BAC Information

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BAC

Clone NameB6Ng01-079C13
Chromosome2 (Build37)
Map Location 140,663,810 - 140,779,519
singlet/doubletdoublet
Overlap genenone
Upstream geneTasp1, LOC672103, LOC269365, Esf1, 2310003L22Rik, Sel1l2, 2900006F19Rik, Flrt3
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079C13.bB6Ng01-079C13.g
ACCDH894653DH894654
length1,138976
definitionDH894653|Mus musculus domesticus DNA, BAC clone: B6Ng01-079C13, 5' end.DH894654|Mus musculus domesticus DNA, BAC clone: B6Ng01-079C13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(140,778,372 - 140,779,519)(140,663,810 - 140,664,781)
sequence
gaattcattgtaggtagttattactattgatgcttagattataaaccaaa
ctgattgtaaactttagcaatcacaaatagcacttatatctgcctacttt
tagtattttcaaagcactgggttcaactcaactttcattattataattat
cttaaacgtatgttttcacacataatagcttgaaaaaagaaaaagaaacc
cttaaacaatagaaggcttagaaatctaaaatgcgtcattctctattatg
tgaataatttaaaataagtgatagaaaaaataaaatatgtattttgaccc
aaatacactatccacaatgaataaacattgtaataactcacaaataaaag
atattttcttcccagcattcaaagaataactattcagagtttattcgaac
acaattgctgtcctgaggaaaaccctcatcggccggtgaagaagcagccc
caggtagaaatggaaaattaccagcagcattcgcagtataacaaatggta
acatccagggaaaactattctatttattaagggaaataaaatagaaagtt
acattggatttacttggaaaataaaataaaaatcaccagcctactctatg
tattaactttggcatttagagtgaacacagaatagacagttcgtgttagt
tgagaaggctatatctcaaaaaagagagagagagagagagagagagagag
agagagagagagagagagagagaagaaaaagtaaaagaaaaaaaagaaaa
gaaacaaaaagaaaaacaaagcaaaaacaaaagcaaaaaaccaaaaaaca
aaaaacaaaaaagaaaacctagttataatttaaatctgttagtgcctacc
tctgacattggaggttagagcacatgcctgtgctccggccacaactcagc
cttcccattagaggttgggaagcagagtgtcagaaaaacaaaaatcaagg
cactgctctcctacaaaattgctgacctcataggaatgacactcaacaaa
aaaataacctagatgaaatttcagacactcatttaaatgaagattatcag
catgtcaaacactcaagaggatatgaatatatcgcaagagaatgtgaaca
agcagatggatgaatattggagtcgatgcgaattgaaa
gaattctttcctaaatgtagatataaatgctttttgattttgataaagaa
acatgaagacttaagtgcttatcctcacgagccatatgactaagaaggat
acgtacttattttgagtctttatctcacccccttaaggaatctgagatag
aagtgttgccagtttttaaattctcctctctgaatccttgagtgccatca
aatgggaatgacttggacatgttacaagattatgatggggatgatggaat
ggtgtagtgatttggaacaagccatgtcctgtctggagagaagttataat
tggagtgtgtttatgataggcacatgatgacgaagagacatcaaatggaa
cagctccttcaccctcctctgactccccagtctgcgtcactggtttttgt
tttcaagaaggaacaaagaacatctatgtgactgtagtacctcataggtt
cccctgaaagtcctgaaatagaacctaaaaaaacctgttttctggttatg
tatttttctaaccataaattctatggagaaaccctgaaggtggagagttt
gcttctgatacccaaatatgacaagaaataccagataagtaagagaaagc
caggaaaggttgacgaacacgtggctggcagtgagcagctatgtgtgacc
aggtccagagaagtccagagatgcagagtgaggaacccgtcttttatttg
tatgaagataattcaagctacatacatgggttgctcaaaaattctttgga
tcattttggtgatgcagaacaggagaattttcagagtttaatgattagtg
gactaggttttctttgagcaggtggcatttggttatcccaggaatttgtg
ttgtgatggtgaacagagatgagactgacaggactgaagaggactgttca
aacaaatttgataaaatgagtatgcatattcttttagaaatgactaccca
tttctgaaaaaatattatggccttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_140778372_140779519
seq2: B6Ng01-079C13.b_51_1188 (reverse)

seq1  TTTCATATTCTGCATCGACTTCCATATTTCATCCATCTGCTTGTTCACAT  50
      ||||| |||| ||||||||| | ||| |||||||||||||||||||||||
seq2  TTTCA-ATTC-GCATCGACTCCAATA-TTCATCCATCTGCTTGTTCACAT  47

seq1  TCTCTTGCGATATATTCATATCCTCTTTGAGTTGTTTGAACATGCTGATA  100
      ||||||||||||||||||||||||| ||||| |||||| |||||||||||
seq2  TCTCTTGCGATATATTCATATCCTC-TTGAG-TGTTTG-ACATGCTGATA  94

seq1  ATTCTTCATTTAAATTGAGTGTCTGAAATTTCATCTAGGTTATTTTTTTG  150
      | |||||||||||| |||||||||||||||||||||||||||||||||||
seq2  A-TCTTCATTTAAA-TGAGTGTCTGAAATTTCATCTAGGTTATTTTTTTG  142

seq1  TTGAGTGTCATTCCTATGAGGTCAGCAATTTTGTAGGAGAGCAGTGCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGTCATTCCTATGAGGTCAGCAATTTTGTAGGAGAGCAGTGCCTT  192

seq1  GATTTTTTGTTTTTCTGACACTCTGCTTCCCAACCTCTAATGGGAAGGCT  250
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GA-TTTTTGTTTTTCTGACACTCTGCTTCCCAACCTCTAATGGGAAGGCT  241

seq1  GAGTTGTGGCCGGAGCACAGGCATGTGCTCTAACCTCCAATGTCAGAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGTGGCCGGAGCACAGGCATGTGCTCTAACCTCCAATGTCAGAGGT  291

seq1  AGGCACTAACAGATTTAAATTATAACTAGGTTTTCTTTTTTGTTTTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACTAACAGATTTAAATTATAACTAGGTTTTCTTTTTTGTTTTTTGT  341

seq1  TTTTTGGTTTTTTTGCTTTTGTTTTTGCTTTGTTTTTCTTTTTGTTTCTT  400
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGG-TTTTTTGCTTTTGTTTTTGCTTTGTTTTTCTTTTTGTTTCTT  390

seq1  TTCTTTTTTTTCTTTTACTTTTTCTTCTCTCTCTCTCTCTCTCTCTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTTCTTTTACTTTTTCTTCTCTCTCTCTCTCTCTCTCTCTCT  440

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTTTTTTGAGATATAGCCTTCTCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTTTTTTGAGATATAGCCTTCTCAAC  490

seq1  TAACACGAACTGTCTATTCTGTGTTCACTCTAAATGCCAAAGTTAATACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACGAACTGTCTATTCTGTGTTCACTCTAAATGCCAAAGTTAATACA  540

seq1  TAGAGTAGGCTGGTGATTTTTATTTTATTTTCCAAGTAAATCCAATGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTAGGCTGGTGATTTTTATTTTATTTTCCAAGTAAATCCAATGTAA  590

seq1  CTTTCTATTTTATTTCCCTTAATAAATAGAATAGTTTTCCCTGGATGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTATTTTATTTCCCTTAATAAATAGAATAGTTTTCCCTGGATGTTA  640

seq1  CCATTTGTTATACTGCGAATGCTGCTGGTAATTTTCCATTTCTACCTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGTTATACTGCGAATGCTGCTGGTAATTTTCCATTTCTACCTGGG  690

seq1  GCTGCTTCTTCACCGGCCGATGAGGGTTTTCCTCAGGACAGCAATTGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTCTTCACCGGCCGATGAGGGTTTTCCTCAGGACAGCAATTGTGT  740

seq1  TCGAATAAACTCTGAATAGTTATTCTTTGAATGCTGGGAAGAAAATATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAATAAACTCTGAATAGTTATTCTTTGAATGCTGGGAAGAAAATATCT  790

seq1  TTTATTTGTGAGTTATTACAATGTTTATTCATTGTGGATAGTGTATTTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTGTGAGTTATTACAATGTTTATTCATTGTGGATAGTGTATTTGG  840

seq1  GTCAAAATACATATTTTATTTTTTCTATCACTTATTTTAAATTATTCACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAATACATATTTTATTTTTTCTATCACTTATTTTAAATTATTCACA  890

seq1  TAATAGAGAATGACGCATTTTAGATTTCTAAGCCTTCTATTGTTTAAGGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGAGAATGACGCATTTTAGATTTCTAAGCCTTCTATTGTTTAAGGG  940

seq1  TTTCTTTTTCTTTTTTCAAGCTATTATGTGTGAAAACATACGTTTAAGAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTCTTTTTTCAAGCTATTATGTGTGAAAACATACGTTTAAGAT  990

seq1  AATTATAATAATGAAAGTTGAGTTGAACCCAGTGCTTTGAAAATACTAAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATAATAATGAAAGTTGAGTTGAACCCAGTGCTTTGAAAATACTAAA  1040

seq1  AGTAGGCAGATATAAGTGCTATTTGTGATTGCTAAAGTTTACAATCAGTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGCAGATATAAGTGCTATTTGTGATTGCTAAAGTTTACAATCAGTT  1090

seq1  TGGTTTATAATCTAAGCATCAATAGTAATAACTACCTACAATGAATTC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTATAATCTAAGCATCAATAGTAATAACTACCTACAATGAATTC  1138

seq1: chr2_140663810_140664781
seq2: B6Ng01-079C13.g_70_1039

seq1  GAATTCTTTCCTAAATGTAGATATAAATGCTTTTTGATTTTGATAAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCTAAATGTAGATATAAATGCTTTTTGATTTTGATAAAGAA  50

seq1  ACATGAAGACTTAAGTGCTTATCCTCACGAGCCATATGACTAAGAAGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAAGACTTAAGTGCTTATCCTCACGAGCCATATGACTAAGAAGGAT  100

seq1  ACGTACTTATTTTGAGTCTTTATCTCACCCCCTTAAGGAATCTGAGATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTACTTATTTTGAGTCTTTATCTCACCCCCTTAAGGAATCTGAGATAG  150

seq1  AAGTGTTGCCAGTTTTTAAATTCTCCTCTCTGAATCCTTGAGTGCCATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTGCCAGTTTTTAAATTCTCCTCTCTGAATCCTTGAGTGCCATCA  200

seq1  AATGGGAATGACTTGGACATGTTACAAGATTATGATGGGGATGATGGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGAATGACTTGGACATGTTACAAGATTATGATGGGGATGATGGAAT  250

seq1  GGTGTAGTGATTTGGAACAAGCCATGTCCTGTCTGGAGAGAAGTTATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAGTGATTTGGAACAAGCCATGTCCTGTCTGGAGAGAAGTTATAAT  300

seq1  TGGAGTGTGTTTATGATAGGCACATGATGACGAAGAGACATCAAATGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTGTGTTTATGATAGGCACATGATGACGAAGAGACATCAAATGGAA  350

seq1  CAGCTCCTTCACCCTCCTCTGACTCCCCAGTCTGCGTCACTGGTTTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCTTCACCCTCCTCTGACTCCCCAGTCTGCGTCACTGGTTTTTGT  400

seq1  TTTCAAGAAGGAACAAAGAACATCTATGTGACTGTAGTACCTCATAGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGAAGGAACAAAGAACATCTATGTGACTGTAGTACCTCATAGGTT  450

seq1  CCCCTGAAAGTCCTGAAATAGAACCTAAAAAAACCTGTTTTCTGGTTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGAAAGTCCTGAAATAGAACCTAAAAAAACCTGTTTTCTGGTTATG  500

seq1  TATTTTTCTAACCATAAATTCTATGGAGAAACCCTGAAGGTGGAGAGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCTAACCATAAATTCTATGGAGAAACCCTGAAGGTGGAGAGTTT  550

seq1  GCTTCTGATACCCAAATATGACAAGAAATACCAGATAAGTAAGAGAAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGATACCCAAATATGACAAGAAATACCAGATAAGTAAGAGAAAGC  600

seq1  CAGGAAAGGTTGACGAACACGTGGCTGGCAGTGAGCAGCTATGTGTGACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAGGTTGACGAACACGTGGCTGGCAGTGAGCAGCTATGTGTGACC  650

seq1  AGGTCCAGAGAAGTCCAGAGATGCAGAGTGAGGAACCCGTCTTTTATTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCAGAGAAGTCCAGAGATGCAGAGTGAGGAACCCGTCTTTTATTTG  700

seq1  TATGAAGATAATTCAAGCTACATACAT-GGTTGCTCAAAAATTCTTTGGA  749
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TATGAAGATAATTCAAGCTACATACATGGGTTGCTCAAAAATTCTTTGGA  750

seq1  TCATTTTGGTGATGCAGAACAGGAGAA-TTTCAGAGTTTAATGATTAGTG  798
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCATTTTGGTGATGCAGAACAGGAGAATTTTCAGAGTTTAATGATTAGTG  800

seq1  GACTAGGTTTTCTTTGAGCAGGTGGCATTTGGTTAT-CCAGGAA-TTGTG  846
      |||||||||||||||||||||||||||||||||||| ||||||| |||||
seq2  GACTAGGTTTTCTTTGAGCAGGTGGCATTTGGTTATCCCAGGAATTTGTG  850

seq1  TTGTGATGGTG-ACAGAGATGAGGACTGACAGGACTGAAGAGGACTGTTC  895
      ||||||||||| |||||||||| |||||||||||||||||||||||||||
seq2  TTGTGATGGTGAACAGAGATGA-GACTGACAGGACTGAAGAGGACTGTTC  899

seq1  AAAACAAATTTGATAAAATGAGTATGCATATTCTTTTTAGAAAATGACTA  945
       |||||||||||||||||||||||||||||||| |||||| |||||||||
seq2  -AAACAAATTTGATAAAATGAGTATGCATATTC-TTTTAG-AAATGACTA  946

seq1  CCCATTGTCTGAAAAAAATATTTATGG  972
      |||||| |||| |||||||| ||||||
seq2  CCCATT-TCTG-AAAAAATA-TTATGG  970