BAC Information

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BAC

Clone NameB6Ng01-079L12
Chromosome2 (Build37)
Map Location 151,141,032 - 151,142,137
singlet/doubletsinglet
Overlap genenone
Upstream gene3300002I08Rik, LOC100043832, OTTMUSG00000015730, LOC668924, OTTMUSG00000015743, LOC545472, Cst7, 2310001A20Rik, Acss1, Vsx1, Entpd6, LOC100043605, Pygb, Abhd12, Gins1, LOC668925, 4930519N13Rik, LOC668926, Nanp, LOC433486, LOC381390, 4930442J19Rik
Downstream geneLOC100043839, LOC100043840, 4921509C19Rik, Nsfl1c, Fkbp1a, Sdcbp2, Snph, LOC668929, BC052486, 5430405G05Rik, Psmf1, Rspo4, Angpt4, 5430432M24Rik, 2310046K01Rik, Scrt2, Srxn1, Tcf15, LOC100043843, Csnk2a1, Tbc1d20, Rbck1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079L12.bB6Ng01-079L12.g
ACCDH895047DH895048
length1,2311,092
definitionDH895047|Mus musculus domesticus DNA, BAC clone: B6Ng01-079L12, 5' end.DH895048|Mus musculus domesticus DNA, BAC clone: B6Ng01-079L12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttaatggggttgtttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttgggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgctttgcagaagcattgcaatttta
tgagatcccatttatcgattcttgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtacccatatcttcgaggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgaggagtttcttaa
tccacttagatttgaccttagtacaaggagatagaaatggatcaatttgc
attcttctacatgataaccgccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggtttaagttcccttgtcaaagatcaagt
caacataggtgtgtgggttcatctcagggtcttcaattctcttccattgg
tctacttgtctgtcactataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggttatacatggtgattccaccagaggtacttt
tatccttgagaagagtttttgctatcctaggttttttgttgttccagatg
aatttgcacattgctctttctacttcgttgaggaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
tacatgtgatcctgccaatccatgagcatgggagatctttccatcttctg
agatcttctgtatttctttcttcagggacttgaagttttatcatacagat
ctttcacttccttagttagagtcacgcctaggtattatatatttgtgact
attgagaatggtgtgtttccctaatttcttctagctgttaatcttttgtt
acagaaaggcattgactgttgaatatttaatatccagctacttcatgaag
ctgttatcagcttaggtgttccctggggattttaggtcacctattatact
atcaatcatctggcaaaggaaattggactcctcctttccaattgaacctt
gaacccttgttgtcaattgcatgctaggactcagcatcagagtgaatgga
tatggggcaagtgagaggcatgtccttgact
gaattcaactgtcaaacactccagacttctccttgactccactcagagga
caggtggtgcacctcacctttcatgtggtcagatgtcctatgacaaaatg
ttcaccatggcatggcaaatggctccgatgaagcagtagaagaggtggtt
agtgttttcaaatgagcgtggatacaagagaaaactaatttgaaggacac
ctaaagtcacatgaaatatgcaagtactttgtttagcatggaggttctct
ggaaaattcactagcatgaactgtacataagtacatctcaaagtgtgtgt
gtacctgtgtgtccctccaaaatagttttgatattgagaagtgtgcatcc
atatgaggttgcaaagcaacaagcaaactcaataatagttacagtgctgg
ggtgagttgtgaaggtgtctgaatcttggtgggttaggagcaagctgtcc
agcaagtcaggatggttttgagagctgcaccaaaagcaatggactcacct
gttcctgtccactctcttcccttatgagcactctctttgctctgtttctg
actctcgctggtcagctgtcgtcatcttggacacaatcacaaggagttca
ggaactctggggtcttaatctgcttccagtatctactgtctcttctaatg
gctcatgggtacatttggagacagacagctggccatcttaccatgcctgg
aagttcctctaaggcccgtcttcctgatggtgacctgcatgcagtggtac
cttcattccaggatttctgagttacatgggagctcctcacttggctggaa
catttggtgacactaccaaccatcatgaaacaacctagagcacaaagagg
ggagtcatgagatcagacctgtctcctagactcttgctgggtcttcatgc
cccagaggaccagaaggctattacaccccaataaaaacactgctcttgtg
caaataggggaatagtttgcctttacttacacctgtgatgagatatgctt
ccacatgggccaagcctggtaaacctacctgattctcgctgagctgtctt
catcctcacagctgtatctacctcctgattcatcatccagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_151141032_151142137
seq2: B6Ng01-079L12.g_69_1160

seq1  GAATTCAACTGTCAAACACTCCAGACTTCTCCTTGACTCCACTCAGAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTGTCAAACACTCCAGACTTCTCCTTGACTCCACTCAGAGGA  50

seq1  CAGGTGGTGCACCTCACCTTTCATGTGGTCAGATGTCCTATGACAAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGTGCACCTCACCTTTCATGTGGTCAGATGTCCTATGACAAAATG  100

seq1  TTCACCATGGCATGGCAAATGGCTCCGATGAAGCAGTAGAAGAGGTGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCATGGCATGGCAAATGGCTCCGATGAAGCAGTAGAAGAGGTGGTT  150

seq1  AGTGTTTTCAAATGAGCGTGGATACAAGAGAAAACTAATTTGAAGGACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTTCAAATGAGCGTGGATACAAGAGAAAACTAATTTGAAGGACAC  200

seq1  CTAAAGTCACATGAAATATGCAAGTACTTTGTTTAGCATGGAGGTTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGTCACATGAAATATGCAAGTACTTTGTTTAGCATGGAGGTTCTCT  250

seq1  GGAAAATTCACTAGCATGAACTGTACATAAGTACATCTCAAAGTGTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATTCACTAGCATGAACTGTACATAAGTACATCTCAAAGTGTGTGT  300

seq1  GTACCTGTGTGTCCCTCCAAAATAGTTTTGATATTGAGAAGTGTGCATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTGTGTGTCCCTCCAAAATAGTTTTGATATTGAGAAGTGTGCATCC  350

seq1  ATATGAGGTTGCAAAGCAACAAGCAAACTCAATAATAGTTACAGTGCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGGTTGCAAAGCAACAAGCAAACTCAATAATAGTTACAGTGCTGG  400

seq1  GGTGAGTTGTGAAGGTGTCTGAATCTTGGTGGGTTAGGAGCAAGCTGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGTTGTGAAGGTGTCTGAATCTTGGTGGGTTAGGAGCAAGCTGTCC  450

seq1  AGCAAGTCAGGATGGTTTTGAGAGCTGCACCAAAAGCAATGGACTCACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTCAGGATGGTTTTGAGAGCTGCACCAAAAGCAATGGACTCACCT  500

seq1  GTTCCTGTCCACTCTCTTCCCTTATGAGCACTCTCTTTGCTCTGTTTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTGTCCACTCTCTTCCCTTATGAGCACTCTCTTTGCTCTGTTTCTG  550

seq1  ACTCTCGCTGGTCAGCTGTCGTCATCTTGGACACAATCACAAGGAGTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCGCTGGTCAGCTGTCGTCATCTTGGACACAATCACAAGGAGTTCA  600

seq1  GGAACTCTGGGGTCTTAATCTGCTTCCAGTATCTACTGTCTCTTCTAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTCTGGGGTCTTAATCTGCTTCCAGTATCTACTGTCTCTTCTAATG  650

seq1  GCTCATGGGTACATTTGGAGACAGACAGCTGGCCATCTTACCATGCCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATGGGTACATTTGGAGACAGACAGCTGGCCATCTTACCATGCCTGG  700

seq1  AAGTTCCTCTAAGGCCCGTCTTCCTGATGGTGACCTGCATGCAGTGGTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCCTCTAAGGCCCGTCTTCCTGATGGTGACCTGCATGCAGTGGTAC  750

seq1  CTTCATTCCAGGATTTCTGAGTTACAT-GGAGCTCCTCACTTGGCTGGAA  799
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTTCATTCCAGGATTTCTGAGTTACATGGGAGCTCCTCACTTGGCTGGAA  800

seq1  CATTT-GTGACACTACCAACCATCATGAAACAACCTAGAGCACAAAGAGG  848
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGTGACACTACCAACCATCATGAAACAACCTAGAGCACAAAGAGG  850

seq1  GGAGTCATGAGATCAGACCTGTCTCCTAGACTCCTTGCTGGGTCCTCATG  898
      |||||||||||||||||||||||||||||||| ||||||||||| |||||
seq2  GGAGTCATGAGATCAGACCTGTCTCCTAGACT-CTTGCTGGGTCTTCATG  899

seq1  CCCCAGAGGACCCAAGAAGGCTATTACACCCCAATAAACACACTGCTCCT  948
      ||||||||||||  |||||||||||||||||||||||| ||||||||| |
seq2  CCCCAGAGGACC--AGAAGGCTATTACACCCCAATAAAAACACTGCTCTT  947

seq1  GTGCAGATAGGGGAATAGTTTGCCTTTACTTACAACCTGTGATGTAGATA  998
      ||||| ||||||||||||||||||||||||||| |||||||||| |||||
seq2  GTGCAAATAGGGGAATAGTTTGCCTTTACTTAC-ACCTGTGATG-AGATA  995

seq1  TGGCTTCCCACAGGGGCCAAGCCCTGTGAGAACCCTACCTGATTCTCGCC  1048
      | |||| ||||| ||||||||||   ||  || ||||||||||||||| |
seq2  T-GCTT-CCACATGGGCCAAGCC---TGGTAAACCTACCTGATTCTCG-C  1039

seq1  TGAGCCTGTCTTCATCCTCAACAAGCTGCTATCTACTCTCTGATTCCATC  1098
      |||| |||||||||||||||   ||||| |||||||   |||||| ||||
seq2  TGAG-CTGTCTTCATCCTCA--CAGCTG-TATCTACCTCCTGATT-CATC  1084

seq1  ATCCAGGA  1106
      ||||||||
seq2  ATCCAGGA  1092