BAC Information

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BAC

Clone NameB6Ng01-079G11
Chromosome2 (Build37)
Map Location 121,489,976 - 121,636,588
singlet/doubletdoublet
Overlap geneFrmd5
Upstream geneStard9, Cdan1, Ttbk2, Ubr1, Tmem62, Rnu3b-ps2, Ccndbp1, Epb4.2, Tgm5, LOC640543, Lcmt2, Adal, Zscan29, D2Ertd435e, Trp53bp1, Mtap1a, Hisppd2a, Ckmt1, Strc, Catsper2, Pdia3, Ell3, Serf2, LOC574418, 2310003F16Rik, Mfap1b, Wdr76p, Mfap1a, Wdr76
Downstream geneCasc4, Mageb3, Ctdspl2, Eif3s1, 4930424G05Rik, B2m, Trim69, 4933406J08Rik, LOC433468, LOC670832, Sord, Duox2, Duoxa2, Duoxa1, Duox1, Shf, Slc28a2, Bambi-ps1, Rp23-357i14.1, Gatm, Spata5l1, AA467197, Slc30a4, Pldn, Sqrdl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079G11.bB6Ng01-079G11.g
ACCDH894822DH894823
length1,150611
definitionDH894822|Mus musculus domesticus DNA, BAC clone: B6Ng01-079G11, 5' end.DH894823|Mus musculus domesticus DNA, BAC clone: B6Ng01-079G11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,635,428 - 121,636,588)(121,489,976 - 121,490,586)
sequence
gaattcattttggatattacactgtgtgctagagactttgatgagaagga
ccggaattagtgatgttctggtaaagaaaaggcaatactatgggtgtggt
gtcatgtgcctttaatcccagcatttgggagcagaaacaaatagatctct
gtaaattcaaggcctgtttgacagacttatatagtaagttccaggacaga
cagggctatgtagagagactctgtataaaaaaaaaaaaagtcaaataaaa
gaaaaccaaaaacaggtgatactccttcctgccaaaacctaacacaattc
agtccaggttggagagactagcagggcgtgggtgtggtaggagtggggca
tctgaagtaaagtcatcaggacatttcaggcatatctgggagctggtacc
tccctgacacgattgttatttttaaatattaatttgacacaatctagagt
cactggagaagtctcagtgaggacctgtctatatctgattgtgagcatat
ctgtatggggttgtcttcattaggtgaatagaagtggaaagacctacaca
tctgtgggaggtacaaggtaaactccttgggtttgggtcttggagtgtat
aaaagagaaggtgagttgagtaccagcgtgcaagcactcattctctctgc
tcggactatgagtatgagtggctgcttcaagctcctgatgctctggctcc
ctcagtgatggactataacctagaatgaaaatgaaaataaacttttcccc
ctacattgcttttgtccggaagccagaaatgaaacggggatacctggaag
cctcttcacaatagagaaaggagctagcatcctaataacttggaaggtgg
ggggttctcaaccattgtaatttgcattttgttttaaatatagcttcctt
tatacttgaagacatgaaagcacaccactgtgattctcaaaggcacaaga
agtcttgtgtttttgttttcttgagacaagttcttagcataggctggcct
gactccactttgtagcagatggtgacctttaactttgattcttttgctct
gtgtcctgagtgctgtgatcaaagctgtcaccaaccacccccattcatgt
tgttatggataggaccgagtttatgtaagtgaacgtccctctaccactga

gaattctggaattaaaggcatgggccaccattgcctggcttgaaagagtc
ctttaacatagaaaaaaaaaaaaaaacccaaaaacccaacaacaaacact
aatggctgtgtctaccaccatgtgctaaggtaagtgagctaacatttgct
cagtgctgctggctgctactcttgctttgtacagcagcagcttgggtcta
ctgccctcagctgactgatgaaaaccagggccactgagaagctatgtgtc
ttcatttgtgtgacaaacaggggcttgcgaagttaagtgttctgggatgt
ggcttggtaataataacagagctgacacaggatgctccaggccctcagtc
tgatgtcctggcatcaccaccaaggaaggagaaagagagaaagggggaag
atcagaggaggaggaaggaggggtcactaggtgccagtgaggatagggag
gaagacagagaggaagttagataatgggtgttgaagtacagttaagttct
tgtcttttgtactctactggtgtgactacggtttataaaagcctattatg
tattttatgaaggggagagagagagagagagagagagagagagagagaga
gagagagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_121635428_121636588
seq2: B6Ng01-079G11.b_46_1195 (reverse)

seq1  TCAGTTGGTAGAGGGCCTGCTCAACTTACATAAAACTCTGAGTCCTATTC  50
      |||| |||||||||| | | || |||||||||||   ||  |||||| ||
seq2  TCAG-TGGTAGAGGGAC-GTTC-ACTTACATAAA---CTCGGTCCTA-TC  43

seq1  CATAACCACATAGAATGGGGTGTGTTGGTGTACAGCTATGATCACAGCAC  100
      |||||| |||| ||||||||   ||||||| |||||| ||||||||||||
seq2  CATAACAACAT-GAATGGGGGTGGTTGGTG-ACAGCTTTGATCACAGCAC  91

seq1  TCAGGACACAGAGGCAAAAGAATCAAAGTTAAAGGTCACCCTTCTGCTAC  150
      |||||||||||| ||||||||||||||||||||||||| || ||||||||
seq2  TCAGGACACAGA-GCAAAAGAATCAAAGTTAAAGGTCA-CCATCTGCTAC  139

seq1  AAAGTGGAGTTCAGGCCAGCCTATGCTAAGAACTTGTCTCAAGAAAACAA  200
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGAG-TCAGGCCAGCCTATGCTAAGAACTTGTCTCAAGAAAACAA  188

seq1  AAACACAAGGCTTCTTGTGCCTTTGAGAATCACAGTGGTGTGCTTTCATG  250
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAACACAAGACTTCTTGTGCCTTTGAGAATCACAGTGGTGTGCTTTCATG  238

seq1  TCTTCAAGTAT-AAGGAAGCTATATTTAAAACAAAATTGCAAATTACAAT  299
      ||||||||||| |||||||||||||||||||||||| |||||||||||||
seq2  TCTTCAAGTATAAAGGAAGCTATATTTAAAACAAAA-TGCAAATTACAAT  287

seq1  GGTTGAG-ACCCCCCACCTTCCAAGTTATTAGGATGCTAGCTCCCTTCTC  348
      ||||||| |||||||||||||||||||||||||||||||||||| |||||
seq2  GGTTGAGAACCCCCCACCTTCCAAGTTATTAGGATGCTAGCTCCTTTCTC  337

seq1  TATTGTGAAGAGGCTTCCAGGTATCCCCGTTTCATTTCTGGCTTCCGGAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGAAGAGGCTTCCAGGTATCCCCGTTTCATTTCTGGCTTCCGGAC  387

seq1  AAAAGCAATGTAGGGGGAAAAGTTTATTTTCATTTTCATTCTAGGTTATA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAATGTAGGGGGAAAAGTTTATTTTCATTTTCATTCTAGGTTATA  437

seq1  GTCCATCACTGAGGGAGCCAGAGCATCAGGAGCTTGAAGCAGCCACTCAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATCACTGAGGGAGCCAGAGCATCAGGAGCTTGAAGCAGCCACTCAT  487

seq1  ACTCATAGTCCGAGCAGAGAGAATGAGTGCTTGCACGCTGGTACTCAACT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATAGTCCGAGCAGAGAGAATGAGTGCTTGCACGCTGGTACTCAACT  537

seq1  CACCTTCTCTTTTATACACTCCAAGACCCAAACCCAAGGAGTTTACCTTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCTCTTTTATACACTCCAAGACCCAAACCCAAGGAGTTTACCTTG  587

seq1  TACCTCCCACAGATGTGTAGGTCTTTCCACTTCTATTCACCTAATGAAGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCCACAGATGTGTAGGTCTTTCCACTTCTATTCACCTAATGAAGA  637

seq1  CAACCCCATACAGATATGCTCACAATCAGATATAGACAGGTCCTCACTGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCCATACAGATATGCTCACAATCAGATATAGACAGGTCCTCACTGA  687

seq1  GACTTCTCCAGTGACTCTAGATTGTGTCAAATTAATATTTAAAAATAACA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTCCAGTGACTCTAGATTGTGTCAAATTAATATTTAAAAATAACA  737

seq1  ATCGTGTCAGGGAGGTACCAGCTCCCAGATATGCCTGAAATGTCCTGATG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTGTCAGGGAGGTACCAGCTCCCAGATATGCCTGAAATGTCCTGATG  787

seq1  ACTTTACTTCAGATGCCCCACTCCTACCACACCCACGCCCTGCTAGTCTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTACTTCAGATGCCCCACTCCTACCACACCCACGCCCTGCTAGTCTC  837

seq1  TCCAACCTGGACTGAATTGTGTTAGGTTTTGGCAGGAAGGAGTATCACCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACCTGGACTGAATTGTGTTAGGTTTTGGCAGGAAGGAGTATCACCT  887

seq1  GTTTTTGGTTTTCTTTTATTTGACTTTTTTTTTTTTTATACAGAGTCTCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGGTTTTCTTTTATTTGACTTTTTTTTTTTTTATACAGAGTCTCT  937

seq1  CTACATAGCCCTGTCTGTCCTGGAACTTACTATATAAGTCTGTCAAACAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATAGCCCTGTCTGTCCTGGAACTTACTATATAAGTCTGTCAAACAG  987

seq1  GCCTTGAATTTACAGAGATCTATTTGTTTCTGCTCCCAAATGCTGGGATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGAATTTACAGAGATCTATTTGTTTCTGCTCCCAAATGCTGGGATT  1037

seq1  AAAGGCACATGACACCACACCCATAGTATTGCCTTTTCTTTACCAGAACA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCACATGACACCACACCCATAGTATTGCCTTTTCTTTACCAGAACA  1087

seq1  TCACTAATTCCGGTCCTTCTCATCAAAGTCTCTAGCACACAGTGTAATAT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAATTCCGGTCCTTCTCATCAAAGTCTCTAGCACACAGTGTAATAT  1137

seq1  CCAAAATGAATTC  1161
      |||||||||||||
seq2  CCAAAATGAATTC  1150

seq1: chr2_121489976_121490586
seq2: B6Ng01-079G11.g_69_679

seq1  GAATTCTGGAATTAAAGGCATGGGCCACCATTGCCTGGCTTGAAAGAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGAATTAAAGGCATGGGCCACCATTGCCTGGCTTGAAAGAGTC  50

seq1  CTTTAACATAGAAAAAAAAAAAAAAACCCAAAAACCCAACAACAAACACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAACATAGAAAAAAAAAAAAAAACCCAAAAACCCAACAACAAACACT  100

seq1  AATGGCTGTGTCTACCACCATGTGCTAAGGTAAGTGAGCTAACATTTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTGTGTCTACCACCATGTGCTAAGGTAAGTGAGCTAACATTTGCT  150

seq1  CAGTGCTGCTGGCTGCTACTCTTGCTTTGTACAGCAGCAGCTTGGGTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCTGCTGGCTGCTACTCTTGCTTTGTACAGCAGCAGCTTGGGTCTA  200

seq1  CTGCCCTCAGCTGACTGATGAAAACCAGGGCCACTGAGAAGCTATGTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTCAGCTGACTGATGAAAACCAGGGCCACTGAGAAGCTATGTGTC  250

seq1  TTCATTTGTGTGACAAACAGGGGCTTGCGAAGTTAAGTGTTCTGGGATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTGTGTGACAAACAGGGGCTTGCGAAGTTAAGTGTTCTGGGATGT  300

seq1  GGCTTGGTAATAATAACAGAGCTGACACAGGATGCTCCAGGCCCTCAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGGTAATAATAACAGAGCTGACACAGGATGCTCCAGGCCCTCAGTC  350

seq1  TGATGTCCTGGCATCACCACCAAGGAAGGAGAAAGAGAGAAAGGGGGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCCTGGCATCACCACCAAGGAAGGAGAAAGAGAGAAAGGGGGAAG  400

seq1  ATCAGAGGAGGAGGAAGGAGGGGTCACTAGGTGCCAGTGAGGATAGGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGGAGGAGGAAGGAGGGGTCACTAGGTGCCAGTGAGGATAGGGAG  450

seq1  GAAGACAGAGAGGAAGTTAGATAATGGGTGTTGAAGTACAGTTAAGTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAGAGAGGAAGTTAGATAATGGGTGTTGAAGTACAGTTAAGTTCT  500

seq1  TGTCTTTTGTACTCTACTGGTGTGACTACGGTTTATAAAAGCCTATTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTTGTACTCTACTGGTGTGACTACGGTTTATAAAAGCCTATTATG  550

seq1  TATTTTATGAAGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATGAAGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  600

seq1  GAGAGAGAGAG  611
      |||||||||||
seq2  GAGAGAGAGAG  611