BAC Information

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BAC

Clone NameB6Ng01-075G10
Chromosome2 (Build37)
Map Location 50,516,152 - 50,644,376
singlet/doubletdoublet
Overlap genenone
Upstream geneKif5c, 2310010M24Rik, Lypd6, 2010311D03Rik, LOC666781
Downstream geneLOC227885, Rnd3, LOC666802, LOC666810, LOC100041614, Tas2r134, LOC433426
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075G10.bB6Ng01-075G10.g
ACCDH891973DH891974
length207978
definitionDH891973|Mus musculus domesticus DNA, BAC clone: B6Ng01-075G10, 5' end.DH891974|Mus musculus domesticus DNA, BAC clone: B6Ng01-075G10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,516,152 - 50,516,357)(50,643,398 - 50,644,376)
sequence
acatgatgtgaattcacttgtatcgaatttggaaagtagtaacagtgaat
gagtgataaaattacaaataaaagtatgaaagattaactaaaaattcagg
ttatttctggatcataatactaccatgatagtcaatttttaaaaattctt
tgtgtgttgtggggggcatcccataggtttatacaggtgtgtgtgtgtgt
gagtgtg
gaattctgtattggaagttttctcataatatttttatttatggtttaaca
gccctttaatgctttttatgtaatgagattgaactaaattaacttggaac
taatttttttttttttataaatttccttgatgtggactggatgcatactc
aagagtgactatatataactacaacgtttacagaatattatagttgacac
aatttaaagttttagcttcatttagaaatagtgtagttataagaccattc
caatactcttcattaactaataacttgtgtttccaaccatttcacccggt
cagaagataatgaaaaaaatcaggaaaaaacacatggccatcaggtagat
aaaacagacatatcaaagcatgctgtctgtgtttcttattgatcacttca
ggctttacctaaggggtcatttgttcttaatttatgcacaattacaatga
tatcttttgtgatggtttgtatatgcttagcccagggagtggcactatta
ggaggtatggccttgttggagtaggtgtatcactgagggagtgggcttta
agactctcttcctagctgcttctcttcctagctgctttgaaaccagtgtt
ctcctaacagacttcaactcctcctgcaccatgcctgcctggatgctgcc
atgctcccactttgatataatggtctgaacctctgaacctgtaagccagc
cctaattaaatgttcttataagagttgccttggtcatggtatctgtttca
tagcagtaaaaccccaactaagacatctttcaaactcatagagggagagg
aagaacatgagttggagattggaggaatggtatagaagccacatacaaag
cagtgagaaagaaagctatgggagagaccacagaagcaaagggaaatcat
ggcatgtggatgaaaggaacagaaaaatccacaccaaacatgggcacctg
aatttcaacaaaccaaaaacacacctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_50516152_50516357
seq2: B6Ng01-075G10.b_53_259

seq1  ACATGATGTGAATTCACTTGTAT-GAATTTGGAAAGTAGTAACAGTGAAT  49
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACATGATGTGAATTCACTTGTATCGAATTTGGAAAGTAGTAACAGTGAAT  50

seq1  GAGTGATAAAATTACAAATAAAAGTATGAAAGATTAACTAAAAATTCAGG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGATAAAATTACAAATAAAAGTATGAAAGATTAACTAAAAATTCAGG  100

seq1  TTATTTCTGGATCATAATACTACCATGATAGTCAATTTTTAAAAATTCTT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCTGGATCATAATACTACCATGATAGTCAATTTTTAAAAATTCTT  150

seq1  TGTGTGTTGTGGGGGGCATCCCATAGGTTTATACAGGTGTGTGTGTGTGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTGTGGGGGGCATCCCATAGGTTTATACAGGTGTGTGTGTGTGT  200

seq1  GAGTGTG  206
      |||||||
seq2  GAGTGTG  207

seq1: chr2_50643398_50644376
seq2: B6Ng01-075G10.g_69_1046 (reverse)

seq1  TATGGTGTGTTCTTGGTTTGTTGAAATTCAGGTGCCCATGTTT-GTGTGG  49
      || |||||||| ||||||||||||||||||||||||||||||| ||||||
seq2  TAAGGTGTGTTTTTGGTTTGTTGAAATTCAGGTGCCCATGTTTGGTGTGG  50

seq1  AATTTTTTCTGTTCCTTTCATCCACATGCCATGATTTCCCTTTGCTTCTG  99
      |  |||||||||||||||||||||||||||||||||||||||||||||||
seq2  A--TTTTTCTGTTCCTTTCATCCACATGCCATGATTTCCCTTTGCTTCTG  98

seq1  TGGTCTCTCCCATAGCTTTCTTTCTCACTGCTTTGTATGTGGCTTCTATA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTCTCCCATAGCTTTCTTTCTCACTGCTTTGTATGTGGCTTCTATA  148

seq1  CCATTCCTCCAATCTCCAACTCATGTTCTTCCTCTCCCTCTATGAGTTTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCCTCCAATCTCCAACTCATGTTCTTCCTCTCCCTCTATGAGTTTG  198

seq1  AAAGATGTCTTAGTTGGGGTTTTACTGCTATG-AACAGATACCATGACCA  248
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAAGATGTCTTAGTTGGGGTTTTACTGCTATGAAACAGATACCATGACCA  248

seq1  AGGCAACTCTTATAAGAACATTTAATTAGGGCTGGCTTACAGGTTCAGAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACTCTTATAAGAACATTTAATTAGGGCTGGCTTACAGGTTCAGAG  298

seq1  GTTCAGACCATTATTATCAAAGTGGGAGCATGGCAGCATCCAGGCAGGCA  348
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTTCAGACCATTA-TATCAAAGTGGGAGCATGGCAGCATCCAGGCAGGCA  347

seq1  TGGTGCAGGAGGAGTTGAAGTCTGTTAGGAGAACACTGGTTTCAAAGCAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCAGGAGGAGTTGAAGTCTGTTAGGAGAACACTGGTTTCAAAGCAG  397

seq1  CTAGGAAGAGAAGCAGCTAGGAAGAGAGTCTTAAAGCCCACTCCCTCAGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAAGAGAAGCAGCTAGGAAGAGAGTCTTAAAGCCCACTCCCTCAGT  447

seq1  GATACACCTACTCCAACAAGGCCATACCTCCTAATAGTGCCACTCCCTGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACACCTACTCCAACAAGGCCATACCTCCTAATAGTGCCACTCCCTGG  497

seq1  GCTAAGCATATACAAACCATCACAAAAGATATCATTGTAATTGTGCATAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGCATATACAAACCATCACAAAAGATATCATTGTAATTGTGCATAA  547

seq1  ATTAAGAACAAATGACCCCTTAGGTAAAGCCTGAAGTGATCAATAAGAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAACAAATGACCCCTTAGGTAAAGCCTGAAGTGATCAATAAGAAA  597

seq1  CACAGACAGCATGCTTTGATATGTCTGTTTTATCTACCTGATGGCCATGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACAGCATGCTTTGATATGTCTGTTTTATCTACCTGATGGCCATGT  647

seq1  GTTTTTTCCTGATTTTTTTCATTATCTTCTGACCGGGTGAAATGGTTGGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTCCTGATTTTTTTCATTATCTTCTGACCGGGTGAAATGGTTGGA  697

seq1  AACACAAGTTATTAGTTAATGAAGAGTATTGGAATGGTCTTATAACTACA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAGTTATTAGTTAATGAAGAGTATTGGAATGGTCTTATAACTACA  747

seq1  CTATTTCTAAATGAAGCTAAAACTTTAAATTGTGTCAACTATAATATTCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCTAAATGAAGCTAAAACTTTAAATTGTGTCAACTATAATATTCT  797

seq1  GTAAACGTTGTAGTTATATATAGTCACTCTTGAGTATGCATCCAGTCCAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACGTTGTAGTTATATATAGTCACTCTTGAGTATGCATCCAGTCCAC  847

seq1  ATCAAGGAAATTTATAAAAAAAAAAAAATTAGTTCCAAGTTAATTTAGTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGGAAATTTATAAAAAAAAAAAAATTAGTTCCAAGTTAATTTAGTT  897

seq1  CAATCTCATTACATAAAAAGCATTAAAGGGCTGTTAAACCATAAATAAAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTCATTACATAAAAAGCATTAAAGGGCTGTTAAACCATAAATAAAA  947

seq1  ATATTATGAGAAAACTTCCAATACAGAATTC  979
      |||||||||||||||||||||||||||||||
seq2  ATATTATGAGAAAACTTCCAATACAGAATTC  978