAAACAGAATATATATTGTTACA  950

seq1  GTGGTCTACTT-GGATATCTTAG-ATATTTGATTTCCT-GCATAGTTTCC  996
      ||||||||||| ||||||||||| | |||||||||||| |||||||||||
seq2  GTGGTCTACTTGGGATATCTTAGAAAATTTGATTTCCTGGCATAGTTTCC  1000

seq1  AAAATTCTTTAGAA-TAGAACAATACTTTAAA-TAGATTT-AGATGGAAT  1043
      |||||||||||||| ||||||||||||||||| ||||||| |||||||||
seq2  AAAATTCTTTAGAATTAGAACAATACTTTAAATTAGATTTAAGATGGAAT  1050

seq1  GCTTCAAGTA-TTTTAAGAAAACC-AATTCTTC-TTTTGTCCATTTATAT  1090
      |||||||||| ||||||||||||| ||| |||| ||||||||||||||||
seq2  GCTTCAAGTATTTTTAAGAAAACCAAATCCTTCTTTTTGTCCATTTATAT  1100

seq1  TCCTAAGAGTTCTGATTAAT--ATTTTCA-TTTTGGCTCAGTTCTCATCA  1137
      ||||||||||||||||||||   |||||| ||||| |||||||||| || 
seq2  TCCTAAGAGTTCTGATTAATTATTTTTCATTTTTGCCTCAGTTCTC-TC-  1148

seq1  ATAAAAGATTCAAGA  1152
      || ||||||||||||
seq2  ATTAAAGATTCAAGA  1163

seq1: chr2_62556155_62557317
seq2: B6Ng01-075F12.g_69_1231 (reverse)

seq1  AAAAGAG-CCTAGTGATGCCAGGGATAGTCCCAGC-TTGTTTTCTAATAT  48
      ||||||| ||||||||||||| ||||||| ||||| |||||||| |||||
seq2  AAAAGAGCCCTAGTGATGCCA-GGATAGT-CCAGCTTTGTTTTC-AATAT  47

seq1  CCATTT-CATATAGGAACACTTCTTTAGAGAGAA-TGAGAACTGATAGCA  96
      |||||| |||||| |||||||||||  ||||||| |||||||||||||||
seq2  CCATTTCCATATA-GAACACTTCTTAGGAGAGAATTGAGAACTGATAGCA  96

seq1  TTGAAA-GCTATGTTACATTCTCATGAGCTTTGTGCCGGAAACCTCATTG  145
      |||||| ||||||| |||||||||||||||||||||||||||||||||  
seq2  TTGAAAGGCTATGTAACATTCTCATGAGCTTTGTGCCGGAAACCTCATGA  146

seq1  AATTTGTGCCTCTGCTTAGCAGCACGTTCATTTTACAATCATGTAACACA  195
      ||||||  | |||||| |||||||||||||||||||||||||   |||||
seq2  AATTTG-CCTTCTGCTAAGCAGCACGTTCATTTTACAATCATTGTACACA  195

seq1  TTGATTTTTAAACACCACT-GGTGAATCACATGTGATAAATT-ATGGAGG  243
      |||| |||||||||||||| |||||||||||||| ||||||| |||||||
seq2  TTGA-TTTTAAACACCACTGGGTGAATCACATGT-ATAAATTAATGGAGG  243

seq1  ATAGCATTTTTCTTTGACCCTTAAGGAAAAAAAAAGATTTTCTTAGCAGA  293
      |||||| | ||  |||||||||||||||||||||||||||||||||||||
seq2  ATAGCAATATTTCTTGACCCTTAAGGAAAAAAAAAGATTTTCTTAGCAGA  293

seq1  AATGAATAAAACGTGTACTGTGAGATTGAGGTTTCCTTGACTATAATTTA  343
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AATGAATAAAACGTGTACTGTGAGATTGAGGTTTCCTTGACTA-AATTTA  342

seq1  ATTTTTAATTGAAATTTAGAGATATGTGATTAACTTGTTTTAATGGTGGA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAATTGAAATTTAGAGATATGTGATTAACTTGTTTTAATGGTGGA  392

seq1  ATGAAAAATAAAAGAGTTCAAAGAGGG-AAACCCTGGTTAGTCGTCCTAA  442
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATGAAAAATAAAAGAGTTCAAAGAGGGAAAACCCTGGTTAGTCGTCCTAA  442

seq1  TCAAATGAGCATCCTTGTAGACACCTTCTAAAAATAGCTCAGACAGTATC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGAGCATCCTTGTAGACACCTTCTAAAAATAGCTCAGACAGTATC  492

seq1  TGCACTTGGTTGCCTTGGAAAATGTTGCTATAGTTGCAAGACACACTTCT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTTGGTTGCCTTGGAAAATGTTGCTATAGTTGCAAGACACACTTCT  542

seq1  GCAAATGGGTGAGCAGTGGGTAAACCTTCATTTTCAGGGTTCACAGTTTC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGGGTGAGCAGTGGGTAAACCTTCATTTTCAGGGTTCACAGTTTC  592

seq1  ACCAGAGTCTACATTTGACCTCAGCATTAGGAAGGCCAAAGTCATCTTAA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAGTCTACATTTGACCTCAGCATTAGGAAGGCCAAAGTCATCTTAA  642

seq1  TTTCTTTTCTCTTTTAAGTTTTGCTTAAATGAGTCCTTCTTTGGAATGAC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTCTCTTTTAAGTTTTGCTTAAATGAGTCCTTCTTTGGAATGAC  692

seq1  AAGTACCAGAATACAAGGGAGTGAAATTGACTATTAATAATGAAACTAAA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACCAGAATACAAGGGAGTGAAATTGACTATTAATAATGAAACTAAA  742

seq1  CTGTTAGAGTCCCGTAGTTCAAACTGCAGTAGCTATGTCTATATCTAGAA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAGAGTCCCGTAGTTCAAACTGCAGTAGCTATGTCTATATCTAGAA  792

seq1  TTGTACTTACATATTGGAGCTCATTACTATTATATAGTATTGCACTTAGA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACTTACATATTGGAGCTCATTACTATTATATAGTATTGCACTTAGA  842

seq1  CTCTTACTGGGGAATGATCTTTGCATGAATCATGTTTTAAAATTCTTCAT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTACTGGGGAATGATCTTTGCATGAATCATGTTTTAAAATTCTTCAT  892

seq1  TGGTTAATTATAATGATGAGTTATGTTAAGTGTATGTCATTTTGATGGGG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAATTATAATGATGAGTTATGTTAAGTGTATGTCATTTTGATGGGG  942

seq1  GCTTTATGTCATCCGTTTCCTTTGTCAATAGACATGCATATTTAGCCCCT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATGTCATCCGTTTCCTTTGTCAATAGACATGCATATTTAGCCCCT  992

seq1  CATTATCAAGATAATTATTCATGACTTGAATGTGGATTACTTTCTACATT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATCAAGATAATTATTCATGACTTGAATGTGGATTACTTTCTACATT  1042

seq1  TTTGAAAACATGGATGTTTGGAGATGCTAAAATCATTTGAAAATATAATT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAACATGGATGTTTGGAGATGCTAAAATCATTTGAAAATATAATT  1092

seq1  GGTTGGGCATAGACAAGAGTTAATTAAAAGTTGGAAGAAGTGAGATTATA  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGGCATAGACAAGAGTTAATTAAAAGTTGGAAGAAGTGAGATTATA  1142

seq1  AAATGAAGGGCATTTGAATTC  1163
      |||||||||||||||||||||
seq2  AAATGAAGGGCATTTGAATTC  1163