BAC Information

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BAC

Clone NameB6Ng01-079I22
Chromosome2 (Build37)
Map Location 115,241,568 - 115,336,039
singlet/doubletdoublet
Overlap geneLOC100043232
Upstream geneAtpbd4, LOC100043219, LOC100043222
Downstream geneLOC100043236, BC052040, Mrg1, G630016G05Rik, 2810405F15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079I22.bB6Ng01-079I22.g
ACCDH894932DH894933
length1,196970
definitionDH894932|Mus musculus domesticus DNA, BAC clone: B6Ng01-079I22, 5' end.DH894933|Mus musculus domesticus DNA, BAC clone: B6Ng01-079I22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,334,799 - 115,336,039)(115,241,568 - 115,242,538)
sequence
gaattcctccccatctgcaaaaatacctcactttcaaagcaaactttacg
tcatcctgactccttcttctgctctttctttactactcaagtcagagaca
acgggtatttcttcagtcattgatttttttccccaccctcttgtggttaa
taagaattaatcctggagagattctgcaggttgaaatgcatatacaactc
agttctcattaaaacaaacaaacaaacaaaccaaaaaaaccacctccttt
atagtggaatagaagtggtttcaatcactttgtcatgtggttcacatatc
taggtatatttttaattaaacactggttcacaaataagcaaataatagaa
gttagtggagaagcggttgatctcgggctgacagtgcctcatttatcttt
gtcctaactagacaatgggaaacgacactccgctgttgttttctatgcgt
taagatttccctcttaaacaaatgcagttgaggcggtttgtttctcgaca
gcctggcacacactgccagtggccagagttttgtctcgtcttcatccaga
gggaggattaatcttggtgatggtgcaaacgaaatgtatgtctagggtca
aagtgcatactgccttttgggatctgcattacattaatgtcatttttggg
ttcctgacgttaatcaaaaccaacaccataaagcgtcacttagctaattt
gtgtattattgtcaatgttaccattaattatgcgtttgtgaggaaaaaga
ggattaatgagatgtcacaggtaatttacaatgatcaggctccccaggac
attaagaaaacactagttgggtaagattaccatgcgatcacatgcaagaa
gcagaggtctttgctgaggcaccacactgatattgtccaccactatcaaa
atgcctcttcaatcagcaatcctaacttttacatatctgctcatattaag
tgtttgctttagcctaaagtacccagaattcacatattaatggtgagagc
tttgtcagtgtctcccactctagtaaagagataaactttttgtttcctga
aaggtggcagtcacagacgtatctctacatgccccatgaactggtcaact
aaatcctagaaccgtttggcttgtagtgattaaattagacatacaactct
gaatgacattttgcgtctcacgtatctcagagtcattatataaatg
gaattccatcagacctttaaagatctaataccaatactcttcaaattatt
ctacaaaatagaaacagaaggaacattacccaattcattctatgaagaca
cagttacactgcatattctcccttgaagatggaatggtttttgtctaatc
aggaacttgtcacaatttcctttcatagaggacttcataagagatttttt
tctacttctatcatgttttatgttccaaatagattttaaaatctgattga
gtgcgtattacttttagcttcagaaaatatcatgtatattttagagacat
ttaactattataaattcttttgatgtctttacaaaaaggcaatactgagt
tgtatattttaaaataaattttattagtttaataaaaaaaaatagtgaga
atttacccaatatcaggcctcagttaatttgcctgaaatgtgtcattact
aagacattaccccttcatctatctaagtccaaataggatcataatcaagt
tggattgtttcactattgccttcaaacatatggaatgtagtggattgaga
aaagatctcaagaatttttaaaagaaggacaatgagagcctatatatctt
tctctacatacagtgtctacagaagccaggtgtagaagctcccacctgaa
atctcagtactcaggagacagaagcagtaggactgccataagttgaagac
cagcttaagctacatagtgttggagtgatgtttttgtgcactatgtaaag
attaacctccttttattcaaatgctgttgtctgagccagaagagatccga
ttacaggctggatcttggtattgttaagcatctcctgacctaataatatt
ttgtaaataatgttctctatcacattttgattggttaaaataaaaagcct
atggtttatagaaaagaagcagaatagcaagtcaagacttgccagagaaa
gaggaagagggggaggaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_115334799_115336039
seq2: B6Ng01-079I22.b_44_1239 (reverse)

seq1  CATTTATTTACATGACTCTGAGGAATAAGTTGAGGGAGGAAAAAAATGGT  50
      ||||||| || |||||||||||  ||| ||   | || | ||||    ||
seq2  CATTTATATA-ATGACTCTGAG--ATACGT---GAGACGCAAAA---TGT  41

seq1  CATATCAGAGAGTTTGTATGTCTAATTTTAATACAACTACCCAGAGCACC  100
      ||| ||||||   ||||||||||||||| |  || || | ||        
seq2  CAT-TCAGAG---TTGTATGTCTAATTTAATCACTACAAGCC--------  79

seq1  AAAAACGGTGTCTTAGGGATATTAAGTGTGAACCCAAGTTCATGGGGCAT  150
        ||||||| || ||||   ||| ||| |||   | ||||||||||||||
seq2  --AAACGGT-TC-TAGG---ATTTAGT-TGA---CCAGTTCATGGGGCAT  118

seq1  GGTAGAGAATTAACCGTCTGTGACTGCCCACCTTTCAAGGGAAAC-AAAA  199
       |||||||  ||  |||||||||||| ||||||||||  |||||| ||||
seq2  -GTAGAGA--TA--CGTCTGTGACTG-CCACCTTTCA--GGAAACAAAAA  160

seq1  GTTTATCCTCTGTACTTAGAGTGGGAGACACCTGAACAAAGCTCTCACCA  249
      |||||| |||| ||| |||||||||||||| ||| |||||||||||||||
seq2  GTTTAT-CTCTTTAC-TAGAGTGGGAGACA-CTG-ACAAAGCTCTCACCA  206

seq1  TTAATATGTGAATTCTGGGTACTTTAGGCTAAAGCAAACACTTAATATGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATGTGAATTCTGGGTACTTTAGGCTAAAGCAAACACTTAATATGA  256

seq1  GCAAGATATGTAAAAGTTAGGGATTGCTGATTGAAGAGGCATTTTGATAG  349
      || |||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GC-AGATATGTAAAAGTTA-GGATTGCTGATTGAAGAGGCATTTTGATAG  304

seq1  TGGTGGACAATATCAGTGTGGTGCCTCAGCAAAGACCTCTGCTTCTTGCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGACAATATCAGTGTGGTGCCTCAGCAAAGACCTCTGCTTCTTGCA  354

seq1  TGTGATCGCATGGTAATCTTACCCAACTAGTGTTTTCTTAATGTCCTGGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCGCATGGTAATCTTACCCAACTAGTGTTTTCTTAATGTCCTGGG  404

seq1  GAGCCTGATCATTGTAAATTACCTGTGACATCTCATTAATCCTCTTTTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGATCATTGTAAATTACCTGTGACATCTCATTAATCCTCTTTTTC  454

seq1  CTCACAAACGCATAATTAATGGTAACATTGACAATAATACACAAATTAGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAAACGCATAATTAATGGTAACATTGACAATAATACACAAATTAGC  504

seq1  TAAGTGACGCTTTATGGTGTTGGTTTTGATTAACGTCAGGAACCCAAAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGACGCTTTATGGTGTTGGTTTTGATTAACGTCAGGAACCCAAAAA  554

seq1  TGACATTAATGTAATGCAGATCCCAAAAGGCAGTATGCACTTTGACCCTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTAATGTAATGCAGATCCCAAAAGGCAGTATGCACTTTGACCCTA  604

seq1  GACATACATTTCGTTTGCACCATCACCAAGATTAATCCTCCCTCTGGATG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATACATTTCGTTTGCACCATCACCAAGATTAATCCTCCCTCTGGATG  654

seq1  AAGACGAGACAAAACTCTGGCCACTGGCAGTGTGTGCCAGGCTGTCGAGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACGAGACAAAACTCTGGCCACTGGCAGTGTGTGCCAGGCTGTCGAGA  704

seq1  AACAAACCGCCTCAACTGCATTTGTTTAAGAGGGAAATCTTAACGCATAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACCGCCTCAACTGCATTTGTTTAAGAGGGAAATCTTAACGCATAG  754

seq1  AAAACAACAGCGGAGTGTCGTTTCCCATTGTCTAGTTAGGACAAAGATAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAACAGCGGAGTGTCGTTTCCCATTGTCTAGTTAGGACAAAGATAA  804

seq1  ATGAGGCACTGTCAGCCCGAGATCAACCGCTTCTCCACTAACTTCTATTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGCACTGTCAGCCCGAGATCAACCGCTTCTCCACTAACTTCTATTA  854

seq1  TTTGCTTATTTGTGAACCAGTGTTTAATTAAAAATATACCTAGATATGTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTATTTGTGAACCAGTGTTTAATTAAAAATATACCTAGATATGTG  904

seq1  AACCACATGACAAAGTGATTGAAACCACTTCTATTCCACTATAAAGGAGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACATGACAAAGTGATTGAAACCACTTCTATTCCACTATAAAGGAGG  954

seq1  TGGTTTTTTTGGTTTGTTTGTTTGTTTGTTTTAATGAGAACTGAGTTGTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTTTGGTTTGTTTGTTTGTTTGTTTTAATGAGAACTGAGTTGTA  1004

seq1  TATGCATTTCAACCTGCAGAATCTCTCCAGGATTAATTCTTATTAACCAC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCATTTCAACCTGCAGAATCTCTCCAGGATTAATTCTTATTAACCAC  1054

seq1  AAGAGGGTGGGGAAAAAAATCAATGACTGAAGAAATACCCGTTGTCTCTG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGTGGGGAAAAAAATCAATGACTGAAGAAATACCCGTTGTCTCTG  1104

seq1  ACTTGAGTAGTAAAGAAAGAGCAGAAGAAGGAGTCAGGATGACGTAAAGT  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAGTAGTAAAGAAAGAGCAGAAGAAGGAGTCAGGATGACGTAAAGT  1154

seq1  TTGCTTTGAAAGTGAGGTATTTTTGCAGATGGGGAGGAATTC  1241
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTGAAAGTGAGGTATTTTTGCAGATGGGGAGGAATTC  1196

seq1: chr2_115241568_115242538
seq2: B6Ng01-079I22.g_69_1037

seq1  GAATTCCATCAGACCTTTAAAGATCTAATACCAATACTCTTCAAATTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCAGACCTTTAAAGATCTAATACCAATACTCTTCAAATTATT  50

seq1  CTACAAAATAGAAACAGAAGGAACATTACCCAATTCATTCTATGAAGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAAATAGAAACAGAAGGAACATTACCCAATTCATTCTATGAAGACA  100

seq1  CAGTTACACTGCATATTCTCCCTTGAAGATGGAATGGTTTTTGTCTAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTACACTGCATATTCTCCCTTGAAGATGGAATGGTTTTTGTCTAATC  150

seq1  AGGAACTTGTCACAATTTCCTTTCATAGAGGACTTCATAAGAGATTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTTGTCACAATTTCCTTTCATAGAGGACTTCATAAGAGATTTTTT  200

seq1  TCTACTTCTATCATGTTTTATGTTCCAAATAGATTTTAAAATCTGATTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTTCTATCATGTTTTATGTTCCAAATAGATTTTAAAATCTGATTGA  250

seq1  GTGCGTATTACTTTTAGCTTCAGAAAATATCATGTATATTTTAGAGACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGTATTACTTTTAGCTTCAGAAAATATCATGTATATTTTAGAGACAT  300

seq1  TTAACTATTATAAATTCTTTTGATGTCTTTACAAAAAGGCAATACTGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTATTATAAATTCTTTTGATGTCTTTACAAAAAGGCAATACTGAGT  350

seq1  TGTATATTTTAAAATAAATTTTATTAGTTTAATAAAAAAAAATAGTGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATTTTAAAATAAATTTTATTAGTTTAATAAAAAAAAATAGTGAGA  400

seq1  ATTTACCCAATATCAGGCCTCAGTTAATTTGCCTGAAATGTGTCATTACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACCCAATATCAGGCCTCAGTTAATTTGCCTGAAATGTGTCATTACT  450

seq1  AAGACATTACCCCTTCATCTATCTAAGTCCAAATAGGATCATAATCAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATTACCCCTTCATCTATCTAAGTCCAAATAGGATCATAATCAAGT  500

seq1  TGGATTGTTTCACTATTGCCTTCAAACATATGGAATGTAGTGGATTGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTGTTTCACTATTGCCTTCAAACATATGGAATGTAGTGGATTGAGA  550

seq1  AAAGATCTCAAGAATTTTTAAAAGAAGGACAATGAGAGCCTATATATCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCTCAAGAATTTTTAAAAGAAGGACAATGAGAGCCTATATATCTT  600

seq1  TCTCTACATACAGTGTCTACAGAAGCCAGGTGTAGAAGCTCCCACCTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTACATACAGTGTCTACAGAAGCCAGGTGTAGAAGCTCCCACCTGAA  650

seq1  ATCTCAGTACTCAGGAGACAGAAGCAGTAGGACTGCCATAAGTTGAAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGTACTCAGGAGACAGAAGCAGTAGGACTGCCATAAGTTGAAGAC  700

seq1  CAGCTTAAGCTACATAGTGTTGGAGTGATGTTTTTGTGCACTATGTAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTAAGCTACATAGTGTTGGAGTGATGTTTTTGTGCACTATGTAAAG  750

seq1  ATTAACCTCCTTTTATTCAAATGCTGTTGTCTGAGCCAGAAGAGATCCGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACCTCCTTTTATTCAAATGCTGTTGTCTGAGCCAGAAGAGATCCGA  800

seq1  TTACAGGCTGGATCTTGGTATTGTTAAGCATCTCCTGACCTAATAATATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGGCTGGATCTTGGTATTGTTAAGCATCTCCTGACCTAATAATATT  850

seq1  TTGTAAATAATGTTCTCTATCACATTTTGATTGGTTAAAATAAAAAGCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAATAATGTTCTCTATCACATTTTGATTGGTTAAAATAAAAAGCCT  900

seq1  ATGGTTTATAGAAAAAGAAGCAGAATAGCAAGTCAAGACTTGCCAAGAGA  950
      ||||||||||| |||||||||||||||||||||||||||||||| |||||
seq2  ATGGTTTATAG-AAAAGAAGCAGAATAGCAAGTCAAGACTTGCC-AGAGA  948

seq1  AAGAGGAAGAGGGGGAGGAAG  971
      |||||||||||||||||||||
seq2  AAGAGGAAGAGGGGGAGGAAG  969