MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-080H07
Chromosome	2 (Build37)
Map Location	149,963,992 - 149,965,205
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC433483, LOC383754, LOC100043593, LOC241715, Cst10, EG667048, C530025M09Rik, OTTMUSG00000015750, LOC279056, Zfp120
Downstream gene	EG245174, 3300002I08Rik, LOC100043832, OTTMUSG00000015730, LOC668924, OTTMUSG00000015743, LOC545472, Cst7, 2310001A20Rik, Acss1, Vsx1, Entpd6, LOC100043605, Pygb, Abhd12, Gins1, LOC668925, 4930519N13Rik, LOC668926, Nanp, LOC433486, LOC381390
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC433483 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433483
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 1 Protein

name	LOC383754 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383754
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	LOC100043593 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043593
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC241715 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:241715
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins pseudo : _no_value

name	Cst10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58214 MGI:1930004
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667048 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667048 MGI:3643057
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 322 ESTs, 25 Proteins pseudo : _no_value

name	C530025M09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319470 MGI:2442090
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs

name	OTTMUSG00000015750 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433485 MGI:3702158
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 56 ESTs, 3 Proteins

name	LOC279056 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:279056
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins pseudo : _no_value

name	Zfp120 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104348 MGI:1345179
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG245174 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245174 MGI:3644476
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 2 Proteins

name	3300002I08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69277 MGI:1916527
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043832 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043832
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 30 ESTs, 34 Proteins pseudo : _no_value

name	OTTMUSG00000015730 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668923 MGI:3651999
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 1 Protein

name	LOC668924 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668924
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 33 ESTs, 3 Proteins pseudo : _no_value

name	OTTMUSG00000015743 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545471 MGI:3652219
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545472 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545472
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 177 ESTs, 23 Proteins

name	Cst7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13011 MGI:1298217
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310001A20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71881 MGI:1919131
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acss1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68738 MGI:1915988
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Vsx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114889 MGI:1890816
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Entpd6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12497 MGI:1202295
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043605 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043605
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Pygb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110078 MGI:97828
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abhd12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76192 MGI:1923442
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gins1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69270 MGI:1916520
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 53 ESTs, 3 Proteins

name	LOC668925 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668925
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	4930519N13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78177 MGI:1925427
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668926 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668926
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 6 Proteins pseudo : _no_value

name	Nanp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67311 MGI:1914561
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC433486 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433486
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 1 EST, 39 Proteins

name	LOC381390 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:381390
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 2 ESTs, 38 Proteins

name	LOC433483 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250044 GeneID:433483
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 1 Protein product : similar to Cystatin-related protein 1 precursor (CRP-1) (Prostatic 22 kDa glycoprotein P22K16/P22K20) (Androgen-regulated 20 kDa protein) transcript_id : XM_485074.4

name	Cst10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892337 GeneID:58214 MGI:1930004
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cystatin 10 (chondrocytes) transcript_id : NM_021405.2

name	C530025M09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94367298 GeneID:319470 MGI:2442090
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs product : RIKEN cDNA C530025M09 gene transcript_id : XM_893535.2

name	OTTMUSG00000015750 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250196 GeneID:433485 MGI:3702158
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 56 ESTs, 3 Proteins product : predicted gene, OTTMUSG00000015750, transcript variant 1 transcript_id : XM_485077.5

name	Zfp120 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91064881 GeneID:104348 MGI:1345179
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 120 transcript_id : NM_023266.4

name	Zfp120 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91064879 GeneID:104348 MGI:1345179
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 120 transcript_id : NM_181266.2

name	EG245174 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250048 GeneID:245174 MGI:3644476
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 2 Proteins product : predicted gene, EG245174 transcript_id : XM_893600.3

name	3300002I08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21746148 GeneID:69277 MGI:1916527
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3300002I08 gene transcript_id : NM_027017.1

name	OTTMUSG00000015730 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250198 GeneID:668923 MGI:3651999
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 1 Protein product : predicted gene, OTTMUSG00000015730 transcript_id : XM_001481090.1

name	OTTMUSG00000015743 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367199 GeneID:545471 MGI:3652219
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, OTTMUSG00000015743 transcript_id : NM_001034900.2

name	LOC545472 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250050 GeneID:545472
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 177 ESTs, 23 Proteins product : similar to BTB (POZ) domain containing 1 transcript_id : XM_619824.4

name	Cst7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892388 GeneID:13011 MGI:1298217
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cystatin F (leukocystatin) transcript_id : NM_009977.2

name	2310001A20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802875 GeneID:71881 MGI:1919131
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310001A20 gene transcript_id : NM_027977.2

name	Acss1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:18034772 GeneID:68738 MGI:1915988
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acyl-CoA synthetase short-chain family member 1 transcript_id : NM_080575.1

name	Vsx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254121 GeneID:114889 MGI:1890816
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : visual system homeobox 1 homolog (zebrafish) transcript_id : NM_054068.2

name	Entpd6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802024 GeneID:12497 MGI:1202295
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ectonucleoside triphosphate diphosphohydrolase 6 transcript_id : NM_172117.3

name	LOC100043605 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250052 GeneID:100043605
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043605 transcript_id : XM_001480518.1

name	Pygb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24418918 GeneID:110078 MGI:97828
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : brain glycogen phosphorylase transcript_id : NM_153781.1

name	Abhd12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130714 GeneID:76192 MGI:1923442
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : abhydrolase domain containing 12 transcript_id : NM_024465.2

name	Gins1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250201 GeneID:69270 MGI:1916520
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 53 ESTs, 3 Proteins product : GINS complex subunit 1 (Psf1 homolog), transcript variant 1 transcript_id : XM_130416.6

name	4930519N13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46402161 GeneID:78177 MGI:1925427
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930519N13 gene transcript_id : NM_207204.1

name	Nanp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385585 GeneID:67311 MGI:1914561
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : N-acetylneuraminic acid phosphatase transcript_id : NM_026086.1

name	LOC433486 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94367310 GeneID:433486
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 1 EST, 39 Proteins product : serine/threonine kinase transcript_id : XM_485079.3

name	LOC381390 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250203 GeneID:381390
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 2 ESTs, 38 Proteins product : hypothetical LOC381390 transcript_id : XM_355352.4

name	LOC433483 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250045 GeneID:433483
definition	codon_start : 1 product : similar to Cystatin-related protein 1 precursor (CRP-1) (Prostatic 22 kDa glycoprotein P22K16/P22K20) (Androgen-regulated 20 kDa protein) protein_id : XP_485074.3

name	Cst10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946758 CCDS:CCDS16853.1 GeneID:58214 MGI:1930004
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0004869 - cysteine protease inhibitor activity [Evidence IEA] codon_start : 1 product : cystatin 10 (chondrocytes) protein_id : NP_067380.1

name	C530025M09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82887150 GeneID:319470 MGI:2442090
definition	codon_start : 1 product : hypothetical protein LOC319470 protein_id : XP_898628.1

name	OTTMUSG00000015750 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51706417 GeneID:433485 MGI:3702158
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_485077.1

name	Zfp120 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:91064880 GeneID:104348 MGI:1345179
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : zinc finger protein 120 isoform 1 protein_id : NP_851783.2

name	Zfp120 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:91064882 GeneID:104348 MGI:1345179
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : zinc finger protein 120 isoform 2 protein_id : NP_075755.4

name	EG245174 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250049 GeneID:245174 MGI:3644476
definition	codon_start : 1 product : similar to novel zinc fingerprotein protein_id : XP_898693.3

name	3300002I08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229083 GeneID:69277 MGI:1916527
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : hypothetical protein LOC69277 protein_id : NP_081293.2

name	OTTMUSG00000015730 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250199 GeneID:668923 MGI:3651999
definition	codon_start : 1 product : similar to Predicted gene, OTTMUSG00000015730 protein_id : XP_001481140.1

name	OTTMUSG00000015743 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:77861899 GeneID:545471 MGI:3652219
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC545471 protein_id : NP_001030072.1

name	LOC545472 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:63492503 GeneID:545472
definition	codon_start : 1 product : similar to BTB (POZ) domain containing 1 protein_id : XP_619824.1

name	Cst7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753544 CCDS:CCDS16857.1 GeneID:13011 MGI:1298217
definition	GO_function : GO:0004869 - cysteine protease inhibitor activity [Evidence IEA]; GO:0004866 - endopeptidase inhibitor activity [Evidence IEA] codon_start : 1 note : cystatin 7; Leukocystatin; cystatin-like metastasis-associated protein product : cystatin F (leukocystatin) protein_id : NP_034107.1

name	2310001A20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313668 CCDS:CCDS16858.1 GeneID:71881 MGI:1919131
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016844 - strictosidine synthase activity [Evidence IEA] GO_process : GO:0009058 - biosynthesis [Evidence IEA] codon_start : 1 product : RIKEN cDNA 2310001A20 protein_id : NP_082253.1

name	Acss1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18034773 CCDS:CCDS16859.1 GeneID:68738 MGI:1915988
definition	GO_component : GO:0005759 - mitochondrial matrix [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0003987 - acetate-CoA ligase activity [Evidence IDA]; GO:0016208 - AMP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA] GO_process : GO:0006085 - acetyl-CoA biosynthesis [Evidence IDA] codon_start : 1 note : acetyl-Coenzyme A synthetase 2 (AMP forming)-like product : acetyl-CoA synthetase 2-like protein_id : NP_542142.1

name	Vsx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16905095 CCDS:CCDS16860.1 GeneID:114889 MGI:1890816
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0007601 - visual perception [Evidence IEA] codon_start : 1 product : visual system homeobox 1 homolog protein_id : NP_473409.1

name	Entpd6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83921570 CCDS:CCDS16861.1 GeneID:12497 MGI:1202295
definition	GO_component : GO:0005886 - plasma membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 note : CD39 antigen-like 2 product : ectonucleoside triphosphate diphosphohydrolase 6 protein_id : NP_742115.2

name	LOC100043605 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250053 GeneID:100043605
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480568.1

name	Pygb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24418919 CCDS:CCDS16862.1 GeneID:110078 MGI:97828
definition	GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0004645 - phosphorylase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0005977 - glycogen metabolism [Evidence IEA] codon_start : 1 product : brain glycogen phosphorylase protein_id : NP_722476.1

name	Abhd12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13277372 GeneID:76192 MGI:1923442
definition	codon_start : 1 product : abhydrolase domain containing 12 protein_id : NP_077785.1

name	Gins1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28487734 GeneID:69270 MGI:1916520
definition	codon_start : 1 product : GINS complex subunit 1 (Psf1 homolog) isoform 1 protein_id : XP_130416.2

name	4930519N13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402162 GeneID:78177 MGI:1925427
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC78177 protein_id : NP_997087.1

name	Nanp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385586 CCDS:CCDS16864.1 GeneID:67311 MGI:1914561
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0050124 - N-acylneuraminate-9-phosphatase activity [Evidence IEA] [Evidence ISS]; GO:0008967 - phosphoglycolate phosphatase activity [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0046380 - N-acetylneuraminate biosynthesis [Evidence ISS] codon_start : 1 product : haloacid dehalogenase-like hydrolase domain containing 4 protein_id : NP_080362.1

name	LOC433486 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:51706423 GeneID:433486
definition	codon_start : 1 product : hypothetical protein protein_id : XP_485079.1

name	LOC381390 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:38075170 GeneID:381390
definition	codon_start : 1 product : hypothetical protein protein_id : XP_355352.1

name	LOC100043593 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043593
definition	number : 4 pseudo : _no_value

name	LOC100043593 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043593
definition	number : 3 pseudo : _no_value

name	LOC100043593 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043593
definition	number : 2 pseudo : _no_value

name	LOC100043593 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043593
definition	number : 1 pseudo : _no_value

name	LOC668925 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668925
definition	number : 1 pseudo : _no_value

name	LOC383754 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250046 GeneID:383754
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : similar to RNA polymerase I transcription termination factor 1 pseudo : _no_value transcript_id : XR_034716.1

name	LOC241715 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250194 GeneID:241715
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins product : similar to chloride channel, nucleotide-sensitive, 1A pseudo : _no_value transcript_id : XR_034986.1

name	EG667048 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149250195 GeneID:667048 MGI:3643057
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 322 ESTs, 25 Proteins product : predicted gene, EG667048 pseudo : _no_value transcript_id : XR_034987.1

name	LOC279056 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250047 GeneID:279056
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins product : similar to XPMC2 prevents mitotic catastrophe 2 homolog pseudo : _no_value transcript_id : XR_034724.1

name	LOC100043832 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250197 GeneID:100043832
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 30 ESTs, 34 Proteins product : similar to protein phosphatase 1, catalytic subunit, gamma isoform pseudo : _no_value transcript_id : XR_034989.1

name	LOC668924 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250200 GeneID:668924
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 33 ESTs, 3 Proteins product : similar to RIKEN cDNA 1110005A03 gene pseudo : _no_value transcript_id : XR_034990.1

name	LOC668926 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250202 GeneID:668926
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 6 Proteins product : similar to 60S ribosomal protein L7a (Surfeit locus protein 3) pseudo : _no_value transcript_id : XR_034992.1

clone name	MSMg01-335E20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-123C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322J05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-198O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178J14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-333E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452P19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-498L03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-311H06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-539F24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-342L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481D24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-352J23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-420N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302D07
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-080H07.b	B6Ng01-080H07.g
ACC	DH895589	DH895590
length	1,056	1,170
definition	DH895589\|Mus musculus domesticus DNA, BAC clone: B6Ng01-080H07, 5' end.	DH895590\|Mus musculus domesticus DNA, BAC clone: B6Ng01-080H07, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcagctgaggaatattaaatgactgagaagcacctaaagaaatg ttcaatatccttagtcatcagagaaatacaaatcaaaacaaccctgagat tccacctcacaacagttaaaatggctaagatcaaaatctcaggtgacagc agatgctgacaaggatatggagaaagaggaacactcctccattgctggtg gaattacaagtgtacaaccactctggaaatcaatttggcagttcctcaga aaattcgaaatcgtactacctgaggacccagcactaccactcttgggcat atactcagaagatgctccaagatataacaaggacacatgttccactatgt tcataagcagccttatttataatagccagaagctggaaagaacccagatg tccttaaacagaggaatggatacagaaaatgtggtacatttacacaatgg agtactactcacctattaaaaacaatgaattcaataaattcattcttttt tattagatattttcttcattacatttcaaatgccatccccagagccccct ataccctcccccggccctgctccctaacccacccactcccgctccctggt cctggcattcccctgtactggggcatacgatcttcacaagaccaagggcg gctcttctcactgatggtcgactaggccatcctctgctacatatgcaact agagaaaaagctctgggggggggggtactagttagttcatattgttgttc catctatagggttgcagacccctttagtttcttgggtactttctcaagct ccttcattaggggccctgtgttccatccaataaattgaaagatcctgaca gaatgttaaaaggtcacagaaaccctgaaattggtaaatagattccattg ttagtagaagtagcttcactgatttagaaaatagaggtgcacttgctctg gccactccttgaacccgtgtgtctgccaatgttttgaccattccttgaac ccatttgtgtgcccactgatgaagcccatgtccaggtgttgttgtatatt ggttgt	gaattcagaaatcttgcttaactctgttatgtagctgggtaggagtgtgc tggggggacacagagtagttgcaagcagtggaatgtttctattgaggctt actgggctatcctagtaggtatttggaagactctgctgctgagagtgact tgtactgtgcagacctggcccaagatgtttcagtgaagaagaacttcagt atctggcctagagactgtttttggtgaagaagatgggtgctttatgccct tgtctgaagagtctacctgagactaaggtaaagagatttatattagttgt attgacaaaagaagtctttaaaaaaaatctcagcagagaccttgttctct tgttttgtcttatgaagagtgttttaatgaaaaggagcaagcaggaagga agagctacatccaagaaaagaggttcccattttccaactttattagaata tgtgtgttaatttgtactagaagtcattattcttctttctaagtggttca aggaagattaaaaaaaatagttgctatcagcacattcaaataggatgtca aggggctggagaagggtctcggtggttaagagtacaggctgctcttttag aggtcccagatttgaggcccagtatccacaggacacacatccatgtgtga ctccagttccatggtgatcaatcccacttttctggcctctacaaagcatc aggcatgcatgggacacatagatgtacatgcagtcaaaactgccatacac aaaaaatattaaataaaacaaatcctttctctcaaagttgaattcatcaa gctatttttatttctttctttattttttaaacaaccaaccgaatacataa atatgtaagtaagtaagtaagtaaataaataaataaataaataaataaat aagtgaatgggttggtgtcagagagtaagctggtggtagaaaaatatgtg atttgtggctgtttatgcctttgaacatgttttcagaaggtgagtggaaa ctgtgctgtagatgatagttgatgctgaagactgaagccatcttgttgaa actgaatgcatgtgctagatcactgtgttttgttggtaccatgcaatgat gaaatgtcattgagaaaatttaggaagataccgtaactactgtgacatgc agttacatctctgtctgtat
quality values	Open. 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Hide. 61 61 49 49 55 38 10 11 25 13 11 19 22 31 23 59 59 59 61 59 59 61 61 61 61 61 61 61 59 59 61 61 61 59 61 61 61 61 61 61 61 59 59 55 59 61 61 61 61 61 59 59 59 55 44 55 59 59 59 59 61 59 59 61 59 61 61 52 61 61 61 61 59 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 55 59 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 59 59 61 61 61 59 59 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 52 61 61 55 55 61 61 61 61 61 55 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 49 49 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 47 55 61 61 61 61 61 61 61 61 53 61 47 61 61 61 61 61 61 61 61 61 52 61 53 61 61 61 61 61 53 61 61 50 61 61 53 61 61 61 61 52 42 45 50 52 50 50 61 61 61 61 61 61 43 53 61 61 61 61 61 61 61 61 61 53 61 61 45 61 47 41 61 61 61 61 42 31 61 61 43 47 52 61 45 61 39 53 45 53 45 61 57 53 57 57 53 53 53 52 57 57 35 39 34 53 52 46 32 57 57 47 45 32 47 43 52 53 53 53 32 31 22 53 57 45 45 53 45 53 53 53 30 53 39 53 57 52 50 50 53 45 53 38 53 53 53 38 45 53 53 52 31 47 47 45 50 45 57 19 53 53 39 53 50 26 38 53 57 40 53 39 45 50 37 45 53 46 47 46 30 53 57 57 46 34 45 35 57 38 19 53 41 41 39 36 41 16 57 41 37 42 34 53 50 28 28 57 23 28 53 53 45 25 39 42 57 53 39 42 38 52 42 53 36 34 32 40 44 38 35 50 29 52 40 50 40 32 32 40 19 57 57 50 37 35 42 29 52 21 37 37 42 28 31 5 57 53 57 57 57 37 32 41 38 40 53 52 34 31 57 57 37 37 25 57 47 37 43 40 31 57 43 43 37 48 41 41 40 57 57 29 30 40 33 32 40 33 33 41 23 37 29 6 8 9 32 44 28 28 51 46 45 41 30 21 45 37 24 18 46 28 31 14 45 44 19 20 45 47 46 46 37 29 47 17 31 13 29 38 46 19 21 12 41 27 41 15 27 28 39 15 37 28 51 41 31 33 37 48 31 41 31 16 11 33 25 35 28 30 21 20 17 18 26 28 21 32 46 31 29 19 51 33 29 24 30 27 31 26 41 39 33 21 37 26 18 20 46 28 24 17 43 16 31 27 28 29 35 29 23 28 19 33 46 25 11 6 31 28 14 39 18 34 25 18 46 51 26 18 28 13 13 6 7 29 21 33 14 28 17 7 6 14 19 51 51 51 33 25 31 26 29 12 23 51 22 51 33 20 9 5 36 18 16 11 6 46 39 9 9 15 23 28 29 38 25 20 29 22 17 34 18 38 21 51 38 22 30 9 27 16 16 8 33 17 19 16 7 5 5 25 27 42 32 29 16 26 19 31 34 33 29 15 14 7 30 18 15 33 14 8 13 11 8 9 29 14 22 23 28 15 33 29 7 21 9 6 4 4 5 11 5 21 5 29 4 5 10 26 26 31 20 24 29 29 23 12 13 7 14 15 18 18 13 12 13 4 14 17 26 10 5 13 12 30 13 12 6 7 7 11 9 6 6 6 16 9 10 12 24 8 14 4 2 1 4 10 5 5 2 3 4 9 2 4 14 9 3 1 3 3 5 5 7 11 5 4 4 4 1 18 9 6 8 12 5 13 17 4 11 4 17 12 5 13 5 3 3 3 4 8 6 7 17 5 21 4 8 7 5 4 7 5 5 6 13 4 8 8 7 3 5 6 6 4 2 7 7 9 10 8 6 4 13

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_149963992_149965205
seq2: B6Ng01-080H07.g_66_1235

seq1  GAATTCAGAAATCTTGCTTAACTCTGTTATGTAGCTGGGTAGGAGTGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAATCTTGCTTAACTCTGTTATGTAGCTGGGTAGGAGTGTGC  50

seq1  TGGGGGGACACAGAGTAGTTGCAAGCAGTGGAATGTTTCTATTGAGGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGGACACAGAGTAGTTGCAAGCAGTGGAATGTTTCTATTGAGGCTT  100

seq1  ACTGGGCTATCCTAGTAGGTATTTGGAAGACTCTGCTGCTGAGAGTGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGCTATCCTAGTAGGTATTTGGAAGACTCTGCTGCTGAGAGTGACT  150

seq1  TGTACTGTGCAGACCTGGCCCAAGATGTTTCAGTGAAGAAGAACTTCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGTGCAGACCTGGCCCAAGATGTTTCAGTGAAGAAGAACTTCAGT  200

seq1  ATCTGGCCTAGAGACTGTTTTTGGTGAAGAAGATGGGTGCTTTATGCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGCCTAGAGACTGTTTTTGGTGAAGAAGATGGGTGCTTTATGCCCT  250

seq1  TGTCTGAAGAGTCTACCTGAGACTAAGGTAAAGAGATTTATATTAGTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGAAGAGTCTACCTGAGACTAAGGTAAAGAGATTTATATTAGTTGT  300

seq1  ATTGACAAAAGAAGTCTTTAAAAAAAATCTCAGCAGAGACCTTGTTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACAAAAGAAGTCTTTAAAAAAAATCTCAGCAGAGACCTTGTTCTCT  350

seq1  TGTTTTGTCTTATGAAGAGTGTTTTAATGAAAAGGAGCAAGCAGGAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTCTTATGAAGAGTGTTTTAATGAAAAGGAGCAAGCAGGAAGGA  400

seq1  AGAGCTACATCCAAGAAAAGAGGTTCCCATTTTCCAACTTTATTAGAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTACATCCAAGAAAAGAGGTTCCCATTTTCCAACTTTATTAGAATA  450

seq1  TGTGTGTTAATTTGTACTAGAAGTCATTATTCTTCTTTCTAAGTGGTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTAATTTGTACTAGAAGTCATTATTCTTCTTTCTAAGTGGTTCA  500

seq1  AGGAAGATTAAAAAAAATAGTTGCTATCAGCACATTCAAATAGGATGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGATTAAAAAAAATAGTTGCTATCAGCACATTCAAATAGGATGTCA  550

seq1  AGGGGCTGGAGAAGGGTCTCGGTGGTTAAGAGTACAGGCTGCTCTTTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCTGGAGAAGGGTCTCGGTGGTTAAGAGTACAGGCTGCTCTTTTAG  600

seq1  AGGTCCCAGATTTGAGGCCCAGTATCCACAGGACACACATCCATGTGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCCAGATTTGAGGCCCAGTATCCACAGGACACACATCCATGTGTGA  650

seq1  CTCCAGTTCCATGGTGATCAATCCCACTTTTCTGGCCTCTACAAAGCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTTCCATGGTGATCAATCCCACTTTTCTGGCCTCTACAAAGCATC  700

seq1  AGGCATGCATGGGACACATAGATGTACATGCAGTCAAAACTGCCATACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGCATGGGACACATAGATGTACATGCAGTCAAAACTGCCATACAC  750

seq1  AAAAAATATTAAATAAAACAAATCCTTTCTCTCAAAAGTTGAATTCATCA  800
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AAAAAATATTAAATAAAACAAATCCTTTCTCTC-AAAGTTGAATTCATCA  799

seq1  GGCTATTTTTATTTCTTTCTTTA-TTTTTAAACAACCAACCGAATACATA  849
       |||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGCTATTTTTATTTCTTTCTTTATTTTTTAAACAACCAACCGAATACATA  849

seq1  AATATGTAAGTAAGTAAGTAAGTAAATAAATAAATAAATAAATAAATAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTAAGTAAGTAAGTAAGTAAATAAATAAATAAATAAATAAATAAA  899

seq1  TAAGTGAATGGGTTGGTGTCAGAGGAGTAAGGCTGGTGGTAGGAAAAAAT  949
      ||||||||||||||||||||||| |||||| |||||||||||  ||||||
seq2  TAAGTGAATGGGTTGGTGTCAGA-GAGTAA-GCTGGTGGTAG--AAAAAT  945

seq1  AATGTGAATTTGTGGCTGTTTATGCCTTTGAACAATGTTTTCAGGAGAGG  999
       ||||| |||||||||||||||||||||||||| ||||||||   ||| |
seq2  -ATGTG-ATTTGTGGCTGTTTATGCCTTTGAAC-ATGTTTTC---AGAAG  989

seq1  GTGAAGGTGGAAAACTGTGCTGTAGATGATAGTGAATGCTGAAAGACTGA  1049
      ||||  |||| ||||||||||||||||||||||  |||||| ||||||  
seq2  GTGA--GTGG-AAACTGTGCTGTAGATGATAGTTGATGCTG-AAGACT--  1033

seq1  GAGGCCATTCTTGTTGAAAACTGAATGCATGGTGCTAGAATCACTGTGTC  1099
      || |||| |||||||| ||||||||||||| ||||||| |||||||||| 
seq2  GAAGCCA-TCTTGTTG-AAACTGAATGCAT-GTGCTAG-ATCACTGTGTT  1079

seq1  TGTTGGGTAAACATATGCACATGAATGAAAGTGTCCATGAAGGACAAAAA  1149
      |  | ||||     ||||| ||| |||||| ||||  |||      ||||
seq2  TTGTTGGTA---CCATGCA-ATG-ATGAAA-TGTCATTGA-----GAAAA  1118

seq1  TTAATGGGAAGAATTTACCCTGTAGCTACTGTGACATGCAGGTTTAACCT  1199
      ||  | ||||||   ||||  ||| ||||||||||||||||  |||    
seq2  TT--TAGGAAGA---TACC--GTAACTACTGTGACATGCAG--TTA---C  1156

seq1  ATCTCTTGTCTGTAT  1214
      ||||| |||||||||
seq2  ATCTC-TGTCTGTAT  1170

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information