BAC Information

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BAC

Clone NameB6Ng01-077P03
Chromosome17 (Build37)2 (Build37)
Map Location 53,146,474 - 53,147,426146,656,883 - 146,657,624
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC672987, EG328839, Kcnh8
Downstream geneLOC668506, EG629036, LOC668512, Efhb, LOC668513, Rab5a, 4921523A10Rik, Pcaf, EG628822, Sgol1, EG629065, 4932415M13Rik, Ck-ps1, EG637939, Sult1c2, LOC100043826, LOC100043471, EG668523, LOC629121, Gm324, Sult1c1, LOC100043829, EG435531
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077P03.bB6Ng01-077P03.g
ACCDH893785DH893786
length1,018742
definitionDH893785|Mus musculus domesticus DNA, BAC clone: B6Ng01-077P03, 5' end.DH893786|Mus musculus domesticus DNA, BAC clone: B6Ng01-077P03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(53,146,474 - 53,147,426)(146,656,883 - 146,657,624)
sequence
gaattcagaacttttcagctggggaacgagagtaccagtaagtatagctt
tacgaggtacgcctggccttgaactttctaaggaaattcaagacagtcta
tcagaagtaaagtggaaaatagctttataagatatgtttggccttgaact
ttctctagtgttagaagcccttttgttccttttcacatgttatcaagtgg
ttaaggcagggcggattctagatgaagttcaggacaatctatcagaagta
aagcggggagagagagtaggagcaaagagaaaatatggtacacaaaataa
acatacaggcctttccaagggtcttgaacccgaggaaaagtttaggtcag
gtaaaaatacctggggagagattagaaggaaggagaaggaaaaagaaaag
aaaaaagatcaattagaaaagccagttcttagtagttctgaatcagatga
aaaggctattagggcctggaaggcgctctcccgagcaggtgaagccactg
gacaataatgacagaggcaggctcttgcagcctacaaggtcttattgtcc
accctagagttgtagatcaagattataaaggggaacttcaggttctctgt
tcttgtccttaagttgtcttttctatatcacaaagagacagaatagctca
actaataattttgccaagcctacatggctgttttttcttcctctggtatt
cctagagctgcaagagggattagttctactgaaaatgattctgattactt
aataatgcctttagattgttgtcaaattttatctactcacgtaggggtaa
accctcgtggcgtcaggccattacaggtctgacaaatagatgtcacgcat
atttcctcctttgagagaaatcaatatttacatgtttagataagaagaga
tcacctccataccttaaatgattttcaaaagctgttgggagatattaatt
ggctcagaccttttttaaagattccttccgctgagttaaggcctttgttt
agtattttagaaggagat
gaattcagattggcaagctcgtgacaagtgcctttacctgctgctgagcc
atagtggaccctaagacttttatcctttatatcaccaaatgatcattaca
atggccccgaatattttgaagtgctcatgagcatgaagaggaagggttac
ttcttatttgaactccacacaagaaggtggctaccttcacaaacacaatg
gaccaatttctggttatgctcaaacctccttccaaagatatgcctgacgt
agtagactgcattggcaatacgtttcctcaccaaagagccgagcattcat
aaaggcaacctttccaaacttactaacgtgaatagtgtgcagaaagcttg
tctgaacagagtaagagaagaatctcaacttttcatgatttgtgtctttt
ctcacggagtcaaaaatgtaatgtcatctgccttcttatttactaacctc
ctttctgcccttgctgctttaaagaaaaaaaaaagtcaaacatttaggga
agataaatatagagtgtaaaagaacctaaaggggtagagtttaagcatga
aaacaagtaacatcagagctggagattaagcaattgaatatgtcggtgtt
taaaattagaatgtctccccaaagaattgataatgctccatttaagaaga
taaatgttttcaagtcatttggagtgactaaagaagtctgaataaagtag
tagtagtagtagtagtagtagtagtagtagtagtagtagtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_53146474_53147426
seq2: B6Ng01-077P03.b_44_995

seq1  AATTCAGAACTTTTCAGCTGGGGAACGGCGGTAACCCGTAAGTATAGCTT  50
      |||||||||||||||||||||||||||   || ||| |||||||||||||
seq2  AATTCAGAACTTTTCAGCTGGGGAACGAGAGT-ACCAGTAAGTATAGCTT  49

seq1  TACGAGGTACGCCTGGCCTTGAACTTTCTAAGGAAATTCAAGACAGTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGAGGTACGCCTGGCCTTGAACTTTCTAAGGAAATTCAAGACAGTCTA  99

seq1  TCAGAAGTAAAGTGGAAAATAGCTTTATAAGGTATGTTTGGCCTTGAACT  150
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCAGAAGTAAAGTGGAAAATAGCTTTATAAGATATGTTTGGCCTTGAACT  149

seq1  TTCTCTAGTGTTAGAAGCCCTTTTGTTCCTTTTCACATGTTATCAAGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAGTGTTAGAAGCCCTTTTGTTCCTTTTCACATGTTATCAAGTGG  199

seq1  TTAAGGCAGGGCGGATTCTGGATGAAGTTCAGGACAATCTATCAGAAGTA  250
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTAAGGCAGGGCGGATTCTAGATGAAGTTCAGGACAATCTATCAGAAGTA  249

seq1  AAGCGGGGAGAGAGAATAGGAGCAAAGAGAAAATATGGTACACAAAATAA  300
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAGCGGGGAGAGAGAGTAGGAGCAAAGAGAAAATATGGTACACAAAATAA  299

seq1  GCATACAGGCCTTTCCACGGGTCTTGAACCTGAGGAAAAGTTTAGGTCAG  350
       |||||||||||||||| |||||||||||| |||||||||||||||||||
seq2  ACATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAAAGTTTAGGTCAG  349

seq1  GTAAGAATACCTGGGGAGAGATTAGAAGGAAGGAAAAGGAAAAAGAAAAG  400
      |||| ||||||||||||||||||||||||||||| |||||||||||||||
seq2  GTAAAAATACCTGGGGAGAGATTAGAAGGAAGGAGAAGGAAAAAGAAAAG  399

seq1  AAAAAAGATCAATTAGAGAAGCCAGTTCTTAATAGTTCTGAATCAGATGA  450
      ||||||||||||||||| ||||||||||||| ||||||||||||||||||
seq2  AAAAAAGATCAATTAGAAAAGCCAGTTCTTAGTAGTTCTGAATCAGATGA  449

seq1  AAAGGCTATTAGGGCCTGGAAGGCGCTCTCCCGAGCAGGTGAAGCCACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTATTAGGGCCTGGAAGGCGCTCTCCCGAGCAGGTGAAGCCACTG  499

seq1  GACAATAATGACAGAGGCAGGCTCTTACAGCCTACAAGGTCTTATTGTCC  550
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GACAATAATGACAGAGGCAGGCTCTTGCAGCCTACAAGGTCTTATTGTCC  549

seq1  ACCCTAGAGTTGTAGATCAAGATTATAAAGGGGAACTTCAGGTTCTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTAGAGTTGTAGATCAAGATTATAAAGGGGAACTTCAGGTTCTCTGT  599

seq1  TCTTGTCCTCAAGTTGTCTTTTCTATATCACAAGGGGACAGAATAGCTGA  650
      ||||||||| ||||||||||||||||||||||| | |||||||||||| |
seq2  TCTTGTCCTTAAGTTGTCTTTTCTATATCACAAAGAGACAGAATAGCTCA  649

seq1  ACTAATAATTTTGCCAAGCCTACATGGCTGTTTTTTCTTCCTCTGGTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATAATTTTGCCAAGCCTACATGGCTGTTTTTTCTTCCTCTGGTATT  699

seq1  CCTAGAGCTGCCAGAGAGATTGGTTCTACTGAAAATGATTCTGATTACTT  750
      ||||||||||| |||| |||| ||||||||||||||||||||||||||||
seq2  CCTAGAGCTGCAAGAGGGATTAGTTCTACTGAAAATGATTCTGATTACTT  749

seq1  AATAATGCCTTTAGATTGTTGTCAAATTTTGTCTACTCACGTAGGGGTAA  800
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AATAATGCCTTTAGATTGTTGTCAAATTTTATCTACTCACGTAGGGGTAA  799

seq1  ACCCTCGTGGCGTCAGGCCATTACAGGTCTGACAAATGGATGTCACGCAT  850
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACCCTCGTGGCGTCAGGCCATTACAGGTCTGACAAATAGATGTCACGCAT  849

seq1  ATTTCCTCCTTTGAGAGAAATCAATATTTACATGTTTAGATAAGAAGAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTCCTTTGAGAGAAATCAATATTTACATGTTTAGATAAGAAGAGA  899

seq1  TCACCTCCATACCTTAAATGATTTTCAAAAGCTGTTGGGAGATATTAATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTCCATACCTTAAATGATTTTCAAAAGCTGTTGGGAGATATTAATT  949

seq1  GGC  953
      |||
seq2  GGC  952

seq1: chr2_146656883_146657624
seq2: B6Ng01-077P03.g_66_807

seq1  GAATTCAGATTGGCAAGCTCGTGACAAGTGCCTTTACCTGCTGCTGAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATTGGCAAGCTCGTGACAAGTGCCTTTACCTGCTGCTGAGCC  50

seq1  ATAGTGGACCCTAAGACTTTTATCCTTTATATCACCAAATGATCATTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGGACCCTAAGACTTTTATCCTTTATATCACCAAATGATCATTACA  100

seq1  ATGGCCCCGAATATTTTGAAGTGCTCATGAGCATGAAGAGGAAGGGTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCCCGAATATTTTGAAGTGCTCATGAGCATGAAGAGGAAGGGTTAC  150

seq1  TTCTTATTTGAACTCCACACAAGAAGGTGGCTACCTTCACAAACACAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATTTGAACTCCACACAAGAAGGTGGCTACCTTCACAAACACAATG  200

seq1  GACCAATTTCTGGTTATGCTCAAACCTCCTTCCAAAGATATGCCTGACGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAATTTCTGGTTATGCTCAAACCTCCTTCCAAAGATATGCCTGACGT  250

seq1  AGTAGACTGCATTGGCAATACGTTTCCTCACCAAAGAGCCGAGCATTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGACTGCATTGGCAATACGTTTCCTCACCAAAGAGCCGAGCATTCAT  300

seq1  AAAGGCAACCTTTCCAAACTTACTAACGTGAATAGTGTGCAGAAAGCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAACCTTTCCAAACTTACTAACGTGAATAGTGTGCAGAAAGCTTG  350

seq1  TCTGAACAGAGTAAGAGAAGAATCTCAACTTTTCATGATTTGTGTCTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAACAGAGTAAGAGAAGAATCTCAACTTTTCATGATTTGTGTCTTTT  400

seq1  CTCACGGAGTCAAAAATGTAATGTCATCTGCCTTCTTATTTACTAACCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACGGAGTCAAAAATGTAATGTCATCTGCCTTCTTATTTACTAACCTC  450

seq1  CTTTCTGCCCTTGCTGCTTTAAAGAAAAAAAAAAGTCAAACATTTAGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGCCCTTGCTGCTTTAAAGAAAAAAAAAAGTCAAACATTTAGGGA  500

seq1  AGATAAATATAGAGTGTAAAAGAACCTAAAGGGGTAGAGTTTAAGCATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAATATAGAGTGTAAAAGAACCTAAAGGGGTAGAGTTTAAGCATGA  550

seq1  AAACAAGTAACATCAGAGCTGGAGATTAAGCAATTGAATATGTCGGTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGTAACATCAGAGCTGGAGATTAAGCAATTGAATATGTCGGTGTT  600

seq1  TAAAATTAGAATGTCTCCCCAAAGAATTGATAATGCTCCATTTAAGAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTAGAATGTCTCCCCAAAGAATTGATAATGCTCCATTTAAGAAGA  650

seq1  TAAATGTTTTCAAGTCATTTGGAGTGACTAAAGAAGTCTGAATAAAGTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTTTTCAAGTCATTTGGAGTGACTAAAGAAGTCTGAATAAAGTAG  700

seq1  TAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAG  742
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAG  742