BAC Information

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BAC

Clone NameB6Ng01-081L14
Chromosome2 (Build37)
Map Location 140,260,640 - 140,261,820
singlet/doubletsinglet
Overlap genenone
Upstream geneC130053K05Rik, LOC100043792, 5430433G21Rik, Tasp1, LOC672103, LOC269365, Esf1, 2310003L22Rik, Sel1l2, 2900006F19Rik
Downstream geneFlrt3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081L14.bB6Ng01-081L14.g
ACCDH896487DH896488
length1,2631,153
definitionDH896487|Mus musculus domesticus DNA, BAC clone: B6Ng01-081L14, 5' end.DH896488|Mus musculus domesticus DNA, BAC clone: B6Ng01-081L14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttctatgtgataactgccggttgtaccagcaccatttgttgaaa
atgctgtctttcttccactggatggttttagctcccttgtcaaagattaa
gtaagcataggtgtgtaggttcatttctgagttttcaattctattccatt
gatctacctgtctgttgatgtatcagtaccatgcagcttttatcacaatt
gctctgtagtacagcttgaaatcaggcatggtgattccaccagaggttct
tttattgttgagaatagtttttgctatcctagttttttttgttattccag
atgaatttgcaaattgccctttctaactcagtgaagaattgatttggaat
tttgatggggattgcattgaatctgtggattgttttcggcaggctagcca
ttttgattatattaatcctgccaatccatgagcatgggagatctttccat
cttctgagatcttcttcaatttctttcttcagagacttgaagttcttgtc
atatagatctttcactttcttagagtcacaccaaggtattttatattatt
tgtgactattgtgaagggtgttgtttccctaatttctttttcttttttct
caagacatggtttctctgtatagccttggctgtcttggaactcactctgt
agaccaggctggccttgaactcagaaatccacctgcctctgcctcccaag
ttctgggattaaaggcatgagccaccacccagccctaatttctttcttat
cctgtttatccttagtgtagagaaaggccactgatttgtttgaactaatt
ttatatccagctactgcactgaagctgtttatcacgtttaggagttctct
ggtggaatttttagggttacttatatatactatcatatcatctgcaaata
gttatattttggcttcttccttttaatttgtatctccttgatctcctttt
gttgtcgaattgctctggctaggacttcaagtactatattgaataggtag
ggagaaattgggcagccttgtctagtgctgatttagtgggatgcttccag
ctttctccattacttgatggtaggtactaggttgctgtatttgctttatt
attggtaggatgggctgaaatctggattcagactttaatgagggtgtttg
gatagtgtgtccaatgctccagcctcatgaaggtacatgcttgccttgga
ctgtttgagctgaattggttagaattcgaaattaaaacacttggcatccc
tgggacgatggct
gaattctccacaccatgtgttatacagactatccttgctttagaaatgat
tcttaacttatagaggagaacttccaggctaaattctccataactcactt
cttccagatacatagcacaattactggcacatggtgaatattcatttact
gaaagaagtcaggaaaattggatgaagcatggggggggggaataacaaaa
taaacagattaatataaaagaaatgttaaagttaatcatttaaaatattt
tagtgaatagtagagtggtatagcaaattaatgcaagttcctatatagaa
atagcaacagtatatatatggtgttttaatttcctgcttcacaactcact
gaatttaaagcttctatctattgttctgtaatatttaagatagttttgcc
aactgtattccagagaaccagagaaaaagcccttctaggagggctcaagg
catttagatgattatactaaaaaggaccagtcttctacattacatttcaa
gtcactgacataattttaactgtttctagaattccaatgatagaacttgt
tcattcataaagcataaaagttgctgtagttggtagcgcctgtccataat
ctcacaattcagcaggatggctacaagtttactgccagcaggctccacat
agggagagccaggcaagccaaaccagggttgtataataagacctcatctc
aaacaaaaaggcccatacaaagttaaaactattaacttactgactcatag
gtatctccttgaacctccctacaaacaaggaaagaatagctgggctcaag
atgctggtgatgctggactgcacaaccatacttagatatcagtgttaatg
gagaaatcaaattagaggtaataagtacatcttgaagcactaggatattt
taagatccacctttagatatttcggagatataaaagttcatagggtatct
ggacatttatcttctagatctctaggccaatgtgctccctgcttttcttc
atgatttgtgtgtgagcaacatcagactttcgaaactatacacaaaatca
tagcatctctaacaccaccagtactgaaaaataacatgtactttttcgat
ttcatcttgtttataaccttttagtgtttgaccctgcttatttttataca
att
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_140260640_140261820
seq2: B6Ng01-081L14.g_70_1222 (reverse)

seq1  AATTGTATATAAATATAAGCAGTGGTTTCAAAACAACTATACAGGTTTAT  50
      |||||  |||||| |||||||| |   |||||   |||| | ||| ||||
seq2  AATTG--TATAAAAATAAGCAGGG---TCAAA--CACTA-AAAGG-TTAT  41

seq1  AAAACAAGATGAAATACCGAAAAAGTACATTGTTAATTTTTTCAGTACTT  100
       ||||||||||||||  |||||||||||| |||||  ||||||||||| |
seq2  -AAACAAGATGAAAT--CGAAAAAGTACA-TGTTA--TTTTTCAGTAC-T  84

seq1  GGTGGTGATTTAGAGATGCTTATGATTTTGTGTATAGTTTCTGAAAGTCT  150
      |||||||  |||||||||| ||||||||||||||||||||| ||||||||
seq2  GGTGGTG--TTAGAGATGC-TATGATTTTGTGTATAGTTTC-GAAAGTCT  130

seq1  GATGTTGCTCACACACAAATCATTGAAGGAAAAGGCAGGGAGCACATTGG  200
      |||||||||||||||||||||| |||||  ||| ||||||||||||||||
seq2  GATGTTGCTCACACACAAATCA-TGAAG--AAAAGCAGGGAGCACATTGG  177

seq1  CCTAGAGATCTAGGAAGATAAATGTCCAGATACCCTATGAAACTTTTATA  250
      |||||||||||| |||||||||||||||||||||||||| ||||||||||
seq2  CCTAGAGATCTA-GAAGATAAATGTCCAGATACCCTATG-AACTTTTATA  225

seq1  TCTCCGAAATATTCTAAAGGTTGGATCTTAAAATATTCCTAGTGCTTCAA  300
      ||||||||||| |||||||| |||||||||||||| ||||||||||||||
seq2  TCTCCGAAATA-TCTAAAGG-TGGATCTTAAAATA-TCCTAGTGCTTCAA  272

seq1  GATGTACTTATTACCTCTAATTTGATTTCTCCATTAACACTGATATCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTACTTATTACCTCTAATTTGATTTCTCCATTAACACTGATATCTAA  322

seq1  GTATGGTTGTGCAGTCCAGCATCACCAGCATCTTGAGCCCAGCTATTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGTTGTGCAGTCCAGCATCACCAGCATCTTGAGCCCAGCTATTCTT  372

seq1  TCCTTGTTTGTAGGGAGGTTCAAGGAGATACCTATGAGTCAGTAAGTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTTTGTAGGGAGGTTCAAGGAGATACCTATGAGTCAGTAAGTTAA  422

seq1  TAGTTTTAACTTTGTATGGGCCTTTTTGTTTGAGATGAGGTCTTATTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTAACTTTGTATGGGCCTTTTTGTTTGAGATGAGGTCTTATTATA  472

seq1  CAACCCTGGTTTGGCTTGCCTGGCTCTCCCTATGTGGAGCCTGCTGGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCTGGTTTGGCTTGCCTGGCTCTCCCTATGTGGAGCCTGCTGGCAG  522

seq1  TAAACTTGTAGCCATCCTGCTGAATTGTGAGATTATGGACAGGCGCTACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTGTAGCCATCCTGCTGAATTGTGAGATTATGGACAGGCGCTACC  572

seq1  AACTACAGCAACTTTTATGCTTTATGAATGAACAAGTTCTATCATTGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACAGCAACTTTTATGCTTTATGAATGAACAAGTTCTATCATTGGAA  622

seq1  TTCTAGAAACAGTTAAAATTATGTCAGTGACTTGAAATGTAATGTAGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAAACAGTTAAAATTATGTCAGTGACTTGAAATGTAATGTAGAAG  672

seq1  ACTGGTCCTTTTTAGTATAATCATCTAAATGCCTTGAGCCCTCCTAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTCCTTTTTAGTATAATCATCTAAATGCCTTGAGCCCTCCTAGAAG  722

seq1  GGCTTTTTCTCTGGTTCTCTGGAATACAGTTGGCAAAACTATCTTAAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTTTCTCTGGTTCTCTGGAATACAGTTGGCAAAACTATCTTAAATA  772

seq1  TTACAGAACAATAGATAGAAGCTTTAAATTCAGTGAGTTGTGAAGCAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAACAATAGATAGAAGCTTTAAATTCAGTGAGTTGTGAAGCAGGA  822

seq1  AATTAAAACACCATATATATACTGTTGCTATTTCTATATAGGAACTTGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAACACCATATATATACTGTTGCTATTTCTATATAGGAACTTGCA  872

seq1  TTAATTTGCTATACCACTCTACTATTCACTAAAATATTTTAAATGATTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTGCTATACCACTCTACTATTCACTAAAATATTTTAAATGATTAA  922

seq1  CTTTAACATTTCTTTTATATTAATCTGTTTATTTTGTTATTCCCCCCCCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAACATTTCTTTTATATTAATCTGTTTATTTTGTTATTCCCCCCCCC  972

seq1  CATGCTTCATCCAATTTTCCTGACTTCTTTCAGTAAATGAATATTCACCA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTCATCCAATTTTCCTGACTTCTTTCAGTAAATGAATATTCACCA  1022

seq1  TGTGCCAGTAATTGTGCTATGTATCTGGAAGAAGTGAGTTATGGAGAATT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCAGTAATTGTGCTATGTATCTGGAAGAAGTGAGTTATGGAGAATT  1072

seq1  TAGCCTGGAAGTTCTCCTCTATAAGTTAAGAATCATTTCTAAAGCAAGGA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTGGAAGTTCTCCTCTATAAGTTAAGAATCATTTCTAAAGCAAGGA  1122

seq1  TAGTCTGTATAACACATGGTGTGGAGAATTC  1181
      |||||||||||||||||||||||||||||||
seq2  TAGTCTGTATAACACATGGTGTGGAGAATTC  1153