BAC Information

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BAC

Clone NameB6Ng01-075J19
Chromosome2 (Build37)
Map Location 68,301,546 - 68,302,706
singlet/doubletsinglet
Overlap geneStk39
Upstream geneCmya3, LOC621171, LOC227995, B3galt1
Downstream geneLOC100039683, Gm1323, 4933409G03Rik, 4932414N04Rik, LOC667443, Lass6, Nostrin, Spc25, G6pc2, Abcb11, Dhrs9, Lrp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075J19.bB6Ng01-075J19.g
ACCDH892123DH892124
length1,1631,157
definitionDH892123|Mus musculus domesticus DNA, BAC clone: B6Ng01-075J19, 5' end.DH892124|Mus musculus domesticus DNA, BAC clone: B6Ng01-075J19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatacctaaggactgagaaccacttgaaaaaatg
ttcaacattcttaattatcagggaaatgcaaatcaaaacaatcctgagat
tccacctcacaccagtcagaatggctaggatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccactgctggtg
ggattgcaagctggtacaagcactctggaagtcagactggaggttcctca
gaaaattggacatagtactaccggaagatccagcaatacttctcctgggc
atatacccagaagatgttccaactggtaataaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctaaacagaggaatggatacagaaaatatggtacatttatacaatg
gagtactactagctattaaaaacaatgaatttatgaaattcttgggcaaa
tggatgtctctagaggatatcatcctgagtgaggtaacccaatcacaaaa
gaagtcacttgatatgcactcactgataattggatattaacctagaatac
ccaagatacaacttccaaaacacaaaaaaatcaagaaggaagaccaatgt
gtggatacttcattcctccctagaatagggaataaaatatccatggaagg
agttgcagagacaaagtttggagctaagatgaaaggatggaccattcaga
gactgccccacccgggggtccatcccataatcagccaccaaatgcagaca
ctattgcatacgccagcaagattttgctgaaaggaccctgatatagctgt
ctcgtgtgaggctttgccagtgcctggcaaatacagaagtggatgctcac
agtcatctataggatggaacacagggcccccagtgtaggggctagagaaa
atacccagagctgaaggggtctgcaaccctataggtagacacatattact
accagtaccctcagagctagtgtctctagatgcatatatagcagaagatg
gctagttggcatcatggaagatagtccttggtctagcaacttattgccca
gtacaggaaacgtcagtgcagatggggagtgattgggtaaggggacaatg
ctctgtgatatgt
gaattctactgaaatgagaaaaggacctcgtttccaaaagatacacacac
aatagttaaagcaggcattagatgaggtctgacttacaaatcgagctgaa
cgctgcagtcttggcatgcaccacccccttccccttccatcactctctgt
ccactgcaggctacaagggtgtcactcctgtctgcatgtctaaccctgga
gtctcacggtcctgcaattctgctcttgcatttcatccgactctcatctc
cattatttctcatttctgtgcagtaagcgacgccaaggaacttcaaggca
agggttatatttaaacacccgaacagcaagagatcactgttgcactcaaa
gaaggaagggagtactgggctcccaagaggtgtggcatgggacaccctta
ctcctaccatcaggcaagcctctagcccacgtgggccacttccaggttcc
ataaatcaggagggggagcctctgccccgcaccccaacataggcaggtgg
aagcactaaaggagctccctagtgatcatcagggttgagttgctatctac
agagtccttaaagctgattggcccaaggtcagctaactgagcaagaacca
tcaaaggcaggatcaaaccctcagggtcaaagaaggcaaactcagatggc
aggcagtgacatctgtccccagaattcgggcttgtagccagaaaacaagg
atcaaatactgcatacgatgtgtgtggtgtgggagaagctctgaccatcc
aaggccaggatgaaccctcagaaaactgtccttccaagaaaggaggtgag
agacaggacaggaccagtggagggaggccagaagagctaagggcacaaac
tgtttctgtgaggagaaatcattttttttcctgaattttaaaagcatcca
aagcagaggtgacacaaaagaggacaacacagtgctaactgcacacgctt
acttaatgtagaccaggcaccaacacacatgtagcttacacacgcacttt
ctttccagtgtgttcaactgcacgggtacacgttcaacatgcatgtttgt
actgcaagagaataaggactaaaatgaaaacctagaactttgggcacaca
gaccagtgttccaagaaaagaagactgcccaaccaaggcagggaagggga
agctttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_68301546_68302706
seq2: B6Ng01-075J19.g_68_1224

seq1  GAATTCTACTGAAATGAGAAAAGGACCTCGTTTCCAAAAGATACACACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTGAAATGAGAAAAGGACCTCGTTTCCAAAAGATACACACAC  50

seq1  AATAGTTAAAGCAGGCATTAGATGAGGTCTGACTTACAAATCGAGCTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTAAAGCAGGCATTAGATGAGGTCTGACTTACAAATCGAGCTGAA  100

seq1  CGCTGCAGTCTTGGCATGCACCACCCCCTTCCCCTTCCATCACTCTCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGCAGTCTTGGCATGCACCACCCCCTTCCCCTTCCATCACTCTCTGT  150

seq1  CCACTGCAGGCTACAAGGGTGTCACTCCTGTCTGCATGTCTAACCCTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGCAGGCTACAAGGGTGTCACTCCTGTCTGCATGTCTAACCCTGGA  200

seq1  GTCTCACGGTCCTGCAATTCTGCTCTTGCATTTCATCCGACTCTCATCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCACGGTCCTGCAATTCTGCTCTTGCATTTCATCCGACTCTCATCTC  250

seq1  CATTATTTCTCATTTCTGTGCAGTAAGCGACGCCAAGGAACTTCAAGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTTCTCATTTCTGTGCAGTAAGCGACGCCAAGGAACTTCAAGGCA  300

seq1  AGGGTTATATTTAAACACCCGAACAGCAAGAGATCACTGTTGCACTCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTATATTTAAACACCCGAACAGCAAGAGATCACTGTTGCACTCAAA  350

seq1  GAAGGAAGGGAGTACTGGGCTCCCAAGAGGTGTGGCATGGGACACCCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAGGGAGTACTGGGCTCCCAAGAGGTGTGGCATGGGACACCCTTA  400

seq1  CTCCTACCATCAGGCAAGCCTCTAGCCCACGTGGGCCACTTCCAGGTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTACCATCAGGCAAGCCTCTAGCCCACGTGGGCCACTTCCAGGTTCC  450

seq1  ATAAATCAGGAGGGGGAGCCTCTGCCCCGCACCCCAACATAGGCAGGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCAGGAGGGGGAGCCTCTGCCCCGCACCCCAACATAGGCAGGTGG  500

seq1  AAGCACTAAAGGAGCTCCCTAGTGATCATCAGGGTTGAGTTGCTATCTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTAAAGGAGCTCCCTAGTGATCATCAGGGTTGAGTTGCTATCTAC  550

seq1  AGAGTCCTTAAAGCTGATTGGCCCAAGGTCAGCTAACTGAGCAAGAACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCCTTAAAGCTGATTGGCCCAAGGTCAGCTAACTGAGCAAGAACCA  600

seq1  TCAAAGGCAGGATCAAACCCTCAGGGTCAAAGAAGGCAAACTCAGATGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGCAGGATCAAACCCTCAGGGTCAAAGAAGGCAAACTCAGATGGC  650

seq1  AGGCAGTGACATCTGTCCCCAGAATTCGGGCTTGTAGCCAGAAAACAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGTGACATCTGTCCCCAGAATTCGGGCTTGTAGCCAGAAAACAAGG  700

seq1  ATCAAATACTGCATACGATGTGTGTGGTGTGGGAGAAGCTCTGACCATCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATACTGCATACGATGTGTGTGGTGTGGGAGAAGCTCTGACCATCC  750

seq1  AAGGCCAGGATGAACCCTCAGAAAACTGTCCTTCCAAGAAAGGAGGTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCAGGATGAACCCTCAGAAAACTGTCCTTCCAAGAAAGGAGGTGAG  800

seq1  AGACAGGACAGGACCAGTGGAGGGAGGCCAGAAGAGCTAAGGGCACAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGACAGGACCAGTGGAGGGAGGCCAGAAGAGCTAAGGGCACAAAC  850

seq1  TGTTTCTGTGAGGAGAAATCATTTTTTTTCCTGAATTTTAAAAGCATCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTGTGAGGAGAAATCATTTTTTTTCCTGAATTTTAAAAGCATCCA  900

seq1  AAGCAGAGGTGACACAAAAGAGGACAACACAGTGCTAACTGCACACGCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAGGTGACACAAAAGAGGACAACACAGTGCTAACTGCACACGCTT  950

seq1  ACTTAATGTAAGAACAGGCACCAACACACATGTAGCTTACACACGCAC-T  999
      ||||||||| ||| |||||||||||||||||||||||||||||||||| |
seq2  ACTTAATGT-AGACCAGGCACCAACACACATGTAGCTTACACACGCACTT  999

seq1  TCTTTCCAGTGTGTTC-ACTGCACGGGTACACGTTCAACATGCATG-TTG  1047
      |||||||||||||||| ||||||||||||||||||||||||||||| |||
seq2  TCTTTCCAGTGTGTTCAACTGCACGGGTACACGTTCAACATGCATGTTTG  1049

seq1  TACTGCAAGAGAATAA-GACTAAAAAGGAGAAACCCAGAACTTAGGGCAC  1096
      |||||||||||||||| |||||||| |   ||||| ||||||| ||||||
seq2  TACTGCAAGAGAATAAGGACTAAAATG--AAAACCTAGAACTTTGGGCAC  1097

seq1  ACAGACACAGTGTTCCAAAGAAAAGAAGACTGCCCAGCAGAGGCAGGGGA  1146
      |||||| ||||||||| ||||||||||||||||||| |  |||||||| |
seq2  ACAGAC-CAGTGTTCC-AAGAAAAGAAGACTGCCCAACCAAGGCAGGGAA  1145

seq1  GGGTGGAAGCATTTC  1161
      ||  |||||| ||||
seq2  GG--GGAAGC-TTTC  1157