BAC Information

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BAC

Clone NameB6Ng01-080O22
Chromosome2 (Build37)
Map Location 12,653,778 - 12,682,851
singlet/doubletdoublet
Overlap genenone
Upstream geneIl15ra, Fbxo18, Ankrd16, EG635919, LOC667247, Itga8, 2310047O13Rik
Downstream geneLOC100040837, Pter, C1ql3, Rsu1, Cubn, Trdmt1, Vim, St8sia6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080O22.bB6Ng01-080O22.g
ACCDH895934DH895935
length7581,075
definitionDH895934|Mus musculus domesticus DNA, BAC clone: B6Ng01-080O22, 5' end.DH895935|Mus musculus domesticus DNA, BAC clone: B6Ng01-080O22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,682,302 - 12,682,851)(12,653,778 - 12,654,884)
sequence
gaattccacattgccactcatcccctcaagactcagacacagcaggttaa
aaggaaaattacgatgttcttggggcagctgatctagactagaataatga
aattgcacgtgacaccacagtggatgttaagaacacgtctgaagtgtgga
agagccttagggcatccctcattactaccatcccttcctgatcatcaagt
acactataaaactgcaaagatccgatttgtgtagtattaccaatagctca
aacacttcaggatagaagttttaggtcgctccaccaggtaaagggctgtg
attagctatgacgttagcttgggtggtagaaaaaggtaatttaaatctca
gctataattgcattagcagttacagaaatgaaaatataatttaattattc
attataaacattcatacgtacacatatatattattaatcaaatatcaaag
atctttgctttcttgcctgcattgattataatgccattggtcaccatgag
caaaaatatttctagttcagtgataaacagaaagaaagggagaatcacac
gtcacagctgacacaatatgaaaggacaagaatgtaaacataaacttcta
acaaacccagaagagaagacaaaacctgaaaggtcaaaattgcagtgttt
ttccataagccaaaggagtttcagcttatttcattgtagacaaggggatc
aggaaacgctgaaaaaattaagtaagtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtg
gaattcactaagatttatgaaacatctcctaattatgcttgcttgggatg
cttttcataaccagatagattcagagagaaatggaagaatcaaaacatcg
attacttcagcacacgttagctgtggtaatattttagattaagtagtttt
atttaatcatatgcttgagtaagtttgtgaataagagcttgaagctgcag
acagtggaaagtagttagtagataatccaacaagccaactcaatctgtgt
gtatgaacaatcagcgcaacccaattttcagaaaaaaagctgacttaatt
tttcagttagaatatgcacagtgtgaattgatgacaaaaattttaaaatt
aaaatatgtggtataatttactatctatatcaccacaaattaataaaaat
atgaaaacaaaatttccttgtctaacctatgtaagcgaatatattatctt
gttaaaaatataatttatttatgaactaagacatatctccatatgcatat
ataatattttacttattatgtatacacacgcatgagaacacatttacact
ttttttttttttttttagaccaggctgtccttgaactcagaaattcgcct
gcctctgcctccggagtgctggaattgaaggagtgtgccaccatacccaa
ctacacatttacactttaaagcctagaataacagcataaatatattgaaa
tgttacagttgtattttaatacttcgtgacaaaagtctactggtaaaaga
taactggttgtgattttatattttagtaacaaggtagaaaatataaaact
ttttaaaatattaaataatttactactatactggacagaataattctgtg
atggtgcaattttatgtaatataaaggttcattttctaccagttttcagt
gtgtgtatatatatcagtatctgactctacacagatagcctggatttttt
tatgatagctgattttgtgagatcactctgatgctgattcagtgctagca
ctgtgtcaggatttatagttaaaatattatatatctgaattgatagcaat
ttgactattatgtatatccagacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_12682302_12682851
seq2: B6Ng01-080O22.b_255_804 (reverse)

seq1  CACACACACACACACACACACACACACACACACTTACTTAATTTTTTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACTTACTTAATTTTTTCAG  50

seq1  CGTTTCCTGATCCCCTTGTCTACAATGAAATAAGCTGAAACTCCTTTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTCCTGATCCCCTTGTCTACAATGAAATAAGCTGAAACTCCTTTGGC  100

seq1  TTATGGAAAAACACTGCAATTTTGACCTTTCAGGTTTTGTCTTCTCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGAAAAACACTGCAATTTTGACCTTTCAGGTTTTGTCTTCTCTTCT  150

seq1  GGGTTTGTTAGAAGTTTATGTTTACATTCTTGTCCTTTCATATTGTGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGTTAGAAGTTTATGTTTACATTCTTGTCCTTTCATATTGTGTCA  200

seq1  GCTGTGACGTGTGATTCTCCCTTTCTTTCTGTTTATCACTGAACTAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGACGTGTGATTCTCCCTTTCTTTCTGTTTATCACTGAACTAGAAA  250

seq1  TATTTTTGCTCATGGTGACCAATGGCATTATAATCAATGCAGGCAAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTGCTCATGGTGACCAATGGCATTATAATCAATGCAGGCAAGAAA  300

seq1  GCAAAGATCTTTGATATTTGATTAATAATATATATGTGTACGTATGAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGATCTTTGATATTTGATTAATAATATATATGTGTACGTATGAATG  350

seq1  TTTATAATGAATAATTAAATTATATTTTCATTTCTGTAACTGCTAATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAATGAATAATTAAATTATATTTTCATTTCTGTAACTGCTAATGCA  400

seq1  ATTATAGCTGAGATTTAAATTACCTTTTTCTACCACCCAAGCTAACGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGCTGAGATTTAAATTACCTTTTTCTACCACCCAAGCTAACGTCA  450

seq1  TAGCTAATCACAGCCCTTTACCTGGTGGAGCGACCTAAAACTTCTATCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTAATCACAGCCCTTTACCTGGTGGAGCGACCTAAAACTTCTATCCT  500

seq1  GAAGTGTTTGAGCTATTGGTAATACTACACAAATCGGATCTTTGCAGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTTTGAGCTATTGGTAATACTACACAAATCGGATCTTTGCAGTTT  550

seq1: chr2_12653778_12654884
seq2: B6Ng01-080O22.g_70_1144

seq1  GAATTCACTAAGATTTATGAAACATCTCCTAATTATGCTTGCTTGGGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAAGATTTATGAAACATCTCCTAATTATGCTTGCTTGGGATG  50

seq1  CTTTTCATAACCAGATAGATTCAGAGAGAAATGGAAGAATCAAAACATCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCATAACCAGATAGATTCAGAGAGAAATGGAAGAATCAAAACATCG  100

seq1  ATTACTTCAGCACACGTTAGCTGTGGTAATATTTTAGATTAAGTAGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTCAGCACACGTTAGCTGTGGTAATATTTTAGATTAAGTAGTTTT  150

seq1  ATTTAATCATATGCTTGAGTAAGTTTGTGAATAAGAGCTTGAAGCTGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATCATATGCTTGAGTAAGTTTGTGAATAAGAGCTTGAAGCTGCAG  200

seq1  ACAGTGGAAAGTAGTTAGTAGATAATCCAACAAGCCAACTCAATCTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGAAAGTAGTTAGTAGATAATCCAACAAGCCAACTCAATCTGTGT  250

seq1  GTATGAACAATCAGCGCAACCCAATTTTCAGAAAAAAAGCTGACTTAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAACAATCAGCGCAACCCAATTTTCAGAAAAAAAGCTGACTTAATT  300

seq1  TTTCAGTTAGAATATGCACAGTGTGAATTGATGACAAAAATTTTAAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTTAGAATATGCACAGTGTGAATTGATGACAAAAATTTTAAAATT  350

seq1  AAAATATGTGGTATAATTTACTATCTATATCACCACAAATTAATAAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATGTGGTATAATTTACTATCTATATCACCACAAATTAATAAAAAT  400

seq1  ATGAAAACAAAATTTCCTTGTCTAACCTATGTAAGCGAATATATTATCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAACAAAATTTCCTTGTCTAACCTATGTAAGCGAATATATTATCTT  450

seq1  GTTAAAAATATAATTTATTTATGAACTAAGACATATCTCCATATGCATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAAATATAATTTATTTATGAACTAAGACATATCTCCATATGCATAT  500

seq1  ATAATATTTTACTTATTATGTATACACACGCATGAGAACACATTTACACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATTTTACTTATTATGTATACACACGCATGAGAACACATTTACACT  550

seq1  TTTTTTTTTTTTTTTTAGACCAGGCTGTCCTTGAACTCAGAAATTCGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTAGACCAGGCTGTCCTTGAACTCAGAAATTCGCCT  600

seq1  GCCTCTGCCTCCGGAGTGCTGGAATTGAAGGAGTGTGCCACCATACCCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGCCTCCGGAGTGCTGGAATTGAAGGAGTGTGCCACCATACCCAA  650

seq1  CTACACATTTACACTTTAAAGCCTAGAATAACAGCATAAATATATTGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACATTTACACTTTAAAGCCTAGAATAACAGCATAAATATATTGAAA  700

seq1  TGTTACAGTTGTATTTTAATACTTCGTGACAAAAGTCTACTGGTAAAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACAGTTGTATTTTAATACTTCGTGACAAAAGTCTACTGGTAAAAGA  750

seq1  TAACTGGTTGTGATTTTATATTTTAGTAACAAGGTAGAAAATATAAAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGGTTGTGATTTTATATTTTAGTAACAAGGTAGAAAATATAAAACT  800

seq1  TTTTAAAATATTAAATAATTTACTACTATACTGGACAGAATAATTCTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAATATTAAATAATTTACTACTATACTGGACAGAATAATTCTGTG  850

seq1  ATGGTGCAATTTTATGTAATATAAAGGTTCATTTTTCTACCAGTTTTCAG  900
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATGGTGCAATTTTATGTAATATAAAGGTTCA-TTTTCTACCAGTTTTCAG  899

seq1  TGTGGTGTATATATATCAGTATCTGACTCTACCACAGGATAGCCTGGAAT  950
      ||| ||||||||||||||||||||||||||| |||| ||||||||||| |
seq2  TGT-GTGTATATATATCAGTATCTGACTCTA-CACA-GATAGCCTGGATT  946

seq1  TTTTTATGATAGCCTTGATTTTGTGGAGATCCACCTCTGAATGCTGATAT  1000
      |||||||||||||  ||||||||| ||||||   ||||| |||||||| |
seq2  TTTTTATGATAGC--TGATTTTGT-GAGATC--ACTCTG-ATGCTGAT-T  989

seq1  CAGTGGCCTAAGCCACTGTGTCAAGAATTTTTTATAGGTTAAAAATTATT  1050
      |||||  |||   |||||||||| ||    |||||| |||||||     |
seq2  CAGTG--CTA--GCACTGTGTCAGGA----TTTATA-GTTAAAA-----T  1025

seq1  ATTAATTATCTGATTTGATAGCAATTTTGAACTAATTTATGTATAACCCA  1100
      ||||  ||||||| |||||||||||||   ||||  ||||||||| |   
seq2  ATTATATATCTGAATTGATAGCAATTT--GACTA--TTATGTATATC---  1068

seq1  CAGACTA  1107
      |||||||
seq2  CAGACTA  1075