BAC Information

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BAC

Clone NameB6Ng01-080F14
Chromosome2 (Build37)13 (Build37)
Map Location 142,776,684 - 142,777,24478,306,091 - 78,306,605
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080F14.bB6Ng01-080F14.g
ACCDH895513DH895514
length981509
definitionDH895513|Mus musculus domesticus DNA, BAC clone: B6Ng01-080F14, 5' end.DH895514|Mus musculus domesticus DNA, BAC clone: B6Ng01-080F14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,684 - 142,777,244)(78,306,091 - 78,306,605)
sequence
gaattctttcttcagttctgagccccatttttaatggggttatttgattt
tctgaagtctaccttcttgagttctttatatatgttggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgacggtgtcttttgccttgcagaaactttggagtttcat
taggtcccatttgtcaattctctttcttacagcacaagccattgctgttc
tattcaggaattattcccctgtgcccatatcttcaaggctttttcccact
ttctcctctataattttcagtgtctctggtttttttgtggcgttccttga
tcctcttagttttgttcttagtacaaggagataggaatgagtcaattcac
attcttctacatgataaccaccagttgtggcagcaccatttgttgaaaat
gctgtcttttttttccactggatggttttagctctcctgtcaaagatcaa
gtgaccataggtgtgcgggttcatttctgggtcttcaattctattccatt
ggtctacttgtctgtcagtataccagtaccatgcagtttttatcacaatt
gctctatagtaaagctttaggtcaggcatggtgtggttcataacttctgt
tagtttcactgtgtctctgctagtttctgtttccatgatctgtccattga
tgagagtgatgtgttgaagtctcccactattattgtgtgaggtgtaatgt
gtgctttgagttttagcaaagtatctttactgaatgtggatgcccttgca
tttgaagcacagatgttcagaattgagtgttcatcttggtaaattttacc
tttggtaagtaagaagtgtccttctttatcttttttgagaactttaggtt
gaaagtcgcttctattcgatattagaatggctattctaacttgtttcttg
ggacattggcttggaaaatgtttccagcctt
atttaagaaagcctgctattaagtaattttcacagtgtaaattttcacag
taattttttgaaaacttttctcatgtggggagaggtttaaaaaacatgag
atatttatatttttgaaatatgggtggcaaaaagggagataattgtggtg
actacttaaatgctctctagcataatattataaaatagaaaactctaaga
catatgagacatactcctttcaaaaactgcaatactttccttccctgtat
aaaatgactgaggaggaatctcttaaattgttcaccttccttttatctaa
tgttctattagtctccaaaaaggaaaaaaaaataataataagtttgggcc
tgggagaggggtttttaatcaacacttcacagagcttaaaactatcccgc
ctaaagcgttagctttgtgagatgattttaaattcaaaccactgcaactg
ccatcactgtactcgaagaatggacaccaactggaattttggggcggggg
gggggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776684_142777244
seq2: B6Ng01-080F14.b_50_602 (reverse)

seq1  GTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTA  50
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCGCACACCTA  50

seq1  TGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGG--AAGAA  98
      ||||||||||||||| |||| | ||||||||||||||||| ||  || ||
seq2  TGGTCACTTGATCTTTGACAGGAGAGCTAAAACCATCCAGTGGAAAAAAA  100

seq1  AGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTA  148
      |||||||||||||||||| |||||||| |||||||||| |||||||||||
seq2  AGACAGCATTTTCAACAAATGGTGCTGCCACAACTGGTGGTTATCATGTA  150

seq1  GAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCT  198
      |||||||| |||| ||  ||| | |||||||||||||||||  |||| ||
seq2  GAAGAATGTGAATTGACTCATTCCTATCTCCTTGTACTAAGAACAAAACT  200

seq1  AAGTGGATCAAGGAACTTCAC-ATAAAACCAGAGACACTGAAACTTATAG  247
      ||| ||||||||||||  ||| | ||||||||||||||||||| ||||||
seq2  AAGAGGATCAAGGAACGCCACAAAAAAACCAGAGACACTGAAAATTATAG  250

seq1  AGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATTC  297
      ||||||||||||| |||||||||||||||||||||||||||||  |||||
seq2  AGGAGAAAGTGGGAAAAAGCCTTGAAGATATGGGCACAGGGGAATAATTC  300

seq1  CTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATG  347
      ||||| |||||||||||||||||||||||||||  |||||||||||||||
seq2  CTGAATAGAACAGCAATGGCTTGTGCTGTAAGAAAGAGAATTGACAAATG  350

seq1  GGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATA  400

seq1  AGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAA  450

seq1  TCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTAGA  500

seq1  CTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCACAAAACCATC  547
      ||||||||||||||||||||||||| |||||||||||||| ||       
seq2  CTTCAGAAAATCAAATAACCCCATT-AAAAATGGGGCTCAGAA-------  542

seq1  CAGTGGAAGAAAGA  561
           |||||||||
seq2  ---CTGAAGAAAGA  553

seq1: chr13_78306091_78306605
seq2: B6Ng01-080F14.g_69_583

seq1  GAATTCATTTAAGAAAGCCTGCTATTAAGTAATTTTCACAGTGTAAATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTAAGAAAGCCTGCTATTAAGTAATTTTCACAGTGTAAATTT  50

seq1  TCACAGTAATTTTTTGAAAACTTTTCTCATGTGGGGAGAGGTTTAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTAATTTTTTGAAAACTTTTCTCATGTGGGGAGAGGTTTAAAAAA  100

seq1  CATGAGATATTTATATTTTTGAAATATGGGTGGCAAAAAGGGAGATAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGATATTTATATTTTTGAAATATGGGTGGCAAAAAGGGAGATAATT  150

seq1  GTGGTGACTACTTAAATGCTCTCTAGCATAATATTATAAAATAGAAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGACTACTTAAATGCTCTCTAGCATAATATTATAAAATAGAAAACT  200

seq1  CTAAGACATATGAGACATACTCCTTTCAAAAACTGCAATACTTTCCTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGACATATGAGACATACTCCTTTCAAAAACTGCAATACTTTCCTTCC  250

seq1  CTGTATAAAATGACTGAGGAGGAATCTCTTAAATTGTTCACCTTCCTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATAAAATGACTGAGGAGGAATCTCTTAAATTGTTCACCTTCCTTTT  300

seq1  ATCTAATGTTCTATTAGTCTCCAAAAAGGAAAAAAAAATAATAATAAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATGTTCTATTAGTCTCCAAAAAGGAAAAAAAAATAATAATAAGTT  350

seq1  TGGGCCTGGGAGAGGGGTTTTTAATCAACACTTCACAGAGCTTAAAACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCTGGGAGAGGGGTTTTTAATCAACACTTCACAGAGCTTAAAACTA  400

seq1  TCCCGCCTAAAGCGTTAGCTTTGTGAGATGATTTTAAATTCAAACCACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGCCTAAAGCGTTAGCTTTGTGAGATGATTTTAAATTCAAACCACTG  450

seq1  CAACTGCCATCACTGTACTCGAAGAATGGACACCAACTGGAATTTTGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGCCATCACTGTACTCGAAGAATGGACACCAACTGGAATTTTGGGG  500

seq1  CGGGGGGGGGGGGAG  515
      |||||||||||||||
seq2  CGGGGGGGGGGGGAG  515