BAC Information

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BAC

Clone NameB6Ng01-079L15
Chromosome2 (Build37)
Map Location 110,952,105 - 110,953,298
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668797, Bbox1, 1110018M03Rik, LOC668799, Slc5a12, Muc15, LOC668802
Downstream geneLOC623270, LOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079L15.bB6Ng01-079L15.g
ACCDH895053DH895054
length1,1621,217
definitionDH895053|Mus musculus domesticus DNA, BAC clone: B6Ng01-079L15, 5' end.DH895054|Mus musculus domesticus DNA, BAC clone: B6Ng01-079L15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatatgaaaatataatcactttttgaataagtacagaactattt
tttatttaaattttaattaaaatatattaatataattttactcttttctt
tcttccagcactgtccatatacagtttcatttttccctcttaaaaacatg
gcttcctttttgttattgttataaaataattgaataaaatgacaaaataa
taaaatttttgtgcgtttgttttaaataatggaatggaaattctagatgt
attatagaagtttttccaattttttttaaattgcaaaaattaatgaaaag
gaattgagagcatattttagtaggtatttgaattaactctctgtattata
gtacacctccttccacttacaggaataaacattcatgaagtctgattatc
tgattcccagtctcctttccaatcttattttctaacaacttaaattataa
tcagaggtggcttgctcttctctttacccatgctgctgctcaattatttc
caaggtaggcacagtgacacttctgaaagtttttccatgaatttaaaacc
atcatcttactcagattcccactatgaaagaggacttctccagggccaca
aatcagtcttatttgtgtgagaacttaatctgattttaagttatttcact
attttattcaagtggatcactgtaatctcactagttgtcacatctaaaat
acttctaagatactcagaaatagcagaagacaatggaagaaaaccattct
agatgtaacttctgtctctgctttgatgaaaaaaaatggtgagaaactat
tgataaggggaatgaaaatgggcttagggggaactccagcacaatttatt
ctctgtccatatgaaaacctatcagtttttggcaaatacaaatagtgtat
ctatattagaacagataaacatatattaatgtcaactaactttttgcagt
gtaatttggttatttgatgaatttcccagccaatattagataaatatgaa
atgatgtttgacatatcagtgggaatcaatgaatagtgtcatatttcatg
ctaagtaataacaaacatactatctcctgatttataacagaagaatatag
gaagaaaattttggaaataataatcaaaaataatcgtgtcatagatcaag
aaattttaaatt
gaattcctatccctgtcagggccttctatttttcccacaacagttccata
agagttcctgacctctgtccaaagtttgcctacgggtatctgccactgtc
agatgctgggcagagcctctcagagaatagtcatgttaggttctttgctg
caagcataacagtatcattaatagtgtcagggattggtgcttgcctatgg
gatgggtttcaagttgagccagttattggttggctattccttccatctct
gctccttctttgtccttctgaattttttgtagacaggacaaattttaggc
tgaaagttttgtgggtgggttggtgtccttatttctccactggggtccta
cctggctacaggaggtagcctcttcatattccatttctctactgctataa
gtctcaggtaaaatcacccccatgaactcttgggtgccccagaccaggtc
tctggcacatcctagatatgtcctctactcccacccatgccagccacaga
tacccattcactttcctggctctctggtcatctctgctgtcccttcacac
atctaattcagatcaccccagtcccctccctattccctctcccacccagt
tctgtccctccttctgccccttgtgactattttattcccccttttaaatg
agatgcatgtcattttgggtctgggttacttcactcaagataatattctc
cagttccattcatttacctgtacaattcatgatgtgcttgtttattcata
gctgaatggtgtaaatgaaccacgaaatgctacttttaaaggattaaaca
gtttccttctaggactatatttgagaccagttatcttttacttttgtttt
gaagttgtgtttattgatttttagtgagatattttatatgcactttaaga
catatgtgcctttaaatgaaactctgcttgcacaagtgatatataaacct
attggaagcaaagtgaggaagaaacagaaataatattctatgatatagtg
ctctacaggggaaatccaaagttgctttatcacaaggaagaattttaaaa
gtatgaatacaagaagcgtaaatagttctgaaaggagaggattgctgact
ccggaaacaaacaaattaaatgaaacaaccccactctagtgtaatatgaa
tatactggaaaagttggtgacctcagtgttttgccaaaaactacctcatt
ggctcagccgttagtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_110952105_110953298
seq2: B6Ng01-079L15.b_50_1211

seq1  GAATTCAATATGAAAATATAATCACTTTTTGAATAAGTACAGAACTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATGAAAATATAATCACTTTTTGAATAAGTACAGAACTATTT  50

seq1  TTTATTTAAATTTTAATTAAAATATATTAATATAATTTTACTCTTTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTAAATTTTAATTAAAATATATTAATATAATTTTACTCTTTTCTT  100

seq1  TCTTCCAGCACTGTCCATATACAGTTTCATTTTTCCCTCTTAAAAACATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCAGCACTGTCCATATACAGTTTCATTTTTCCCTCTTAAAAACATG  150

seq1  GCTTCCTTTTTGTTATTGTTATAAAATAATTGAATAAAATGACAAAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTTTTTGTTATTGTTATAAAATAATTGAATAAAATGACAAAATAA  200

seq1  TAAAATTTTTGTGCGTTTGTTTTAAATAATGGAATGGAAATTCTAGATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTTTTGTGCGTTTGTTTTAAATAATGGAATGGAAATTCTAGATGT  250

seq1  ATTATAGAAGTTTTTCCAATTTTTTTTAAATTGCAAAAATTAATGAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGAAGTTTTTCCAATTTTTTTTAAATTGCAAAAATTAATGAAAAG  300

seq1  GAATTGAGAGCATATTTTAGTAGGTATTTGAATTAACTCTCTGTATTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGAGAGCATATTTTAGTAGGTATTTGAATTAACTCTCTGTATTATA  350

seq1  GTACACCTCCTTCCACTTACAGGAATAAACATTCATGAAGTCTGATTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACCTCCTTCCACTTACAGGAATAAACATTCATGAAGTCTGATTATC  400

seq1  TGATTCCCAGTCTCCTTTCCAATCTTATTTTCTAACAACTTAAATTATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCCCAGTCTCCTTTCCAATCTTATTTTCTAACAACTTAAATTATAA  450

seq1  TCAGAGGTGGCTTGCTCTTCTCTTTACCCATGCTGCTGCTCAATTATTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGTGGCTTGCTCTTCTCTTTACCCATGCTGCTGCTCAATTATTTC  500

seq1  CAAGGTAGGCACAGTGACACTTCTGAAAGTTTTTCCATGAATTTAAAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTAGGCACAGTGACACTTCTGAAAGTTTTTCCATGAATTTAAAACC  550

seq1  ATCATCTTACTCAGATTCCCACTATGAAAGAGGACTTCTCCAGGGCCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTTACTCAGATTCCCACTATGAAAGAGGACTTCTCCAGGGCCACA  600

seq1  AATCAGTCTTATTTGTGTGAGAACTTAATCTGATTTTAAGTTATTTCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTCTTATTTGTGTGAGAACTTAATCTGATTTTAAGTTATTTCACT  650

seq1  ATTTTATTCAAGTGGATCACTGTAATCTCACTAGTTGTCACATCTAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTCAAGTGGATCACTGTAATCTCACTAGTTGTCACATCTAAAAT  700

seq1  ACTTCTAAGATACTCAGAAATAGCAGAAGACAATGGAAGAAAACCATTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTAAGATACTCAGAAATAGCAGAAGACAATGGAAGAAAACCATTCT  750

seq1  AGATGTAACTTCTGTCTCTGCTTTGATGAAAAAAAATGGTGAGAAACTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTAACTTCTGTCTCTGCTTTGATGAAAAAAAATGGTGAGAAACTAT  800

seq1  TGATAAGGGGAATGAAAATGGGCTTAGGGGGAACTCCAGCACAATTTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAGGGGAATGAAAATGGGCTTAGGGGGAACTCCAGCACAATTTATT  850

seq1  CTCTGTCCATATGAAAACCTATCAGTTTTTGGCAAATACAAATAGTGTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCCATATGAAAACCTATCAGTTTTTGGCAAATACAAATAGTGTAT  900

seq1  CTATATTAGAACAAGATAAAACATATATTAATGTCAACTAACTTTTTGCA  950
      |||||||||||| |||| ||||||||||||||||||||||||||||||||
seq2  CTATATTAGAAC-AGAT-AAACATATATTAATGTCAACTAACTTTTTGCA  948

seq1  GTGTAATTTGGTTATTTGATGAATTTCCCCAAGCCAAATATTAGAATAAA  1000
      |||||||||||||||||||||||||||||  |||| |||||||| |||||
seq2  GTGTAATTTGGTTATTTGATGAATTTCCC--AGCC-AATATTAG-ATAAA  994

seq1  TTATGAAATGATTGTTTGGACCATATCAGTGGGGAATCAATGAATAGTGT  1050
       |||||||||| ||||||   ||||||||| |||||||||||||||||| 
seq2  -TATGAAATGA-TGTTTG--ACATATCAGT-GGGAATCAATGAATAGTG-  1038

seq1  TCATATTTTCAATGGCTAAGTAATAACAAACATACTATTCTCTTTGATTT  1100
      ||||| |||||   ||||||||||||||||||||||| ||||  ||| ||
seq2  TCATA-TTTCA--TGCTAAGTAATAACAAACATACTA-TCTC-CTGA-TT  1082

seq1  TATAACAGAAGAATATAGGGAGAAAATATTGGTATAATAATAATCAAAAA  1150
      ||||||||||||||||||| ||||||| ||||   |||||||||||||||
seq2  TATAACAGAAGAATATAGGAAGAAAATTTTGG--AAATAATAATCAAAAA  1130

seq1  ATTTAATTATGTGTTAATATAGATTCAAGGAAAAATTTTAAATT  1194
         ||||  |||      ||||| |||||   ||||||||||||
seq2  ---TAATCGTGT-----CATAGA-TCAAG---AAATTTTAAATT  1162