BAC Information

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BAC

Clone NameB6Ng01-081A13
Chromosome2 (Build37)
Map Location 111,853,540 - 111,854,056
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668802, LOC623270, LOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310
Downstream geneOlfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5, Aven, Ryr3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081A13.bB6Ng01-081A13.g
ACCDH896002DH896003
length1,110517
definitionDH896002|Mus musculus domesticus DNA, BAC clone: B6Ng01-081A13, 5' end.DH896003|Mus musculus domesticus DNA, BAC clone: B6Ng01-081A13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggacaggtaaagatcctgtcccaatctgttggtgacct
ttttgtcttattgacagtgtcttttgccttacagaggctttgcagtttta
taaggtcccatttgtcaattttcgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtgcccatatcttcgagccttttccctac
tttcctctctataagtttcagtgtctctggttttatgtgtagttccttaa
tccacttagatttgcccttagtataaggagataggaatggataaatttgc
attcttctacatgataaccgctagttgtgccagcaccattttttgaaaat
gtgtcttttttccactggatgggttttgctcccttgtcaaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcagttctattccattggt
ccacttgtctgtcactataccagtaccatgcaggtttttttttttttttt
tatcacaattgctctgtagtacagctttaggtcaggcatggtgattccac
cagaggttcttttatccttgagaagagtttttgctatcctaggtttttgt
tattccagatgaatttgcagattgctctttctaattcattgaagaattaa
gttggaattttgatgggcattgcactgaatctgtagattttggcaagata
gccatttttacaatgttgatcctgccaatccatgagcatgggagatcttt
ccatcttctgagatcttctttaatttctttcttcagagacttgaagttct
tatcatacagatctttcacttccttagttagagtcatgccaaggtatttt
atattatttgtgactattgagagggggttgtttccctaatttcttctcag
ctggttatcttgggtgagaaaggccattgacttgttggagtcatttatat
cagttacttcactgagcttgtttccagtttaggagtcctgtgggatttaa
gtgactcatt
gaattcctcagaaataaatagccaaaacatgctccatcatcccacagcga
cacttgctcactatgttcatagcagttttatttacaatagagagagacta
gagacaacctaaatgtccctcaactgaagaatggataaagaaaatgtgat
acaaaacaaaaggatggactatccagagactacccaacttggggatccat
cccataatcagccaccaaacccagacactagtgcatatgccagcaagatt
ttgctgaagggaccctgatactgtcttgtatgagtctatgccagtgcctg
gcaaatacagaagtggatgctcacaatcatctataggatggaacacaggg
cccccaatggagaagctagagaaagcactcaaggagctgaagaggtctgc
aaccctataggtggaacaacaatatgaactaaccagtactcccagagttc
gtgtctctagctgcatatgtagcagaagatggcctagtcggccttcattg
ggaaaagagtccctttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_111853540_111854056
seq2: B6Ng01-081A13.g_71_587

seq1  GAATTCCTCAGAAATAAATAGCCAAAACATGCTCCATCATCCCACAGCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCAGAAATAAATAGCCAAAACATGCTCCATCATCCCACAGCGA  50

seq1  CACTTGCTCACTATGTTCATAGCAGTTTTATTTACAATAGAGAGAGACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGCTCACTATGTTCATAGCAGTTTTATTTACAATAGAGAGAGACTA  100

seq1  GAGACAACCTAAATGTCCCTCAACTGAAGAATGGATAAAGAAAATGTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAACCTAAATGTCCCTCAACTGAAGAATGGATAAAGAAAATGTGAT  150

seq1  ACAAAACAAAAGGATGGACTATCCAGAGACTACCCAACTTGGGGATCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAAAGGATGGACTATCCAGAGACTACCCAACTTGGGGATCCAT  200

seq1  CCCATAATCAGCCACCAAACCCAGACACTAGTGCATATGCCAGCAAGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAATCAGCCACCAAACCCAGACACTAGTGCATATGCCAGCAAGATT  250

seq1  TTGCTGAAGGGACCCTGATACTGTCTTGTATGAGTCTATGCCAGTGCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGAAGGGACCCTGATACTGTCTTGTATGAGTCTATGCCAGTGCCTG  300

seq1  GCAAATACAGAAGTGGATGCTCACAATCATCTATAGGATGGAACACAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATACAGAAGTGGATGCTCACAATCATCTATAGGATGGAACACAGGG  350

seq1  CCCCCAATGGAGAAGCTAGAGAAAGCACTCAAGGAGCTGAAGAGGTCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAATGGAGAAGCTAGAGAAAGCACTCAAGGAGCTGAAGAGGTCTGC  400

seq1  AACCCTATAGGTGGAACAACAATATGAACTAACCAGTACTCCCAGAGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTATAGGTGGAACAACAATATGAACTAACCAGTACTCCCAGAGTTC  450

seq1  GTGTCTCTAGCTGCATATGTAGCAGAAGATGGCCTAGTCGGCCTTCATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCTAGCTGCATATGTAGCAGAAGATGGCCTAGTCGGCCTTCATTG  500

seq1  GGAAAAGAGTCCCTTTG  517
      |||||||||||||||||
seq2  GGAAAAGAGTCCCTTTG  517