BAC Information

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BAC

Clone NameB6Ng01-075N04
Chromosome2 (Build37)
Map Location 77,272,841 - 77,328,624
singlet/doubletdoublet
Overlap geneZfp533
Upstream geneOsbpl6, Prkra, Dfnb59, Fkbp7, Plekha3, Ttn, 2610301F02Rik, Sestd1, LOC623706, LOC667906
Downstream geneBC003993, LOC667920, OTTMUSG00000016703
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075N04.bB6Ng01-075N04.g
ACCDH892273DH892274
length1,1331,159
definitionDH892273|Mus musculus domesticus DNA, BAC clone: B6Ng01-075N04, 5' end.DH892274|Mus musculus domesticus DNA, BAC clone: B6Ng01-075N04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,327,481 - 77,328,624)(77,272,841 - 77,273,999)
sequence
gaattcaggaaagctggctaaaggatcttttcagtggaggctagggagaa
aaaaacataccatgaatttgattgtactctgtctttctttacaattactt
gggaagctgagaactgtttacctgtgagactttgtcattgatccctaaga
tgatggtgtttgcagttataatttaaaaatgattttggaacctttggttc
acattgttcattagtcaaaccacaactaggccaatggccacttaagaagt
gatttaactgagtcccgaaacagtcaacctaccaggtgagccttcacgta
ctgataatgaacttttattccgagaacttcctcagccctctgctgtttcc
taacagcccccccctctcctgcttcccttccccagatacattctttcctg
aatgtaaatcacttcacccaaactctgagtaattacaactcactgggttc
catcttaagtatgacacaaacttttagggtaagtatatgtgcataacaat
ttttttcctcagaataaaaatatctgcgcaaataaaaatttatcagcaag
atatgtactagccatagctagtaggagcagcagaaaaatgcaccagtctt
tggacttttgtaagttaaaactgatatattttttttaatcagttatttca
aaaacgaaactttttagaaagacagtatgtaccacacagctgatgagtcc
cggtgcaatcagacgctccattgtcttcggagagagcagccgtctctcag
gcctggcccccataatggatgactagctctcgtgacccccagatgtggag
ttctttgaagctacacgtctggggaacagtccttttgttacggtgcaaga
gcaatatcagaatttcctgggagtgggtcatcacaggaaattatcagcaa
ttcatagactttcctttttgcgttcacttcagcctcaagggtaatcacaa
aagattatagtctccatttcagctttcacatctctgaaatattctctctg
ctgagaacatgattgattcccagaggacagctttaacctagcttaggagg
ctggtcaactcaagtattttggatacgcaggcatgagctggggatggcct
ttgttgtttgggggacttaatgattccctaaca
gaattctgggaactgaactctggtcctttagaagaccagtaagtgctctt
aacgcctgactcatctctccagcctctgtatctgcaacggttagtgccag
ttcaagttgaagctttcctcttatcaatggatctgttagatttatgatag
ttataaaaacaacaaaaaatgcatttgtgacaggtttgatgttttaatgc
ttgataaaatgaatgaatcattatgtactctgttagcaatgccgcacagc
atgcatataggtaaacagtgctgatagttgatagggctgtagacagatga
aggactgcctgtaggtgtcctgccagaagcacacatggaggcttggaggt
tgtggtgaacctacagctccgacattcctggtaaaagctagctcactggg
aaaccatacagaacaggagaatgctagggactggcataaaccctagcaag
taaactctccgtgctcatgcaggagaactggcaagttcaccaacggcagg
ctgggctgcccctttcagcctggagataactggtgatccctccgctttgt
ggttgcttgtttgattattttttgctgctcttgtttttctagtatctttg
accttgttacactccctgcactctggcaaaatttcccacttatgaaacta
tctgtgttctgtctggagatacattagagagtcatgcctagcatctctct
cctcagggatgttctatgctgccaatattaacttgcaccatactactgtt
atttgcattttcaacaattatgtggctgatttattcatacaataatattc
tgaagaaattctaaggactaggtgctgtgccattatttgatttcctaaac
ctttcggtatcatcattgaagggcattatggaagctttgctatcttagag
ccataaccactcacaacctaattgaagtccccaaggcacacgactttata
atctggttgttggcctactgtgactcagcagatgggttttcttgtcagtc
atttagaattttccaagtagatgccctacttagattagaatcttagttca
aattgtccctgaagttcaccttggcagagtgttgtgtagagtggttattc
tccacatctactagctgatacttgctaactagtcaggagactcctctggc
ataagctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_77327481_77328624
seq2: B6Ng01-075N04.b_45_1177 (reverse)

seq1  TGTTAGGGAATCACTAAGTCCCCCCCAAACAACAAA-GCCATCCCCAAGC  49
      ||||||||||||| |||||  ||||||||||||||| ||||||||| |||
seq2  TGTTAGGGAATCATTAAGT--CCCCCAAACAACAAAGGCCATCCCC-AGC  47

seq1  TCAATGCCTGGCCGTTATCAAAATACTTGAGTTTGACCAGCCCTCCTAAA  99
      || |||||||  |||   ||||||||||||| |||||||| |||||| ||
seq2  TC-ATGCCTG--CGTATCCAAAATACTTGAG-TTGACCAG-CCTCCT-AA  91

seq1  GCTAGGGTTAAAAGCTGTCCTCTGGGAATCAATCATGTTCTCAGCAGAGA  149
      ||||||  | ||||||||||||||||||||||||||||||||||||||| 
seq2  GCTAGG--TTAAAGCTGTCCTCTGGGAATCAATCATGTTCTCAGCAGAG-  138

seq1  AGAATATTTCAGAGATGTGAAAGCTGAAATGGAGACTATAATCTTTTGTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATTTCAGAGATGTGAAAGCTGAAATGGAGACTATAATCTTTTGTG  188

seq1  ATTACCCTTGAGGCTGAAGTGAACGCAAAAAGGAAAGTCTATGAATTGCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCCTTGAGGCTGAAGTGAACGCAAAAAGGAAAGTCTATGAATTGCT  238

seq1  GATAATTTCCTGTGATGACCCACTCCCAGGAAATTCTGATATTGCTCTTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTTCCTGTGATGACCCACTCCCAGGAAATTCTGATATTGCTCTTG  288

seq1  CACCGTAACAAAAGGACTGTTCCCCAGACGTGTAGCTTCAAAGAACTCCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGTAACAAAAGGACTGTTCCCCAGACGTGTAGCTTCAAAGAACTCCA  338

seq1  CATCTGGGGGTCACGAGAGCTAGTCATCCATTATGGGGGCCAGGCCTGAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGGGGGTCACGAGAGCTAGTCATCCATTATGGGGGCCAGGCCTGAG  388

seq1  AGACGGCTGCTCTCTCCGAAGACAATGGAGCGTCTGATTGCACCGGGACT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGGCTGCTCTCTCCGAAGACAATGGAGCGTCTGATTGCACCGGGACT  438

seq1  CATCAGCTGTGTGGTACATACTGTCTTTCTAAAAAGTTTCGTTTTTGAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGCTGTGTGGTACATACTGTCTTTCTAAAAAGTTTCGTTTTTGAAA  488

seq1  TAACTGATTAAAAAAAATATATCAGTTTTAACTTACAAAAGTCCAAAGAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGATTAAAAAAAATATATCAGTTTTAACTTACAAAAGTCCAAAGAC  538

seq1  TGGTGCATTTTTCTGCTGCTCCTACTAGCTATGGCTAGTACATATCTTGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCATTTTTCTGCTGCTCCTACTAGCTATGGCTAGTACATATCTTGC  588

seq1  TGATAAATTTTTATTTGCGCAGATATTTTTATTCTGAGGAAAAAAATTGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAATTTTTATTTGCGCAGATATTTTTATTCTGAGGAAAAAAATTGT  638

seq1  TATGCACATATACTTACCCTAAAAGTTTGTGTCATACTTAAGATGGAACC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACATATACTTACCCTAAAAGTTTGTGTCATACTTAAGATGGAACC  688

seq1  CAGTGAGTTGTAATTACTCAGAGTTTGGGTGAAGTGATTTACATTCAGGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGTTGTAATTACTCAGAGTTTGGGTGAAGTGATTTACATTCAGGA  738

seq1  AAGAATGTATCTGGGGAAGGGAAGCAGGAGAGGGGGGGGCTGTTAGGAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGTATCTGGGGAAGGGAAGCAGGAGAGGGGGGGGCTGTTAGGAAA  788

seq1  CAGCAGAGGGCTGAGGAAGTTCTCGGAATAAAAGTTCATTATCAGTACGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGAGGGCTGAGGAAGTTCTCGGAATAAAAGTTCATTATCAGTACGT  838

seq1  GAAGGCTCACCTGGTAGGTTGACTGTTTCGGGACTCAGTTAAATCACTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTCACCTGGTAGGTTGACTGTTTCGGGACTCAGTTAAATCACTTC  888

seq1  TTAAGTGGCCATTGGCCTAGTTGTGGTTTGACTAATGAACAATGTGAACC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGGCCATTGGCCTAGTTGTGGTTTGACTAATGAACAATGTGAACC  938

seq1  AAAGGTTCCAAAATCATTTTTAAATTATAACTGCAAACACCATCATCTTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTCCAAAATCATTTTTAAATTATAACTGCAAACACCATCATCTTA  988

seq1  GGGATCAATGACAAAGTCTCACAGGTAAACAGTTCTCAGCTTCCCAAGTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCAATGACAAAGTCTCACAGGTAAACAGTTCTCAGCTTCCCAAGTA  1038

seq1  ATTGTAAAGAAAGACAGAGTACAATCAAATTCATGGTATGTTTTTTTCTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAAAGAAAGACAGAGTACAATCAAATTCATGGTATGTTTTTTTCTC  1088

seq1  CCTAGCCTCCACTGAAAAGATCCTTTAGCCAGCTTTCCTGAATTC  1144
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCCTCCACTGAAAAGATCCTTTAGCCAGCTTTCCTGAATTC  1133

seq1: chr2_77272841_77273999
seq2: B6Ng01-075N04.g_68_1226

seq1  GAATTCTGGGAACTGAACTCTGGTCCTTTAGAAGACCAGTAAGTGCTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGAACTGAACTCTGGTCCTTTAGAAGACCAGTAAGTGCTCTT  50

seq1  AACGCCTGACTCATCTCTCCAGCCTCTGTATCTGCAACGGTTAGTGCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCCTGACTCATCTCTCCAGCCTCTGTATCTGCAACGGTTAGTGCCAG  100

seq1  TTCAAGTTGAAGCTTTCCTCTTATCAATGGATCTGTTAGATTTATGATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTTGAAGCTTTCCTCTTATCAATGGATCTGTTAGATTTATGATAG  150

seq1  TTATAAAAACAACAAAAAATGCATTTGTGACAGGTTTGATGTTTTAATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAAACAACAAAAAATGCATTTGTGACAGGTTTGATGTTTTAATGC  200

seq1  TTGATAAAATGAATGAATCATTATGTACTCTGTTAGCAATGCCGCACAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAAAATGAATGAATCATTATGTACTCTGTTAGCAATGCCGCACAGC  250

seq1  ATGCATATAGGTAAACAGTGCTGATAGTTGATAGGGCTGTAGACAGATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATATAGGTAAACAGTGCTGATAGTTGATAGGGCTGTAGACAGATGA  300

seq1  AGGACTGCCTGTAGGTGTCCTGCCAGAAGCACACATGGAGGCTTGGAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGCCTGTAGGTGTCCTGCCAGAAGCACACATGGAGGCTTGGAGGT  350

seq1  TGTGGTGAACCTACAGCTCCGACATTCCTGGTAAAAGCTAGCTCACTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGAACCTACAGCTCCGACATTCCTGGTAAAAGCTAGCTCACTGGG  400

seq1  AAACCATACAGAACAGGAGAATGCTAGGGACTGGCATAAACCCTAGCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATACAGAACAGGAGAATGCTAGGGACTGGCATAAACCCTAGCAAG  450

seq1  TAAACTCTCCGTGCTCATGCAGGAGAACTGGCAAGTTCACCAACGGCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCTCCGTGCTCATGCAGGAGAACTGGCAAGTTCACCAACGGCAGG  500

seq1  CTGGGCTGCCCCTTTCAGCCTGGAGATAACTGGTGATCCCTCCGCTTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTGCCCCTTTCAGCCTGGAGATAACTGGTGATCCCTCCGCTTTGT  550

seq1  GGTTGCTTGTTTGATTATTTTTTGCTGCTCTTGTTTTTCTAGTATCTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCTTGTTTGATTATTTTTTGCTGCTCTTGTTTTTCTAGTATCTTTG  600

seq1  ACCTTGTTACACTCCCTGCACTCTGGCAAAATTTCCCACTTATGAAACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGTTACACTCCCTGCACTCTGGCAAAATTTCCCACTTATGAAACTA  650

seq1  TCTGTGTTCTGTCTGGAGATACATTAGAGAGTCATGCCTAGCATCTCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTTCTGTCTGGAGATACATTAGAGAGTCATGCCTAGCATCTCTCT  700

seq1  CCTCAGGGATGTTCTATGCTGCCAATATTAACTTGCACCATACTACTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGGGATGTTCTATGCTGCCAATATTAACTTGCACCATACTACTGTT  750

seq1  ATTTGCATTTTCAACAATTATGTGGCTGATTTATTCATACAATAATATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCATTTTCAACAATTATGTGGCTGATTTATTCATACAATAATATTC  800

seq1  TGAAGAAATTCTAAGGACTAGGTGCTGTGCCATTATTTGATTTCCTAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAATTCTAAGGACTAGGTGCTGTGCCATTATTTGATTTCCTAAAC  850

seq1  CTTTCGGTATCATCATTGAAGGGCATTATGGAAGCTTTGCTATCTTAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCGGTATCATCATTGAAGGGCATTATGGAAGCTTTGCTATCTTAGAG  900

seq1  CCATAACCACTCAC-ACCTAATTGAAGTCCCCAAGGCACACGACTTTAT-  948
      |||||||||||||| |||||||||||||||||||||||||||||||||| 
seq2  CCATAACCACTCACAACCTAATTGAAGTCCCCAAGGCACACGACTTTATA  950

seq1  ATCTGGTTGGTGGCCTACTGTGACTCAGCAGATGGGTTTTCTTGTCAGTC  998
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGTTGTTGGCCTACTGTGACTCAGCAGATGGGTTTTCTTGTCAGTC  1000

seq1  ATTTAGAATTTTCCAAGTAGATGCCCTACTTAGATTAG-ATC-TAGTTCA  1046
      |||||||||||||||||||||||||||||||||||||| ||| |||||||
seq2  ATTTAGAATTTTCCAAGTAGATGCCCTACTTAGATTAGAATCTTAGTTCA  1050

seq1  AA-TGTCCCTGAAGTTCACC-TGGCAGAGTGTTGTGTAGAGTGGTTTATC  1094
      || ||||||||||||||||| |||||||||||||||||||||||||  ||
seq2  AATTGTCCCTGAAGTTCACCTTGGCAGAGTGTTGTGTAGAGTGGTTATTC  1100

seq1  T-CACATCTACTAGCTGGTTAACTTGCTTTACTAGTCAGGAGACTTCCTC  1143
      | ||||||||||||||| |  |||||| | |||||||||||||| |||||
seq2  TCCACATCTACTAGCTGAT--ACTTGC-TAACTAGTCAGGAGAC-TCCTC  1146

seq1  TTGGGCAATAAGCTGA  1159
      |  ||| |||||||||
seq2  T--GGC-ATAAGCTGA  1159