BAC Information

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BAC

Clone NameB6Ng01-082G18
Chromosome2 (Build37)
Map Location 51,855,578 - 51,856,521
singlet/doubletsinglet
Overlap genenone
Upstream geneRnd3, LOC666802, LOC666810, LOC100041614, Tas2r134, LOC433426, Ppia-ps2_635.1, Rbm43, LOC100041634, Nmi
Downstream geneTnfaip6, Rif1, Neb, LOC100041670, Arl5a, Cacnb4, OTTMUSG00000012638, Stam2, Fmnl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082G18.bB6Ng01-082G18.g
ACCDH896979DH896980
length1,209938
definitionDH896979|Mus musculus domesticus DNA, BAC clone: B6Ng01-082G18, 5' end.DH896980|Mus musculus domesticus DNA, BAC clone: B6Ng01-082G18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccatttttaatggggttatttgattt
tctggagcccacctccttgagttctttatatgctttgtgtcccataggtt
tgggtatgttatggcttcattttcattactctaaaaagtctttctttatt
ccttccttgaccaaggtatcattgagaagagtattgtttagtttccacgt
gaatgttggctactatttattttgttattgaagatcagccttagtccatg
gtgatctgatagatacatgggacaatttcaatatttttgtatgtgttgag
gcttgttttgtgaccaattatgtggtcaattttggagaaggtaccgtgag
gtgctgagaagaaggtatatccttttgttttaggataaaatgttctgtag
atatccgtcagatccatttgtttcataacttctgttagtttcactgtgtc
cctgtttagtttctgtttccatgatctagtccattggtgaaagtggtgtg
ttgaagtctcccactattattgtgtgaggtgcaatgtgtgctttgagctt
tactaaagtttcattaatgaatgtggctgcccttgtatttggagcataga
tattcagaattgatagttcatcttggaggtttttacctttgatgagtatg
aagtgcccctccttgtcttttttgatgactttgggttggaagtcaatttt
attagatattaggatggccactccagcttgtttcgtcataccatgtgctt
ggaaaattgttttccagcctttcattctgaggtaatgtctttttctctga
gtttcctgtaagcaggtaaatgttgggtcctgtttgtgtagccagtctgt
tagtgtatgtctttttattggggagttgagcccattgatattaagagata
ttaagaaaggtaattgttgcttcctgttattctgttaaagttggcgtttg
ttcttgtggctgtcttttacgtttgttgagggattaccttcttgcttttt
tctaggatgtggtttcaggcctggtataattagtttttttcctgtaattt
tccttgaaggctggattcttgggaagaaaatggataaattgttttgtctg
aaacccttcggttcccatcttggtattgagatggcttggtatagacccgc
acgaattggttctctagtcaatcctcctgcttctagaccatgtttaaaac
cggtgatcc
gaattcttttcagtcgattttaaataagacatactggtcctcccatcttc
ttcctcctatataggagcctagacatggttgggagacgtgaggaggaggc
tgagtcactgagagaagcttttaaaactgtgatgtgcagaatcgctcctt
atagggctcttcctgtgctggcccagcggggaacacctcatagcatagcc
gggattagccttactcacagggtgttttgttagcgctctgggaaagaact
agaagacaaggttaataaaagtgtgagaactctaataataatttttacct
cagaagaaaaattgtgacagattcgcatgacatcatgtctggttaaaata
taggaataggaaaagggagacagattttcacaaataaaaacagtaccagt
cacctaccaagtagaataaaatgttttattcctccaccttctcactgata
taaatagaaaagttacgtggccacagacacctccacagaaagggtggcaa
ttaggatgggctctgttccatacatctcaaatgttgtcttacttcactga
agtataaaatcatttcaaggaataaaattctaaacaattttctttttcct
tcctctttattgtacctcagcttcctcagtataaaacagtttttcctatt
cagaatagtagtttataaggctttctctgtattagcatacaaacataaac
acttaactacggaaaattaatgaaaagcaatcctatttttattctagata
taacttaaagctaatttctgccctcagaaacattccaagcataaggatga
gacaattccagactccaaatccagattctggccatgttgcttcttagggc
tgctcggaccattgctttgctgtctgtttttatttgtttgttttgtttgt
tttcgagacagggtttctcgggagtcctgcctgtcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_51855578_51856521
seq2: B6Ng01-082G18.g_68_1005

seq1  GAATTCTTTTCAGTCGATTTTAAATAAGACATACTGGTCCTCCCATCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCAGTCGATTTTAAATAAGACATACTGGTCCTCCCATCTTC  50

seq1  TTCCTCCTATATAGGAGCCTAGACATGGTTGGGAGACGTGAGGAGGAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCTATATAGGAGCCTAGACATGGTTGGGAGACGTGAGGAGGAGGC  100

seq1  TGAGTCACTGAGAGAAGCTTTTAAAACTGTGATGTGCAGAATCGCTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCACTGAGAGAAGCTTTTAAAACTGTGATGTGCAGAATCGCTCCTT  150

seq1  ATAGGGCTCTTCCTGTGCTGGCCCAGCGGGGAACACCTCATAGCATAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGCTCTTCCTGTGCTGGCCCAGCGGGGAACACCTCATAGCATAGCC  200

seq1  GGGATTAGCCTTACTCACAGGGTGTTTTGTTAGCGCTCTGGGAAAGAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTAGCCTTACTCACAGGGTGTTTTGTTAGCGCTCTGGGAAAGAACT  250

seq1  AGAAGACAAGGTTAATAAAAGTGTGAGAACTCTAATAATAATTTTTACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACAAGGTTAATAAAAGTGTGAGAACTCTAATAATAATTTTTACCT  300

seq1  CAGAAGAAAAATTGTGACAGATTCGCATGACATCATGTCTGGTTAAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAAAAATTGTGACAGATTCGCATGACATCATGTCTGGTTAAAATA  350

seq1  TAGGAATAGGAAAAGGGAGACAGATTTTCACAAATAAAAACAGTACCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAATAGGAAAAGGGAGACAGATTTTCACAAATAAAAACAGTACCAGT  400

seq1  CACCTACCAAGTAGAATAAAATGTTTTATTCCTCCACCTTCTCACTGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTACCAAGTAGAATAAAATGTTTTATTCCTCCACCTTCTCACTGATA  450

seq1  TAAATAGAAAAGTTACGTGGCCACAGACACCTCCACAGAAAGGGTGGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGAAAAGTTACGTGGCCACAGACACCTCCACAGAAAGGGTGGCAA  500

seq1  TTAGGATGGGCTCTGTTCCATACATCTCAAATGTTGTCTTACTTCACTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGATGGGCTCTGTTCCATACATCTCAAATGTTGTCTTACTTCACTGA  550

seq1  AGTATAAAATCATTTCAAGGAATAAAATTCTAAACAATTTTCTTTTTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAAAATCATTTCAAGGAATAAAATTCTAAACAATTTTCTTTTTCCT  600

seq1  TCCTCTTTATTGTACCTCAGCTTCCTCAGTATAAAACAGTTTTTCCTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTTATTGTACCTCAGCTTCCTCAGTATAAAACAGTTTTTCCTATT  650

seq1  CAGAATAGTAGTTTATAAGGCTTTCTCTGTATTAGCATACAAACATAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATAGTAGTTTATAAGGCTTTCTCTGTATTAGCATACAAACATAAAC  700

seq1  ACTTAACTACGGAAAATTAATGAAAAGCAATCCTATTTTTATTCTAGATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAACTACGGAAAATTAATGAAAAGCAATCCTATTTTTATTCTAGATA  750

seq1  TAACTTAAAGCTAATTTCTGCCCTCAGAAACATTCCAAGCATAAGGATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTAAAGCTAATTTCTGCCCTCAGAAACATTCCAAGCATAAGGATGA  800

seq1  GACAATTCCAGACTCCAAATCCAGATTTCTGGCCATGTTGCTTCTTAGGG  850
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GACAATTCCAGACTCCAAATCCAGA-TTCTGGCCATGTTGCTTCTTAGGG  849

seq1  CTGCTCGGACCATTGCTTTGCTGTCTGTTTTTTATTTGTTTGTTTTGTTT  900
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTGCTCGGACCATTGCTTTGCTGTCTG-TTTTTATTTGTTTGTTTTGTTT  898

seq1  TGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGCCTGTCCTG  944
         ||||||||||||||||||||   | || |||||||||||||
seq2  --GTTTTCGAGACAGGGTTTCTC--GGGAGTCCTGCCTGTCCTG  938