BAC Information

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BAC

Clone NameB6Ng01-079I14
Chromosome2 (Build37)
Map Location 41,916,527 - 42,000,968
singlet/doubletdoublet
Overlap geneLrp1b
Upstream geneLOC100042629, LOC625094
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079I14.bB6Ng01-079I14.g
ACCDH894917DH894918
length1,1591,132
definitionDH894917|Mus musculus domesticus DNA, BAC clone: B6Ng01-079I14, 5' end.DH894918|Mus musculus domesticus DNA, BAC clone: B6Ng01-079I14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(41,916,527 - 41,917,720)(41,999,812 - 42,000,968)
sequence
gaattcaggcaatctataataacttcaaaacctaagtaggtcaacaacct
gagacacagaaagtgagcatctgtgtgagatagtagtatcaaagtcagtg
taatgtttggctctcaggcttttaaatcagtttcaaaactcagtgaactt
caccgtgtggaaacacaaataactgacagagacatttcattttgctgtaa
agcatactgaactgaatagtgcttgtcaatggtttgctacttaatttggc
actaaattttaatatgttgattactcaatatgacaaacacaagaaaagac
aaatactcagtttgagtaaaaaaaaaaaaaatagaaaccgaagtctatta
ctgtaggtactaatattgcagtttccatactcacttttacttgatgattt
acacgggctatgcttatgcgagaaggtaagtgcataagcctaaggaaaat
gatgcagaagatataggagccattttttgtcagcttggataacgcccacc
aagttaccaggtctcataggaatgatataactttgtgcagcaagatgtat
gattgccttttaaagcactttcgtcatgttcagagttcaatactaagctg
acatcagatatctattttagttttaaaaagtgtgttgtcttgatatcata
actgaatcaggtttgtttcatacaggcaataatattcttatgtctggaat
catactttgaacatattaagcagaaaatagctaaccttttgattgttgtt
ttgttttttttttgacacatttcatgtgtttcccagaaaccttgaactgg
gtaaccaaaggtagcatgaattcccttcccacgtgtgaggactaaacact
tgtcaccaggtctaacaattaaaacctaaggactatggggaatgtaaaac
aattagaaatgggaagaattattttaaattactctcaaatttaataagtt
tatttgaaagtatttttatctcataaatgtagtgtttataatatactata
gcactattattatatattatagagaaattttctggtaaagcattacgtta
gcccattattgtagttacatatgcatacgaaactaaaaaaatattgatgc
attcagatagcatgagtaaccctatggcccagttatctcctaatacagaa
ctttttttt
gaattccagacacagaaatgataagagtagtcaaactttctcaggacagc
attatgggttaaggcaaggcagcaacactgagggaagttttagaaaatat
atcatccacaccacaaagagattaaagacaataataatgaaaacgaaatc
acatgctgggtaggaaaaaattttaaatattcattggctctaaatatttt
agatgtgtgcatgacctgaaattaggaattagggtgacagtagttacact
actttctttctttctttctttctttctttctttctttctttctctctctc
tctctctctctctctctctctctctttctttctttcttttagcactcttt
cttcaatatgagtacaattttctaaaatatccataaatccggcagcatcc
catttcaacaatgaggagctatagttccaggaagcaggagagtgaactga
tgaagcagaaacaagagcagatatactttccctatgggagaacaacacag
ggatcttcctcaccaccccagttcatttaaacgggtcctcctggaatggt
tactgtgagtggcctggcttgggggaaaatagcctttcaactttggcttg
ttttgtagaatttagcacatgtgtttccattctggattgatctgctatgt
tatttctggtgtatgcaagaggtcagtccaaaacaatagccctttaattt
catatgtgtgtacaacaaaaagtattataacgtaagactgcattatatca
gtggccatctatgaaaaaaaaatgaatacaatgccatcaatcacaaggaa
agaaccaagacactccataggaagacaggagtgaagcataattagaaaac
acccaggtaccagaagacgaactgtctgagtccacagcaatgggaggtgg
agacccaggaagatcagagttcaggttacccttaccagagtagtaagttg
ggccagttagtttcatagattcttttttaatatcaaatgatagaaagaga
ttaggagatgagatgtaaacgtgtcacaacataccacaccagaagtagag
agcatcccagagcttcccatgatgatgtcattataggcttgtaactcttt
tgaagactttgcaactatagctagtgactctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_41916527_41917720
seq2: B6Ng01-079I14.b_43_1201

seq1  GAATTCAGGCAATCTATAATAACTTCAAAACCTAAGTAGGTCAACAACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCAATCTATAATAACTTCAAAACCTAAGTAGGTCAACAACCT  50

seq1  GAGACACAGAAAGTGAGCATCTGTGTGAGATAGTAGTATCAAAGTCAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACACAGAAAGTGAGCATCTGTGTGAGATAGTAGTATCAAAGTCAGTG  100

seq1  TAATGTTTGGCTCTCAGGCTTTTAAATCAGTTTCAAAACTCAGTGAACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTTGGCTCTCAGGCTTTTAAATCAGTTTCAAAACTCAGTGAACTT  150

seq1  CACCGTGTGGAAACACAAATAACTGACAGAGACATTTCATTTTGCTGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGTGTGGAAACACAAATAACTGACAGAGACATTTCATTTTGCTGTAA  200

seq1  AGCATACTGAACTGAATAGTGCTTGTCAATGGTTTGCTACTTAATTTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATACTGAACTGAATAGTGCTTGTCAATGGTTTGCTACTTAATTTGGC  250

seq1  ACTAAATTTTAATATGTTGATTACTCAATATGACAAACACAAGAAAAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATTTTAATATGTTGATTACTCAATATGACAAACACAAGAAAAGAC  300

seq1  AAATACTCAGTTTGAGTAAAAAAAAAAAAAATAGAAACCGAAGTCTATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTCAGTTTGAGTAAAAAAAAAAAAAATAGAAACCGAAGTCTATTA  350

seq1  CTGTAGGTACTAATATTGCAGTTTCCATACTCACTTTTACTTGATGATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGGTACTAATATTGCAGTTTCCATACTCACTTTTACTTGATGATTT  400

seq1  ACACGGGCTATGCTTATGCGAGAAGGTAAGTGCATAAGCCTAAGGAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGGGCTATGCTTATGCGAGAAGGTAAGTGCATAAGCCTAAGGAAAAT  450

seq1  GATGCAGAAGATATAGGAGCCATTTTTTGTCAGCTTGGATAACGCCCACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAGAAGATATAGGAGCCATTTTTTGTCAGCTTGGATAACGCCCACC  500

seq1  AAGTTACCAGGTCTCATAGGAATGATATAACTTTGTGCAGCAAGATGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTACCAGGTCTCATAGGAATGATATAACTTTGTGCAGCAAGATGTAT  550

seq1  GATTGCCTTTTAAAGCACTTTCGTCATGTTCAGAGTTCAATACTAAGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCCTTTTAAAGCACTTTCGTCATGTTCAGAGTTCAATACTAAGCTG  600

seq1  ACATCAGATATCTATTTTAGTTTTAAAAAGTGTGTTGTCTTGATATCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAGATATCTATTTTAGTTTTAAAAAGTGTGTTGTCTTGATATCATA  650

seq1  ACTGAATCAGGTTTGTTTCATACAGGCAATAATATTCTTATGTCTGGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATCAGGTTTGTTTCATACAGGCAATAATATTCTTATGTCTGGAAT  700

seq1  CATACTTTGAACATATTAAGCAGAAAATAGCTAACCTTTTGATTGTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTTTGAACATATTAAGCAGAAAATAGCTAACCTTTTGATTGTTGTT  750

seq1  TTGTTTTTTTTTTGACACATTTCATGTGTTTCCCAGAAACCTTGAACTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTTTTTTGACACATTTCATGTGTTTCCCAGAAACCTTGAACTGG  800

seq1  GTAACCAAAGGTAGCATGAATTCCCTTCCCACGTGTGAGGACTAAACACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCAAAGGTAGCATGAATTCCCTTCCCACGTGTGAGGACTAAACACT  850

seq1  TGTCACCAGGTCTAACAATTAAAACCTAAGGACTATGGGGAATGTAAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACCAGGTCTAACAATTAAAACCTAAGGACTATGGGGAATGTAAAAC  900

seq1  AATTAGAAATGGGAAGAATTATTTTAAATTACTCTTCAAATTTAATAAGT  950
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AATTAGAAATGGGAAGAATTATTTTAAATTACTC-TCAAATTTAATAAGT  949

seq1  TTATTTGAAAAGTATTTTTATCTCAATAAATGTAGTGTTTTATAATATTA  1000
      ||||||| |||||||||||||||| |||||||||||| ||||||||| ||
seq2  TTATTTG-AAAGTATTTTTATCTC-ATAAATGTAGTG-TTTATAATA-TA  995

seq1  CTATAGCACTTAATTTATTATATTAATATAGAGAAATTTTCTGGTTAAAG  1050
      ||||||||||    |||||||| || |||||||||||||||||| |||||
seq2  CTATAGCACT---ATTATTATA-TATTATAGAGAAATTTTCTGG-TAAAG  1040

seq1  CATTACGGTTTAGCCCAATTATTGTAGTTACCATATGCATACAGAAACTA  1100
      |||||||  ||||||| ||||||||||||| ||||||||||| |||||||
seq2  CATTACG--TTAGCCC-ATTATTGTAGTTA-CATATGCATAC-GAAACTA  1085

seq1  AAAAAATATTGAATGCATTTTCCAGGATTAAAGCCATGAAGTTACACCCT  1150
      ||||||||||| |||||||   |||    | || |||| ||| || |   
seq2  AAAAAATATTG-ATGCATT---CAG----ATAG-CATG-AGTAACCC---  1122

seq1  TATTTGGCTCGAGTTAAATTCTCCCTATTACAGAACTTTTTTTT  1194
        | |||| | |||||   ||| |||| ||||||||||||||||
seq2  --TATGGC-CCAGTTA---TCT-CCTAATACAGAACTTTTTTTT  1159

seq1: chr2_41999812_42000968
seq2: B6Ng01-079I14.g_69_1200 (reverse)

seq1  AAGAGTACAACTAGCTAATAAGTTTGCAAAGTCTTCAAAAAGAAGTGACA  50
      ||||||   ||||||| |||   |||||||||||||||||   ||| |||
seq2  AAGAGT--CACTAGCT-ATA--GTTGCAAAGTCTTCAAAA--GAGTTACA  43

seq1  AGGCTATAATGACATCATCATGTGAAGCTCTGTGATGCTCTCTACTTTCC  100
      || ||||||||||||||||||| ||||||||| |||||||||||| ||| 
seq2  AGCCTATAATGACATCATCATGGGAAGCTCTGGGATGCTCTCTAC-TTCT  92

seq1  TGTGTGTGTATGTTGTGACACGTTTACCATCTCATCTCCCTAAATTCTCT  150
       ||||| ||||||||||||||||||| |||||||||| |||||  |||| 
seq2  GGTGTG-GTATGTTGTGACACGTTTA-CATCTCATCT-CCTAA--TCTC-  136

seq1  TTTCTATCATTTTGATATTTAAAACAGAATCTATTGAAAACCTAAACTGG  200
      ||||||||| ||||||| |||||| |||||||| |||||  || ||||||
seq2  TTTCTATCA-TTTGATA-TTAAAAAAGAATCTA-TGAAA--CT-AACTGG  180

seq1  CCCCAAACTTACTACTCTGGTAAGGGTAACCTTGAACTTCTGATCTTCCT  250
      |||  |||||||||||||||||||||||||| ||||| ||||||||||||
seq2  CCC--AACTTACTACTCTGGTAAGGGTAACC-TGAAC-TCTGATCTTCCT  226

seq1  GGGTCTCCACCTCCCATTTGCTGTGGACTCAGACAGTTCGTCTTCTGGTA  300
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GGGTCTCCACCTCCCA-TTGCTGTGGACTCAGACAGTTCGTCTTCTGGTA  275

seq1  CCTGGGTGTTTTCTAATTATGCTTCACTCCTGTCTTCCTATGGAGTGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGTGTTTTCTAATTATGCTTCACTCCTGTCTTCCTATGGAGTGTCT  325

seq1  TGGTTCTTTCCTTGTGATTGATGGCATTGTATTCATTTTTTTTTCATAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTTTCCTTGTGATTGATGGCATTGTATTCATTTTTTTTTCATAGA  375

seq1  TGGCCACTGATATAATGCAGTCTTACGTTATAATACTTTTTGTTGTACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCACTGATATAATGCAGTCTTACGTTATAATACTTTTTGTTGTACAC  425

seq1  ACATATGAAATTAAAGGGCTATTGTTTTGGACTGACCTCTTGCATACACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGAAATTAAAGGGCTATTGTTTTGGACTGACCTCTTGCATACACC  475

seq1  AGAAATAACATAGCAGATCAATCCAGAATGGAAACACATGTGCTAAATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAACATAGCAGATCAATCCAGAATGGAAACACATGTGCTAAATTC  525

seq1  TACAAAACAAGCCAAAGTTGAAAGGCTATTTTCCCCCAAGCCAGGCCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAACAAGCCAAAGTTGAAAGGCTATTTTCCCCCAAGCCAGGCCACT  575

seq1  CACAGTAACCATTCCAGGAGGACCCGTTTAAATGAACTGGGGTGGTGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTAACCATTCCAGGAGGACCCGTTTAAATGAACTGGGGTGGTGAGG  625

seq1  AAGATCCCTGTGTTGTTCTCCCATAGGGAAAGTATATCTGCTCTTGTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCCCTGTGTTGTTCTCCCATAGGGAAAGTATATCTGCTCTTGTTTC  675

seq1  TGCTTCATCAGTTCACTCTCCTGCTTCCTGGAACTATAGCTCCTCATTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCATCAGTTCACTCTCCTGCTTCCTGGAACTATAGCTCCTCATTGT  725

seq1  TGAAATGGGATGCTGCCGGATTTATGGATATTTTAGAAAATTGTACTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGGGATGCTGCCGGATTTATGGATATTTTAGAAAATTGTACTCAT  775

seq1  ATTGAAGAAAGAGTGCTAAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGAAAGAGTGCTAAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAG  825

seq1  AGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  875

seq1  AGAAAGTAGTGTAACTACTGTCACCCTAATTCCTAATTTCAGGTCATGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTAGTGTAACTACTGTCACCCTAATTCCTAATTTCAGGTCATGCA  925

seq1  CACATCTAAAATATTTAGAGCCAATGAATATTTAAAATTTTTTCCTACCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTAAAATATTTAGAGCCAATGAATATTTAAAATTTTTTCCTACCC  975

seq1  AGCATGTGATTTCGTTTTCATTATTATTGTCTTTAATCTCTTTGTGGTGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGTGATTTCGTTTTCATTATTATTGTCTTTAATCTCTTTGTGGTGT  1025

seq1  GGATGATATATTTTCTAAAACTTCCCTCAGTGTTGCTGCCTTGCCTTAAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGATATATTTTCTAAAACTTCCCTCAGTGTTGCTGCCTTGCCTTAAC  1075

seq1  CCATAATGCTGTCCTGAGAAAGTTTGACTACTCTTATCATTTCTGTGTCT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAATGCTGTCCTGAGAAAGTTTGACTACTCTTATCATTTCTGTGTCT  1125

seq1  GGAATTC  1157
      |||||||
seq2  GGAATTC  1132