BAC Information

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BAC

Clone NameB6Ng01-079G09
Chromosome2 (Build37)
Map Location 80,331,406 - 80,331,943
singlet/doubletsinglet
Overlap genenone
Upstream geneSsfa2, Ppp1r1c, Pde1a, LOC668005, Prdx6-rs1, Dnajc10, Frzb
Downstream geneNckap1, LOC624223, Dusp19, LOC672381, Nup35, LOC103324, LOC668027, LOC100040624, LOC100040655
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079G09.bB6Ng01-079G09.g
ACCDH894818DH894819
length1,0181,214
definitionDH894818|Mus musculus domesticus DNA, BAC clone: B6Ng01-079G09, 5' end.DH894819|Mus musculus domesticus DNA, BAC clone: B6Ng01-079G09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttagattttg
tcaaatgctttctagcatctaaccagatgatcatgtggtttttgtctttg
agtttgtttatatagtggattacattgatagatttccatatattaaacca
tccctgcatccctggaatgaaacctacttggccaggatggatgattgttt
tgatgtgttcttggattcagttggggagaattttattgagtatttttgca
ttgatattcataagggaaattggtctgaatttctctatctttgttgggtc
tttctgtggtttaggtatcagagtaattgtagcttcatagaatgaattgg
gtagagtaccgtctgtttctattttgtggaataatttgagaagaactgca
attagatcttctttgaaagtctgatagaactctgcactaaacccatctgt
tcctgggcttattttgtttgggagactatttatgactgcttctatttctt
tagagcatacaggactgtttaggtcattaatctgatcctgatttaacttt
ggtacctggtatctgtctagaaatttgtctatttcatccaggttttcctt
ttgtagaaggatctgatggtgttttggatttcttcaggatctgttgttat
gcctcctttttgtttctgcttttgttaattaggatgtagtccctgtgccc
tctagtgagtctggctaagtgtttatctatctttttgattttttcaaaga
accagctcctcctttagttgattctttgaatagttattcttgtttccagt
tggttgatttcacccctttgttgattattgcctgttgtctaatcctcttg
ggtgaatttgcttcctttgttctagatcttttagtgtgttgtcaagctgc
tagtgtgtactctctagtttctttggaggcactcagagccttgaatttcc
tcttagaaatgctttcattgtgtccatagtttcggtatgttgtggcttca
tttcattgaactctaaag
gaattcaagaagatagactccagaaataccaaataaccctattaaaaatg
gggtacaaagctaaacaaagaattctcaactcaggattcttgaatggttg
acaagcacttaaagaaatgttcaacattcttagtaatcatgaaaatacaa
atcaaagcaaccctaagatcatcagtcaaaatagttaagataaaaaactc
aggcaacagtagaagctggtaaggaaatggagaaagaggaacactcctcc
attgatggtgggattgcaagctggtaaaaccactttgaaaaacaatctgg
cagtttctcagcaaaatgtaaatatttctacctgaagatccatctactgg
gaatataccaaaagacactccaacaaataacaaggacacatgctccatta
tgcttgtagcagccttatttataatagccagaatctggaaacaacccaga
tgtccctcaatagaagaaattatacaagaattgtggtatatttacacagt
ggagtactactcagccattaaaaacaatgacttcatgaaatttgcaggca
aatggatggaactagaaaatatcatcccgagtgaggcaacccagatacaa
aagcatgcacaaggtatgtactcactgataagtggattttagacccaaaa
ctcagaatactcatgatataacccaaaaaccatatgcagcttaagaagaa
gaaagcccaaagtgtagatgcttcaatcctacataaaatgggaaagaaag
tagtcacaggacctagagagatagagggaacaaagagagagagatgagga
ggagagggaaaagaggagtaggaacagatattggaaaggacagggagaag
taaggaggatcagaaattgaatagaaacatgtagtagtgggcataaccac
tagaaagtaccagacttcaggacagagaagctccagatgctactggagat
gactttagctgaatacccaacacaggaagataaacttgtagagcactgta
gtagatagacatgacccgagttgagatgtgccacccaccatctaaagtta
aacctagaaatgttctgtcaagaaaagaaaggacaaaattgacagagctg
aggatgttaacttaagcatctccacgagagatctatctatcgcgaacaag
atcccaaattgctgtcaagagctttcgcaaagagccttatgggtgttccg
tgtgcgttcacacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_80331406_80331943
seq2: B6Ng01-079G09.b_48_584 (reverse)

seq1  GATCAGGTTAATGATCTAAACAGTCCTATATCCCCTAAAGAAATAGAAGC  50
      |||||| ||||||| |||||||||||| ||| | ||||||||||||||||
seq2  GATCAGATTAATGACCTAAACAGTCCTGTATGCTCTAAAGAAATAGAAGC  50

seq1  AGCCATTAATAGTCTCCCAACCAAAAAAAGCCCAGGACCAGATGGGTTTA  100
      || ||| ||||||||||||| ||||| |||||||||| ||||||||||||
seq2  AGTCATAAATAGTCTCCCAAACAAAATAAGCCCAGGAACAGATGGGTTTA  100

seq1  GTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAATTCCAGTTCTTCAC  150
      ||||||||||||||||||| |||||||||||||||||| ||||||||| |
seq2  GTGCAGAGTTCTATCAGACTTTCAAAGAAGATCTAATTGCAGTTCTTCTC  150

seq1  AAACAATTCCACAAAATAGAAGCAGAAGGTACTCTACCCAATTCATTCTA  200
      |||  |||||||||||||||| |||| |||||||||||||||||||||||
seq2  AAATTATTCCACAAAATAGAAACAGACGGTACTCTACCCAATTCATTCTA  200

seq1  TGAAGCCACAATTACTCTGATACCTAAACCACAGAAAGACCCAACAAAGA  250
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTACAATTACTCTGATACCTAAACCACAGAAAGACCCAACAAAGA  250

seq1  TAGAGAACTTCAGACCAATTTCCCTTATGAATATCGATGATAAAATACTC  300
      ||||||| ||||||||||||||||||||||||||| |||  |||||||||
seq2  TAGAGAAATTCAGACCAATTTCCCTTATGAATATCAATGCAAAAATACTC  300

seq1  AATAAAATTCTCGCTAACCAAATCCAAGAACACATCAAAACCATCATCCA  350
      |||||||||||| | |||  ||||||||||||||||||||| ||||||||
seq2  AATAAAATTCTCCCCAACTGAATCCAAGAACACATCAAAACAATCATCCA  350

seq1  TCCTGACCAAGTAGGTTTCATTCCAGGGATGCAGGGATGGTTTAATATAT  400
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCCAAGTAGGTTTCATTCCAGGGATGCAGGGATGGTTTAATATAT  400

seq1  GGAAATTCATCAACGTAATCCACTATATAAACAAACTCAAAGACAAAAAC  450
      ||||||  ||||| ||||||||||||||||||||||||||||||||||||
seq2  GGAAATCTATCAATGTAATCCACTATATAAACAAACTCAAAGACAAAAAC  450

seq1  CACATGATCATCTCGTTAGATGCGGAGAAAGCATTTGACAAAATCTAACA  500
      ||||||||||||| |||||||||  |||||||||||||||||||||||||
seq2  CACATGATCATCTGGTTAGATGC-TAGAAAGCATTTGACAAAATCTAACA  499

seq1  CCCATTCATGATAAAAGCCTTGGAAAGATCAGGAATTC  538
      ||||||||||||||||| ||||||||||||||||||||
seq2  CCCATTCATGATAAAAGTCTTGGAAAGATCAGGAATTC  537