BAC Information

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BAC

Clone NameB6Ng01-075L02
Chromosome2 (Build37)
Map Location 167,843,719 - 167,998,647
singlet/doubletdoublet
Overlap genePard6b
Upstream geneDdx27, AI481105, 1500012F01Rik, LOC668950, Kcnb1, Ptgis, LOC668951, B4galt5, Slc9a8, Spata2, Zfp313, Snai1, Ube2v1, AI840826, Cebpb, LOC100043728, Ptpn1, 2310033K02Rik
Downstream geneAdnp, Dpm1, Mocs3, LOC100043908, Kcng1, LOC668952, Nfatc2, Atp9a, Sall4, Zfp64, LOC100043909
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075L02.bB6Ng01-075L02.g
ACCDH892181DH892182
length764653
definitionDH892181|Mus musculus domesticus DNA, BAC clone: B6Ng01-075L02, 5' end.DH892182|Mus musculus domesticus DNA, BAC clone: B6Ng01-075L02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(167,843,719 - 167,844,481)(167,997,996 - 167,998,647)
sequence
gaattctgggccagcctgagttacagagggagaccttatctcgaacaaca
gcaagtcagcaagtcaaagtgggtctgggagaactgtgtctggcaagcct
agcctgtcgtgcaagctaacccagaggccgaggcaagacgatgccaagtt
taacagtgtgatgaacataggaagaccctgtcccaggataacgtttaaaa
gctgagtggctgtatccatacgctagtggcaggatgcttgcacaaaaccc
tggactcattacttagtaggggtctggtggtacagtcctgtaaagaagag
tcaggagttcaaggccagcctgagctacatacagaattcaaggccagcct
gagctacatgagacccatctcaaaacaaacgacaaaaaccccaattaaaa
gaaaaagaagagccgggcggtggtggcggcggcacacgctttaatcccag
cactcgggaggcagaggcaggcgaatttctgagttcgaggccagcctggt
ctacagagtgagtaccaggacagccagaactatacagagaaaccctgtct
caaaaaaaaaaaaaaaaaaaaaaaaataaagaaagaaagaaagaaagaaa
agaaaagaaaagataaaggcaggctggagagatggttcagtggtaagagc
actgattgctcttcctatggtcctgattcaatttcccatcattttctggg
tggctctcaaccatctgtaatgaaatctgataccctcttctgggtggggt
ttgaagacaactac
gaattcccgatgcctagcccaggtggaagctttgtaaggggacctggaag
gcagggataagaacaagaaggccatctgcagaagagatggcctaacacct
agggacagggacctgtgaaggcccagcctgccttggccaggaagagtggc
ctgcaagaaacactaacacgggagaaaagggacacttagtctgcacgagt
cccagctggaccactagagagctcttgacacctttattggggtgactaac
atggcagggtcaagctgagatctgcctgcaacacccctccctgcaggcct
tagggactggcagaaggtgccttgcaggctgattctggcactgctccttc
gtgagatctcatggctgctttgcacagctcaagggagcaagagaaccaac
ccagcagctcctgtgcagtccctctgcaccctggcatgctaacagtcaag
gggctctcaggctttgcccctccaagcacccatgggaagatagcccttcg
tcctgtacagcttgggcagcccgtctgtcatgggtgctggcactgctggc
tcctggaatgagaaaagccaagatgtcatgtcacaacagggatccacggg
ctccggtgccaggagtttacccaccaccaatggagagtctctacctgacc
agg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_167843719_167844481
seq2: B6Ng01-075L02.b_44_807

seq1  GAATTCTGGGCCAGCCTGAGTTACAGAGGGAGACCTTATCTCGAACAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGCCAGCCTGAGTTACAGAGGGAGACCTTATCTCGAACAACA  50

seq1  GCAAGTCAGCAAGTCAAAGTGGGTCTGGGAGAACTGTGTCTGGCAAGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTCAGCAAGTCAAAGTGGGTCTGGGAGAACTGTGTCTGGCAAGCCT  100

seq1  AGCCTGTCGTGCAAGCTAACCCAGAGGCCGAGGCAAGACGATGCCAAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGTCGTGCAAGCTAACCCAGAGGCCGAGGCAAGACGATGCCAAGTT  150

seq1  TAACAGTGTGATGAACATAGGAAGACCCTGTCCCAGGATAACGTTTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTGTGATGAACATAGGAAGACCCTGTCCCAGGATAACGTTTAAAA  200

seq1  GCTGAGTGGCTGTATCCATACGCTAGTGGCAGGATGCTTGCACAAAACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTGGCTGTATCCATACGCTAGTGGCAGGATGCTTGCACAAAACCC  250

seq1  TGGACTCATTACTTAGTAGGGGTCTGGTGGTACAGTCCTGTAAAGAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTCATTACTTAGTAGGGGTCTGGTGGTACAGTCCTGTAAAGAAGAG  300

seq1  TCAGGAGTTCAAGGCCAGCCTGAGCTACATACAGAATTCAAGGCCAGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAGTTCAAGGCCAGCCTGAGCTACATACAGAATTCAAGGCCAGCCT  350

seq1  GAGCTACATGAGACCCATCTCAAAACAAACGACAAAAACCCCAATTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTACATGAGACCCATCTCAAAACAAACGACAAAAACCCCAATTAAAA  400

seq1  GAAAAAGAAGAGCCGGGCGGTGGTGGCGGCGGCACACGCTTTAATCCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGAAGAGCCGGGCGGTGGTGGCGGCGGCACACGCTTTAATCCCAG  450

seq1  CACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCGAGGCCAGCCTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCGGGAGGCAGAGGCAGGCGAATTTCTGAGTTCGAGGCCAGCCTGGT  500

seq1  CTACAGAGTGAGTACCAGGACAGCCAGAACTATACAGAGAAACCCTGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGAGTGAGTACCAGGACAGCCAGAACTATACAGAGAAACCCTGTCT  550

seq1  CAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAA  600
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CAAAAAAAAAAAAAAAAAAAAAAAAATAAAGAAAGAAAGAAAGAAAGAAA  600

seq1  AGAAAAGAAAAGATAAAGGCAGGCTGGAGAGATGGCTCAGTGGGTAAGAG  650
      ||||||||||||||||||||||||||||||||||| ||||| ||||||||
seq2  AGAAAAGAAAAGATAAAGGCAGGCTGGAGAGATGGTTCAGT-GGTAAGAG  649

seq1  CACTGATTGCTCTTCCAAAGGTCCTGAGTTCAA-ATCCCAGCAACTACAT  699
      |||||||||||||||| | |||||||| |||||  ||||| ||  | |  
seq2  CACTGATTGCTCTTCCTATGGTCCTGA-TTCAATTTCCCATCATTTTCTG  698

seq1  GGTGGCTCACAACCATCTGTAATGAGATCTGATACCCTCTTCTGG--TGC  747
      |||||||| |||||||||||||||| |||||||||||||||||||   | 
seq2  GGTGGCTCTCAACCATCTGTAATGAAATCTGATACCCTCTTCTGGGTGGG  748

seq1  GTTTGAAGACAACTAC  763
      ||||||||||||||||
seq2  GTTTGAAGACAACTAC  764

seq1: chr2_167997996_167998647
seq2: B6Ng01-075L02.g_68_720 (reverse)

seq1  CCTGGTCAGGTAGAGACTCTCCATTGGTGGTGGGT-AACTCCTGGCACCG  49
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCTGGTCAGGTAGAGACTCTCCATTGGTGGTGGGTAAACTCCTGGCACCG  50

seq1  GAGCCCGTGGATCCCTGTTGTGACATGACATCTTGGCTTTTCTCATTCCA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCGTGGATCCCTGTTGTGACATGACATCTTGGCTTTTCTCATTCCA  100

seq1  GGAGCCAGCAGTGCCAGCACCCATGACAGACGGGCTGCCCAAGCTGTACA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCAGCAGTGCCAGCACCCATGACAGACGGGCTGCCCAAGCTGTACA  150

seq1  GGACGAAGGGCTATCTTCCCATGGGTGCTTGGAGGGGCAAAGCCTGAGAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGAAGGGCTATCTTCCCATGGGTGCTTGGAGGGGCAAAGCCTGAGAG  200

seq1  CCCCTTGACTGTTAGCATGCCAGGGTGCAGAGGGACTGCACAGGAGCTGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTGACTGTTAGCATGCCAGGGTGCAGAGGGACTGCACAGGAGCTGC  250

seq1  TGGGTTGGTTCTCTTGCTCCCTTGAGCTGTGCAAAGCAGCCATGAGATCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTGGTTCTCTTGCTCCCTTGAGCTGTGCAAAGCAGCCATGAGATCT  300

seq1  CACGAAGGAGCAGTGCCAGAATCAGCCTGCAAGGCACCTTCTGCCAGTCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAAGGAGCAGTGCCAGAATCAGCCTGCAAGGCACCTTCTGCCAGTCC  350

seq1  CTAAGGCCTGCAGGGAGGGGTGTTGCAGGCAGATCTCAGCTTGACCCTGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGCCTGCAGGGAGGGGTGTTGCAGGCAGATCTCAGCTTGACCCTGC  400

seq1  CATGTTAGTCACCCCAATAAAGGTGTCAAGAGCTCTCTAGTGGTCCAGCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTAGTCACCCCAATAAAGGTGTCAAGAGCTCTCTAGTGGTCCAGCT  450

seq1  GGGACTCGTGCAGACTAAGTGTCCCTTTTCTCCCGTGTTAGTGTTTCTTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTCGTGCAGACTAAGTGTCCCTTTTCTCCCGTGTTAGTGTTTCTTG  500

seq1  CAGGCCACTCTTCCTGGCCAAGGCAGGCTGGGCCTTCACAGGTCCCTGTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCACTCTTCCTGGCCAAGGCAGGCTGGGCCTTCACAGGTCCCTGTC  550

seq1  CCTAGGTGTTAGGCCATCTCTTCTGCAGATGGCCTTCTTGTTCTTATCCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGTGTTAGGCCATCTCTTCTGCAGATGGCCTTCTTGTTCTTATCCC  600

seq1  TGCCTTCCAGGTCCCCTTACAAAGCTTCCACCTGGGCTAGGCATCTGGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGCCTTCCAGGTCCCCTTACAAAGCTTCCACCTGGGCTAGGCATCGGGAA  650

seq1  TTC  652
      |||
seq2  TTC  653