BAC Information

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BAC

Clone NameB6Ng01-076D20
Chromosome2 (Build37)
Map Location 89,295,976 - 89,333,245
singlet/doubletdoublet
Overlap geneOlfr1241
Upstream geneOlfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240
Downstream geneOlfr1242, Olfr1243, Olfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1, Olfr1250, Olfr1251, GA_x5J8B7TT7VM-20-924, Olfr1252, GA_x5J8B7W62NC-992588-991951, Olfr1253-ps1, Olfr1254, Olfr1255, Olfr1256, Olfr48, Olfr1257, Olfr1258, Olfr1259, Olfr1260, Olfr1261, Olfr1262, Olfr1263, Olfr1264, Olfr1265, Olfr140, Olfr1266-ps1, Olfr1267-ps1, Olfr1268-ps1, Olfr1269, Olfr32, LOC100043090, Olfr1270, LOC627525, LOC100043096, Olfr1506, Olfr142, Olfr1271, Olfr1272, Olfr1273, LOC100042690, LOC100043113, LOC668629, GA_x5J8B7W2BV0-3116-4045, Ptprj, 4933423P22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076D20.bB6Ng01-076D20.g
ACCDH892562DH892563
length1,1441,131
definitionDH892562|Mus musculus domesticus DNA, BAC clone: B6Ng01-076D20, 5' end.DH892563|Mus musculus domesticus DNA, BAC clone: B6Ng01-076D20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,295,976 - 89,296,799)(89,332,122 - 89,333,245)
sequence
gaattctttatttatctctgtaccccattttttatagggttactaggtat
tttggaatcaaacttcttcagttctttatatctattggatattagtcccc
tatcggatttgggattgatcccaatctgttggtgggatttttgtcttatt
gacagtgtcctttgcttacagaagctttgcaattttatgaggtcccattt
gtcaagtcacacaaacattgatgtcctgttcaggaattttttcccgtgtg
cccatatcttccaggctcttccccactttctcctctataagtatcagtgt
ctctggttttatgtggagttccatgatccacttagacttgaactttgtaa
aaggagataagaatggatcaatccaaattcttctacatgctaaccacaag
ttgagccagtgccatttgttgaaaatgctgtttttcaatggatggtttta
gctcccttgtcaaagatcaagtgaccataggtgagtgggtttatttctgg
gtcttcaattctattccattgatctacctgtctgtcgctgtaccagtacc
atgcagttttaaacacaattgctttttagtacagcttgctgtcaggcatg
gtgattccaccagatgttcttctattgctgagaatagtttttgttatcct
aggttttttgttattccagatgaatttgcaaattatcctttctaactctg
tgaagaagtgagttggaattttgatgggaattgcattgaatctgtagata
gcttttggcaagatatccatttttactatattaatcctgccaatccataa
gcatgggagaactcaaggaaatgttgacagaaatgttggttttttacata
actcttgtgtatgctttcaaaattcattgtgtcctgacaagaaaaattgc
atctatcctagcaattgccattttattccctttctgataaaggtataaaa
actttgattgttctcagtaaaatttgtcacagcctcagttttgtcatggt
tcctcccaaccagcctgattgaattcctcatgctattttcaggtgacttt
gtcatgtaagcacaggtgcttacacctcatcacttgtcagcatccaaatt
ggaggcaaggtgtaggtttgcaagttaattggggctttcttttt
gaattctatattctgaataccaagttaagctgaagtgagcacacgtttct
atatcttcattgccagtcaacacatttaatatttatatttttaaatagat
atctctgaagttgttttcatgtttgtgaagaattttacaaagaactatta
tgtgtaaataccatgtttagtcaaaattgcattgtacttcaacattttac
ttagatattaaaggcaaattttagaataatcaaaatttattctgtaattt
ctgtaaaaaaaaactactaaatttcttttcaatcatcatccattttggga
gatcacaacctaaaaaaagataacattattttcattgcaatacggaatat
aacgtagaattacatctattcttttatattgttttgtttgatatccttgc
ttttaaataaatattactgtatttttcaattactacactgtgatgttacg
ataacatataatccataataaagagatcattccagtgaagaaattatttt
ttcggtatctcacatgtagcttttcatattgtttgctccttacaaacctt
gtcagccaaaatctactaattcagcattacttccaataaagttaagtttt
attacctatattttcatatgcatttactagagaagacaaataatacatga
gaagaaatagtctggacctatagatgaatgttgccttacaactttaatca
tttgaaaacaactgtattaatcaaactgccctgtagtatatctagttcat
ttctaaattttgtatgggcttacctatattgtaaaaattactgaaactag
tttctatatctgtctaataccattcctagatctttcctcaaatataatca
gtttaacatcatatttatataactttaaaatatattttgatgcttttatt
atttttttgataatgaatgacattcatagcacacacatgattttctaacc
acccttatggctccagaatctacatatttaccattgtctttggttatctc
aagtacaccctggtcctcttctgagtactatttaaagggaaactggaatc
agtatttggttgtagtatttagttgtattaccacaatttgggcaactatt
atggaagaaattaaaaggcccaaagaatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_89295976_89296799
seq2: B6Ng01-076D20.b_362_1190

seq1  GAGTTCCATGATCCACTTAGACTTGAACTTTGTAAAAGGAGATAAGAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCATGATCCACTTAGACTTGAACTTTGTAAAAGGAGATAAGAATG  50

seq1  GATCAATCCAAATTCTTCTACATGCTAACCACAAGTTGAGCCAGTGCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAATCCAAATTCTTCTACATGCTAACCACAAGTTGAGCCAGTGCCAT  100

seq1  TTGTTGAAAATGCTGTTTTTCAATGGATGGTTTTAGCTCCCTTGTCAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAAAATGCTGTTTTTCAATGGATGGTTTTAGCTCCCTTGTCAAAG  150

seq1  ATCAAGTGACCATAGGTGAGTGGGTTTATTTCTGGGTCTTCAATTCTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTGACCATAGGTGAGTGGGTTTATTTCTGGGTCTTCAATTCTATT  200

seq1  CCATTGATCTACCTGTCTGTCGCTGTACCAGTACCATGCAGTTTTAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGATCTACCTGTCTGTCGCTGTACCAGTACCATGCAGTTTTAAACA  250

seq1  CAATTGCTTTTTAGTACAGCTTGCTGTCAGGCATGGTGATTCCACCAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGCTTTTTAGTACAGCTTGCTGTCAGGCATGGTGATTCCACCAGAT  300

seq1  GTTCTTCTATTGCTGAGAATAGTTTTTGTTATCCTAGGTTTTTTGTTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTCTATTGCTGAGAATAGTTTTTGTTATCCTAGGTTTTTTGTTATT  350

seq1  CCAGATGAATTTGCAAATTATCCTTTCTAACTCTGTGAAGAAGTGAGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGAATTTGCAAATTATCCTTTCTAACTCTGTGAAGAAGTGAGTTG  400

seq1  GAATTTTGATGGGAATTGCATTGAATCTGTAGATAGCTTTTGGCAAGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTGATGGGAATTGCATTGAATCTGTAGATAGCTTTTGGCAAGATA  450

seq1  TCCATTTTTACTATATTAATCCTGCCAATCCATAAGCATGGGAGAACTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTTTACTATATTAATCCTGCCAATCCATAAGCATGGGAGAACTCA  500

seq1  AGGAAATGTTGACAGAAATGTTGGTTTTTTACATAACTCTTGTGTATGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATGTTGACAGAAATGTTGGTTTTTTACATAACTCTTGTGTATGCT  550

seq1  TTCAAAATTCATTGTGTCCTGACAAGAAAAATTGCATCTATCCTAGCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAATTCATTGTGTCCTGACAAGAAAAATTGCATCTATCCTAGCAAT  600

seq1  TGCCATTTTATTCCCTTTCTGATAAAGGTATAAAAACTTTGATTGTTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTTTATTCCCTTTCTGATAAAGGTATAAAAACTTTGATTGTTCTC  650

seq1  AGTAAAA-TTGTCACAGCCTCAGTTTTGTCATGGTTCCTCCCAACCAGCC  699
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAATTTGTCACAGCCTCAGTTTTGTCATGGTTCCTCCCAACCAGCC  700

seq1  TGATTGAATTCCTCATGCTA-TGTCAGGTGACTTTGTCCAATGTAAGCAC  748
      |||||||||||||||||||| | |||||||||||||||  ||||||||||
seq2  TGATTGAATTCCTCATGCTATTTTCAGGTGACTTTGTC--ATGTAAGCAC  748

seq1  AGGTGCTTACA-CTCATCACTTGTCAGCATTCAAAATGGAGGCA--GTGT  795
      ||||||||||| |||||||||||||||||| |||| ||||||||  ||||
seq2  AGGTGCTTACACCTCATCACTTGTCAGCATCCAAATTGGAGGCAAGGTGT  798

seq1  AGTTTTGC-AGTTTATT-GGGCTTTCTTTTT  824
      || ||||| |||| ||| |||||||||||||
seq2  AGGTTTGCAAGTTAATTGGGGCTTTCTTTTT  829

seq1: chr2_89332122_89333245
seq2: B6Ng01-076D20.g_68_1198 (reverse)

seq1  AAAAATCTTTGGG-CTTTTA--TTCTTCCATATAAGT--GCCAAATTGTG  45
      |||| |||||||| ||||||  ||||||||||  |||   ||||||||||
seq2  AAAATTCTTTGGGCCTTTTAATTTCTTCCATAATAGTTGCCCAAATTGTG  50

seq1  TAAATAC-ACTAAATACTACAACCAAATACTGATTCCAGTTTTCCTTTAA  94
        ||||| |||||||||||||||||||||||||||||||||| |||||||
seq2  GTAATACAACTAAATACTACAACCAAATACTGATTCCAGTTTCCCTTTAA  100

seq1  ATAGTACTCAG-AGAGGACCAGGGTGTACTTGGAGATAACCAAAGACAAT  143
      ||||||||||| ||||||||||||||||||| ||||||||||||||||||
seq2  ATAGTACTCAGAAGAGGACCAGGGTGTACTT-GAGATAACCAAAGACAAT  149

seq1  GGTAAATATGTAGATTCTGGAGCCATAAGGGTGGTTAGAAAATCATGTGT  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATATGTAGATTCTGGAGCCATAAGGGTGGTTAGAAAATCATGTGT  199

seq1  GTGCTATGAATGTCATTCATTATC-AAAAAATAATAAAAGCATCAAAATA  242
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTGCTATGAATGTCATTCATTATCAAAAAAATAATAAAAGCATCAAAATA  249

seq1  TATTTTAAAGTTATATAAATATGATGTTAAACTGATTATATTTGAGGAAA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAAAGTTATATAAATATGATGTTAAACTGATTATATTTGAGGAAA  299

seq1  GATCTAGGAATGGTATTAGACAGATATAGAAACTAGTTTCAGTAATTTTT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTAGGAATGGTATTAGACAGATATAGAAACTAGTTTCAGTAATTTTT  349

seq1  ACAATATAGGTAAGCCCATACAAAATTTAGAAATGAACTAGATATACTAC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATAGGTAAGCCCATACAAAATTTAGAAATGAACTAGATATACTAC  399

seq1  AGGGCAGTTTGATTAATACAGTTGTTTTCAAATGATTAAAGTTGTAAGGC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAGTTTGATTAATACAGTTGTTTTCAAATGATTAAAGTTGTAAGGC  449

seq1  AACATTCATCTATAGGTCCAGACTATTTCTTCTCATGTATTATTTGTCTT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCATCTATAGGTCCAGACTATTTCTTCTCATGTATTATTTGTCTT  499

seq1  CTCTAGTAAATGCATATGAAAATATAGGTAATAAAACTTAACTTTATTGG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGTAAATGCATATGAAAATATAGGTAATAAAACTTAACTTTATTGG  549

seq1  AAGTAATGCTGAATTAGTAGATTTTGGCTGACAAGGTTTGTAAGGAGCAA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAATGCTGAATTAGTAGATTTTGGCTGACAAGGTTTGTAAGGAGCAA  599

seq1  ACAATATGAAAAGCTACATGTGAGATACCGAAAAAATAATTTCTTCACTG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATGAAAAGCTACATGTGAGATACCGAAAAAATAATTTCTTCACTG  649

seq1  GAATGATCTCTTTATTATGGATTATATGTTATCGTAACATCACAGTGTAG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATCTCTTTATTATGGATTATATGTTATCGTAACATCACAGTGTAG  699

seq1  TAATTGAAAAATACAGTAATATTTATTTAAAAGCAAGGATATCAAACAAA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGAAAAATACAGTAATATTTATTTAAAAGCAAGGATATCAAACAAA  749

seq1  ACAATATAAAAGAATAGATGTAATTCTACGTTATATTCCGTATTGCAATG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATAAAAGAATAGATGTAATTCTACGTTATATTCCGTATTGCAATG  799

seq1  AAAATAATGTTATCTTTTTTTAGGTTGTGATCTCCCAAAATGGATGATGA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATGTTATCTTTTTTTAGGTTGTGATCTCCCAAAATGGATGATGA  849

seq1  TTGAAAAGAAATTTAGTAGTTTTTTTTTACAGAAATTACAGAATAAATTT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAGAAATTTAGTAGTTTTTTTTTACAGAAATTACAGAATAAATTT  899

seq1  TGATTATTCTAAAATTTGCCTTTAATATCTAAGTAAAATGTTGAAGTACA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATTCTAAAATTTGCCTTTAATATCTAAGTAAAATGTTGAAGTACA  949

seq1  ATGCAATTTTGACTAAACATGGTATTTACACATAATAGTTCTTTGTAAAA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAATTTTGACTAAACATGGTATTTACACATAATAGTTCTTTGTAAAA  999

seq1  TTCTTCACAAACATGAAAACAACTTCAGAGATATCTATTTAAAAATATAA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCACAAACATGAAAACAACTTCAGAGATATCTATTTAAAAATATAA  1049

seq1  ATATTAAATGTGTTGACTGGCAATGAAGATATAGAAACGTGTGCTCACTT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAATGTGTTGACTGGCAATGAAGATATAGAAACGTGTGCTCACTT  1099

seq1  CAGCTTAACTTGGTATTCAGAATATAGAATTC  1124
      ||||||||||||||||||||||||||||||||
seq2  CAGCTTAACTTGGTATTCAGAATATAGAATTC  1131