BAC Information

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BAC

Clone NameB6Ng01-080I14
Chromosome2 (Build37)
Map Location 15,042,480 - 15,043,596
singlet/doubletsinglet
Overlap genenone
Upstream geneStam, 2010003H20Rik, Mrc1, Slc39a12, Cacnb2, LOC100041164, LOC625335, LOC625342, LOC100041220, Nsun6, Arl5b
Downstream geneLOC633061, LOC667329, LOC227588, LOC625457
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080I14.bB6Ng01-080I14.g
ACCDH895648DH895649
length1,1131,051
definitionDH895648|Mus musculus domesticus DNA, BAC clone: B6Ng01-080I14, 5' end.DH895649|Mus musculus domesticus DNA, BAC clone: B6Ng01-080I14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaatgcatttttcatctatatttactttaagcttgtgcttgct
tagcttgcattcctacttagcactattgcaaaagaatgtctatttcatgt
taatataagcagttatctactaattaatttgtattaccaacatgtgacta
aaggaaaaatttatgtaccaggcgcttattcaaaactaatcatagaagaa
actcaagttattagaatatttattataaagaacagtttctttgtatttat
catccttgaatacatccctgtagttaaagaacacatagggtaataaatag
ccttatcagagggtagggcttaaccttatttgagaactaacagtacttgc
tggagctgcagaagttcaatgataaggcagagagaaaggttcttggggca
gataaggtctttctagtgaagagcagctcctttgtggtggtgcagagaaa
gaaggaacaggagaaatggaacagaatgggaggaggagctgatttttatc
cctctgtggttttctcctctctaggaaatagattgtaaagtccataagat
actatactagctttcttgtcactgacttctgagttgcatttccagacatg
actgctaagttccaacttcattagcttatttcacagctgattcatggttt
accttcccacctcagtgccactgcatagtttatagtgtccttgcgcaagg
tctaatacaaaccctaagctggttcaaactttcccagacagtattttgtc
agttgaaattcacatggtctctcctctgcataacccatataccatggtta
ctttgtttgtcctaatgcacagatgtctaagaatgtcctgagcattccct
gtcttcagtgctataatgtgaaagaagcattgcatataattcatattggg
ataggtcacatctactatggtgattcaacctcatgagtctggggatttgg
aataacagatgttgactgttaggaacaggttaggaagttagctttttgga
ggattttgagtctggggatgagctttgagtttccaaaagacccccatttg
agttatgctctctgcctcctgctgtggaagagaatgtgaactttcgtttg
ctgaccagccacc
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaagttcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataattttgttaaacacatgaaactcaa
gaagaatgaagactgaagtgtggacactatgcccctccttagatttggga
acaaaacacccatggaaggagtttacagagccaaagtttggagctgagat
gaaaggatggaccatgtagagactgccatatccagggatccaccccataa
tcagcatccaaacgctgacaccatttgcatacactagcaagattttattg
aaaggacccagatgtaagctgtctcttgtgagactatgccggggcctagc
aaacacagaagtggatgctcacagtcgcttatggatggatcataggctcc
caatggagagctagagaagtagccaagagctaaggatctgcaacctatag
tggacacttatgactaccagtacccgtacttttgattcatcgcatatata
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_15042480_15043596
seq2: B6Ng01-080I14.b_34_1146 (reverse)

seq1  GGTGGCTGTATCAGCAAACAAAAGTTCACA-TCTCTATCCACAAGCAAGA  49
      ||||||||  ||||||||| |||||||||| ||||| ||||| |||| ||
seq2  GGTGGCTG-GTCAGCAAACGAAAGTTCACATTCTCT-TCCAC-AGCAGGA  47

seq1  GGCAGAGAGCACTAACTCAAAATGGGGGTCTTTTGGAAACCTCAAAGCTC  99
      ||||||||||| |||||| |||||||||||||||||||| ||||||||||
seq2  GGCAGAGAGCA-TAACTC-AAATGGGGGTCTTTTGGAAA-CTCAAAGCTC  94

seq1  ATCCCCAGACTCATATTCCTCCAAAAAGCTTACCTTCCTAACCTGTTCCT  149
      ||||||||||||| | ||||||||||||| || |||||||||||||||||
seq2  ATCCCCAGACTCAAAATCCTCCAAAAAGC-TAACTTCCTAACCTGTTCCT  143

seq1  AACAGTCACCATCTGTTATTTCAAATTCCCAAGACTCATGAGGTTGAATC  199
      |||||||| ||||||||||| |||| |||| |||||||||||||||||||
seq2  AACAGTCAACATCTGTTATTCCAAA-TCCCCAGACTCATGAGGTTGAATC  192

seq1  ACCATAGTAGATGTGACCTAT-CCAATATGAATTATATGCAATGCTTCTT  248
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACCATAGTAGATGTGACCTATCCCAATATGAATTATATGCAATGCTTCTT  242

seq1  TCACATTATAGCACTG-AGACAGGGAATGCTCAGGACATTCTTAGACATC  297
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TCACATTATAGCACTGAAGACAGGGAATGCTCAGGACATTCTTAGACATC  292

seq1  TGTGCATTAGGACAAAC-AAGTAACCATGGTATATGGGTTATGCAGAGGA  346
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGTGCATTAGGACAAACAAAGTAACCATGGTATATGGGTTATGCAGAGGA  342

seq1  GAGACCATGTGAATTTCAACTGACAAAATACTGTCTGGGAAAGTTTGAAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCATGTGAATTTCAACTGACAAAATACTGTCTGGGAAAGTTTGAAC  392

seq1  CAGCTTAGGGTTTGTATTAGACCTTGCGCAAGGACACTATAAACTATGCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTAGGGTTTGTATTAGACCTTGCGCAAGGACACTATAAACTATGCA  442

seq1  GTGGCACTGAGGTGGGAAGGTAAACCATGAATCAGCTGTGAAATAAGCTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCACTGAGGTGGGAAGGTAAACCATGAATCAGCTGTGAAATAAGCTA  492

seq1  ATGAAGTTGGAACTTAGCAGTCATGTCTGGAAATGCAACTCAGAAGTCAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTTGGAACTTAGCAGTCATGTCTGGAAATGCAACTCAGAAGTCAG  542

seq1  TGACAAGAAAGCTAGTATAGTATCTTATGGACTTTACAATCTATTTCCTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAGAAAGCTAGTATAGTATCTTATGGACTTTACAATCTATTTCCTA  592

seq1  GAGAGGAGAAAACCACAGAGGGATAAAAATCAGCTCCTCCTCCCATTCTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAGAAAACCACAGAGGGATAAAAATCAGCTCCTCCTCCCATTCTG  642

seq1  TTCCATTTCTCCTGTTCCTTCTTTCTCTGCACCACCACAAAGGAGCTGCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTCTCCTGTTCCTTCTTTCTCTGCACCACCACAAAGGAGCTGCT  692

seq1  CTTCACTAGAAAGACCTTATCTGCCCCAAGAACCTTTCTCTCTGCCTTAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTAGAAAGACCTTATCTGCCCCAAGAACCTTTCTCTCTGCCTTAT  742

seq1  CATTGAACTTCTGCAGCTCCAGCAAGTACTGTTAGTTCTCAAATAAGGTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAACTTCTGCAGCTCCAGCAAGTACTGTTAGTTCTCAAATAAGGTT  792

seq1  AAGCCCTACCCTCTGATAAGGCTATTTATTACCCTATGTGTTCTTTAACT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCTACCCTCTGATAAGGCTATTTATTACCCTATGTGTTCTTTAACT  842

seq1  ACAGGGATGTATTCAAGGATGATAAATACAAAGAAACTGTTCTTTATAAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGATGTATTCAAGGATGATAAATACAAAGAAACTGTTCTTTATAAT  892

seq1  AAATATTCTAATAACTTGAGTTTCTTCTATGATTAGTTTTGAATAAGCGC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTCTAATAACTTGAGTTTCTTCTATGATTAGTTTTGAATAAGCGC  942

seq1  CTGGTACATAAATTTTTCCTTTAGTCACATGTTGGTAATACAAATTAATT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTACATAAATTTTTCCTTTAGTCACATGTTGGTAATACAAATTAATT  992

seq1  AGTAGATAACTGCTTATATTAACATGAAATAGACATTCTTTTGCAATAGT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGATAACTGCTTATATTAACATGAAATAGACATTCTTTTGCAATAGT  1042

seq1  GCTAAGTAGGAATGCAAGCTAAGCAAGCACAAGCTTAAAGTAAATATAGA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGTAGGAATGCAAGCTAAGCAAGCACAAGCTTAAAGTAAATATAGA  1092

seq1  TGAAAAATGCATTCTGAATTC  1117
      |||||||||||||||||||||
seq2  TGAAAAATGCATTCTGAATTC  1113