BAC Information

Click to search

BAC

Clone NameB6Ng01-081D19
Chromosome2 (Build37)
Map Location 112,479,213 - 112,479,988
singlet/doubletsinglet
Overlap geneRyr3
Upstream geneOlfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5, Aven
Downstream gene4930563P21Rik, Fmn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081D19.bB6Ng01-081D19.g
ACCDH896148DH896149
length7761,100
definitionDH896148|Mus musculus domesticus DNA, BAC clone: B6Ng01-081D19, 5' end.DH896149|Mus musculus domesticus DNA, BAC clone: B6Ng01-081D19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtagcatgaatgaggagtctaagggacctgcttatatggccca
ttccagcagggactagatactgggctggagggaagatgaacgtgcagata
ttttgccttcaagaaactgtaaaagagggagtgggcacatatgctaaggg
aagcaccaaagtagatgcattgctggcttcctgggggatgaagttactca
gatcttgggggacagagctcataagaggtgctttagacaggagggagaac
tggagctttatacggaagaaaagcaaaaggcttgtaggatctacctatgc
ttagccacatacctatcaactctgtgatcttagggcaacacagcctctca
gtttgcactctctgagattaacatctagcttacaagacagttgtgactca
gtacctgaggtgtggcaaaagcttggcacattttaactttcttgtattcc
tgtcccatacagaggtttagaagtatgatgaactatgtcctatacacact
tagtgaggaagaaaacgctgagcagtttggatttgcaaatatggagactc
cattagaggtttttaatgtctatactcattactgtatacagtcttctgca
tatggcccaagtcaattctttgtttagccatgtagatgtgcacattatgt
aggtatccatattgtgtgtaaatgtatataaaaagtatacctattaactt
attattaggaacacgtgtcagaagtgcctgagacatgtgtgtgtgtgtgt
gtgtgtgtgtgtgtttatatttgtct
gaattcaaacaagcaaacaaacaaaaaacctatggtaagtccaggaaacg
gaatattactcagtgctaaaaagaactattaagccacaaaaatgaatgga
gaacttaaatgagtgttactaagttggagaaagccctttgaaaaggcttc
cattatcagatctagatataagacatttggagaggcaaaagcctttgaga
tagtgaagtgattagtaatttccagaagctatgggaaaggatagctacac
tgggactcagagaagtttggggacaacggaaaatatgctatattatctgt
gacggtacagctatgccattattcattattcactatccatcacagagaat
gagcccccatttaaattttagactttgctgcagatgatgtgtccctgtag
gctttcctgttgtagccaatgaagtgccctcctgggggacattggcagtg
gacggtggatgagacacaggagtgggcatagaaggggctacggggactct
ctgccttcctctcaatctttttgtgactctaaaactgaatcaaataaact
ttaaaatgggtaaggaacagcctaacacatttcaaatataaaggctgagt
aaaggtaacctacattctctttgtaaccttctaacgcccagaggcttcac
tgcaaagtaccatttgcccaacatgagaggtatagggttagaagttaaca
cagactcagggctcaaaatgggctttctttccaatatattgtgctggctg
gtcttatatcaatttgacaaaatctagagttgtctgaaaggaaggaagct
caattgagaaaatgcttcaggaagatccaactgtagggcattttttaaaa
tagtgattgatgggagggcccagggcactgtgggtggtgccatccttggt
gatgggtggtctggttctttaaaaaagcagactaagcaagcccatggaaa
caagcagtaatcagcaccctcattacctctgcatcagcttctgcttcagc
ctctgcttcaggtctgcttgcttgagtcctgttcctgacttcatttcagt
ataacagcaatgtgaaaggataccaaaaaaaccctttcttcccgaaatct

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_112479213_112479988
seq2: B6Ng01-081D19.b_43_818

seq1  GAATTCAGTAGCATGAATGAGGAGTCTAAGGGACCTGCTTATATGGCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAGCATGAATGAGGAGTCTAAGGGACCTGCTTATATGGCCCA  50

seq1  TTCCAGCAGGGACTAGATACTGGGCTGGAGGGAAGATGAACGTGCAGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGCAGGGACTAGATACTGGGCTGGAGGGAAGATGAACGTGCAGATA  100

seq1  TTTTGCCTTCAAGAAACTGTAAAAGAGGGAGTGGGCACATATGCTAAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCCTTCAAGAAACTGTAAAAGAGGGAGTGGGCACATATGCTAAGGG  150

seq1  AAGCACCAAAGTAGATGCATTGCTGGCTTCCTGGGGGATGAAGTTACTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACCAAAGTAGATGCATTGCTGGCTTCCTGGGGGATGAAGTTACTCA  200

seq1  GATCTTGGGGGACAGAGCTCATAAGAGGTGCTTTAGACAGGAGGGAGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTGGGGGACAGAGCTCATAAGAGGTGCTTTAGACAGGAGGGAGAAC  250

seq1  TGGAGCTTTATACGGAAGAAAAGCAAAAGGCTTGTAGGATCTACCTATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTTTATACGGAAGAAAAGCAAAAGGCTTGTAGGATCTACCTATGC  300

seq1  TTAGCCACATACCTATCAACTCTGTGATCTTAGGGCAACACAGCCTCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCACATACCTATCAACTCTGTGATCTTAGGGCAACACAGCCTCTCA  350

seq1  GTTTGCACTCTCTGAGATTAACATCTAGCTTACAAGACAGTTGTGACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCACTCTCTGAGATTAACATCTAGCTTACAAGACAGTTGTGACTCA  400

seq1  GTACCTGAGGTGTGGCAAAAGCTTGGCACATTTTAACTTTCTTGTATTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTGAGGTGTGGCAAAAGCTTGGCACATTTTAACTTTCTTGTATTCC  450

seq1  TGTCCCATACAGAGGTTTAGAAGTATGATGAACTATGTCCTATACACACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCATACAGAGGTTTAGAAGTATGATGAACTATGTCCTATACACACT  500

seq1  TAGTGAGGAAGAAAACGCTGAGCAGTTTGGATTTGCAAATATGGAGACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAGGAAGAAAACGCTGAGCAGTTTGGATTTGCAAATATGGAGACTC  550

seq1  CATTAGAGGTTTTTAATGTCTATACTCATTACTGTATACAGTCTTCTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGAGGTTTTTAATGTCTATACTCATTACTGTATACAGTCTTCTGCA  600

seq1  TATGGCCCAAGTCAATTCTTTGTTTAGCCATGTAGATGTGCACATTATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCCCAAGTCAATTCTTTGTTTAGCCATGTAGATGTGCACATTATGT  650

seq1  AGGTATCCATATTGTGTGTAAATGTATATAAAAAGTATACCTATTAACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATCCATATTGTGTGTAAATGTATATAAAAAGTATACCTATTAACTT  700

seq1  ATTATTAGGAACACGTGTCAGAAGTGCCTGAGACATGTGTGTGTGTGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAGGAACACGTGTCAGAAGTGCCTGAGACATGTGTGTGTGTGTGT  750

seq1  GTGTGTGTGTGTGTTTATATTTGTAT  776
      |||||||||||||||||||||||| |
seq2  GTGTGTGTGTGTGTTTATATTTGTCT  776