BAC Information

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BAC

Clone NameB6Ng01-081D08
Chromosome2 (Build37)
Map Location 95,627,865 - 95,765,413
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042843
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081D08.bB6Ng01-081D08.g
ACCDH896128DH896129
length1,006509
definitionDH896128|Mus musculus domesticus DNA, BAC clone: B6Ng01-081D08, 5' end.DH896129|Mus musculus domesticus DNA, BAC clone: B6Ng01-081D08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,627,865 - 95,628,831)(95,764,900 - 95,765,413)
sequence
gaattcaatatcattaataattcagtattaaggaaattatcattattttc
tattctgttagaagagccaacaaactattcatcactttgataatttttct
ttttgttcatatttgcattgtttttctaataccaaaggaaattaaacact
atatgttagaagttataaaatgctgaataggttcttcactacaggacttg
ccattactttttgaaaatagtaatatattctgtgtttctttgagagaaaa
catgtatgtattacatgtaattgttccaaaatttgtttttatctacagaa
cccatctctggagatgtggctttggcatcagtacgcatgcacatgtgagc
atacagaataaatcagtcagtcaatcaaccaaccaatcaattaaataaaa
agtaagtttctccacagttgtggtgatgatgagactttgctattctattg
agagatttttttttaaattttttattgtttattttatttatttgcatttc
aaatgttatcccccttcccagtttctcctccacaagcaccctatcccttc
ctccctctcccctgcctttcccacccacccacccacttctgcctcagtgc
cctagttttcccctatcctgagtcattaggcctccacaggaccaaggggc
tcccctcccagtgatgccagataaggcaatcctctgctgtgggcctgggt
accagaagttttccacggaaatttctgtccagggttggagggttccagcg
aagggaagccaatgcaagcaggaattctctgtcatgccttccaggtcact
cagtaaagagctgctctgaacggctgaaaagccaataatccagtgaggaa
tgcagtgggacctctggtgtctctttgggacagatctgttcccaagtgtt
acatacagctcttggaacaaaagactcagacgaaggagtagttcttgtgc
acttttaattccctggatggattatatacagttctgggggtgattcagat
tcgtca
aagattgttgaactccatagaaccaaataactctattaaaaatgaggtac
agagctacacaaaaattctcaaatgaagactattgaatggctgagaagca
gtaatatggtcctaatgcctcaagactatctaggttttaaaataataatt
ccttccatatgcttattttgtgagaatatagtaatctatttgtacctacc
aacaatagcaaacacctttgtcttcttacaactttaatttccttttataa
tctttctttccatgtagcttattttacatgaatgtaggaactccaaagtg
atgtacatttctaaggtcctacttttagcatctaagactttatatttgat
tatttcaccatcgttaacattatatgtgattatgctgataactcagatga
cctaaccatgcacagaaagcatgagtagttttttttgtacctgctgcttt
tatattttattttagtatatatataactaaatattcatatttagttgtgg
gtaatattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_95627865_95628831
seq2: B6Ng01-081D08.b_46_1012

seq1  GAATTCAATATCATTAATAATTCAGTATTAAGGAAATTATCATTATTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATCATTAATAATTCAGTATTAAGGAAATTATCATTATTTTC  50

seq1  TATTCTGTTAGAAGAGCCAACAAACTATTCATCACTTTGATAATTTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGTTAGAAGAGCCAACAAACTATTCATCACTTTGATAATTTTTCT  100

seq1  TTTTGTTCATATTTGCATTGTTTTTCTAATACCAAAGGAAATTAAACACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTCATATTTGCATTGTTTTTCTAATACCAAAGGAAATTAAACACT  150

seq1  ATATGTTAGAAGTTATAAAATGCTGAATAGGTTCTTCACTACAGGACTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTTAGAAGTTATAAAATGCTGAATAGGTTCTTCACTACAGGACTTG  200

seq1  CCATTACTTTTTGAAAATAGTAATATATTCTGTGTTTCTTTGAGAGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTACTTTTTGAAAATAGTAATATATTCTGTGTTTCTTTGAGAGAAAA  250

seq1  CATGTATGTATTACATGTAATTGTTCCAAAATTTGTTTTTATCTACAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATGTATTACATGTAATTGTTCCAAAATTTGTTTTTATCTACAGAA  300

seq1  CCCATCTCTGGAGATGTGGCTTTGGCATCAGTACGCATGCACATGTGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCTCTGGAGATGTGGCTTTGGCATCAGTACGCATGCACATGTGAGC  350

seq1  ATACAGAATAAATCAGTCAGTCAATCAACCAACCAATCAATTAAATAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAATAAATCAGTCAGTCAATCAACCAACCAATCAATTAAATAAAA  400

seq1  AGTAAGTTTCTCCACAGTTGTGGTGATGATGAGACTTTGCTATTCTATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGTTTCTCCACAGTTGTGGTGATGATGAGACTTTGCTATTCTATTG  450

seq1  AGAGATTTTTTTTTAAATTTTTTATTGTTTATTTTATTTATTTGCATTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTTTTTTTTAAATTTTTTATTGTTTATTTTATTTATTTGCATTTC  500

seq1  AAATGTTATCCCCCTTCCCAGTTTCTCCTCCACAAGCACCCTATCCCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTATCCCCCTTCCCAGTTTCTCCTCCACAAGCACCCTATCCCTTC  550

seq1  CTCCCTCTCCCCTGCCTTTCCCACCCACCCACCCACTTCTGCCTCAGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCTCCCCTGCCTTTCCCACCCACCCACCCACTTCTGCCTCAGTGC  600

seq1  CCTAGTTTTCCCCTATCCTGAGTCATTAGGCCTCCACAGGACCAAGGGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTTTTCCCCTATCCTGAGTCATTAGGCCTCCACAGGACCAAGGGGC  650

seq1  TCCCCTCCCAGTGATGCCAGATAAGGCAATCCTCTGCTGTGGGCCTGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTCCCAGTGATGCCAGATAAGGCAATCCTCTGCTGTGGGCCTGGGT  700

seq1  ACCAGAAGTTTTCCACGGAAATTTCTGTCCAGGGTTGGAGGGTTCCAGCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAAGTTTTCCACGGAAATTTCTGTCCAGGGTTGGAGGGTTCCAGCG  750

seq1  AAGGGAAGCCAATGCAAGCAGGAATTCTCTGTCATGCCTTCCAGGTCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAGCCAATGCAAGCAGGAATTCTCTGTCATGCCTTCCAGGTCACT  800

seq1  CAGTAAAGAGCTGCTCTGAACGGCTGAAAAGCCAATAATCCAGTGAGGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAAGAGCTGCTCTGAACGGCTGAAAAGCCAATAATCCAGTGAGGAA  850

seq1  TGCAGTGGGACCTCTGGTGTCTCTTTGGGACAGATCTGTTCCCAAGTGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTGGGACCTCTGGTGTCTCTTTGGGACAGATCTGTTCCCAAGTGTT  900

seq1  ACATACAGCTCTTGGAACAAAAGACTCAGACGAAGGAGTAGTTCTTGTGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACAGCTCTTGGAACAAAAGACTCAGACGAAGGAGTAGTTCTTGTGC  950

seq1  ACTTTTAATTCCCTGGA  967
      |||||||||||||||||
seq2  ACTTTTAATTCCCTGGA  967

seq1: chr2_95764900_95765413
seq2: B6Ng01-081D08.g_70_584 (reverse)

seq1  CAATATTACCCACAACTAAATATGAATATTTAGTTATATATATACTAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTACCCACAACTAAATATGAATATTTAGTTATATATATACTAAAA  50

seq1  TAAAATATAAAAGCAGCAGGTACAAAAAAAACTACTCATGCTTTCTGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATAAAAGCAGCAGGTACAAAAAAAACTACTCATGCTTTCTGTGC  100

seq1  ATGGTTAGGTCATCTGAGTTATCAGCATAATCACATATAATGTTAACGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTAGGTCATCTGAGTTATCAGCATAATCACATATAATGTTAACGAT  150

seq1  GGTGAAATAATCAAATATAAAGTCTTAGATGCTAAAAGTAGGACCTTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAATAATCAAATATAAAGTCTTAGATGCTAAAAGTAGGACCTTAGA  200

seq1  AATGTACATCACTTTGGAGTTCCTACATTCATGTAAAATAAGCTACATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTACATCACTTTGGAGTTCCTACATTCATGTAAAATAAGCTACATGG  250

seq1  AAAGAAAGATTATAAAAGGAAATTAAAGTTGTAAGAAGACAAAGGTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGATTATAAAAGGAAATTAAAGTTGTAAGAAGACAAAGGTGTTT  300

seq1  GCTATTGTTGGTAGGTACAAATAGATTACTATATTCTCACAAAATAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTGTTGGTAGGTACAAATAGATTACTATATTCTCACAAAATAAGCA  350

seq1  TATGGAAGGAATTATTATTTTAAAACCTAGATAGTCTTGAGGCATTAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAGGAATTATTATTTTAAAACCTAGATAGTCTTGAGGCATTAGGA  400

seq1  CCATATTACTGCTTCTCAGCCATTCAATAGTCTTCATTTGAGAATTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTACTGCTTCTCAGCCATTCAATAGTCTTCATTTGAGAATTTTTG  450

seq1  TGTAGCTCTGTACCTCATTTTTAATAGAGTTATTTGGTTCTATGGAGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTCTGTACCTCATTTTTAATAGAGTTATTTGGTTCTATGGAGTTC  500

seq1  AAC-TTCTTGAATTC  514
      |||  ||||||||||
seq2  AACAATCTTGAATTC  515