BAC Information

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BAC

Clone NameB6Ng01-082O03
Chromosome2 (Build37)
Map Location 83,529,376 - 83,529,907
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC433440, Fsip2, LOC545429, Ppia-ps2_981.1, LOC100040818, LOC668077, Zc3h15
Downstream geneItgav, Dnmt3l-ps1, D430039N05Rik, Zswim2, LOC668096, LOC668100, LOC545432, LOC668107, LOC668113, LOC668115, LOC668119, LOC383725, Calcrl, Tfpi, LOC672763, Ctnnd1, 2700094K13Rik, Txndc14, Med19, Zdhhc5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082O03.bB6Ng01-082O03.g
ACCDH897305DH897306
length9951,151
definitionDH897305|Mus musculus domesticus DNA, BAC clone: B6Ng01-082O03, 5' end.DH897306|Mus musculus domesticus DNA, BAC clone: B6Ng01-082O03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatctttgtaagtggctttaatcttggagagaaaagtagatgtt
aatgagtttggaagtgtttctacttgtgtatgaaattgttcttcgacaag
agtggtggtttcaatttgcttggtccagagagtgacactattgttggagt
aggtgtgactgtgctggaggaagtatgtcaccatgggagtgagctttgag
agaacttcctcctagctgtctgaggatgtcagtcttctcctgactgcctt
cagatcaagatgtagaactcttggttcctctaccactttgtctgtctgct
tcttgccctgatgataatgaactgaacctgtaaaccagccccaattaaat
gttgcctcggtttataagagtgccttggctatggtgtttcttctcagcaa
tggaaaccctaactaagacagcaggtgattggttgatgtcaacaaaaaca
ctaagtgatgaattttcttgtgttgtcaataccaaagaagatgaactgga
actatgaatggctgaagaactagagcaagttaaaaattatgcttgaatct
tggtcccagttgatggagctgtttgggaaggattcggagatatggcctta
ttagatgaggtatgtcacaggggtggaacagttccagctcttgctttagt
taagtttagtgctatgataagatatcatgaacaaggcaacttgtaaaagg
gtttacttggggattacaatttcagagggtgtggtggtttgaatacggtt
ggcccaagggagtggcactattagaagatgtggtcttgttggaggaactg
tgtcactgtgggtgtgggctttaagactctcctcctagctgactagaagc
tagtattctgctagcagccttcagatgaagatgtagaaccctcagctcct
cctgaaccatgcctgcctggatgctgccatgctcctaccttgatgataat
ggattgaacttctgaacctgtaagccagccccaattatactgtcc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaaccaa
atggatggacatggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaaacaaagtatggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcttccaaatgctgacaccattgcatacactagcaagattttactgaa
aggacccagatgtagctgtcttcttgtgagactatgccggggcctagcaa
acacagagtggatgctcacagtcagctaatggatggatcacagggcttct
atggagagctagagaagtacccaaggagctaaagggatctcaccctatag
gtgacaacattatgatctacagtaccctgagcctcttgactctctaagct
gcatattgtatcaagatgctagtcgcatcactgaaagagtcaatggaacg
cgactttgttgcccgtcagggacgccaggccaaaggggggaagtggtggc
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_83529376_83529907
seq2: B6Ng01-082O03.b_44_575 (reverse)

seq1  TAACTTGCTCTAGTTCTTCAGCCATTCATAGTTCCAGTTCATCTTCTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTGCTCTAGTTCTTCAGCCATTCATAGTTCCAGTTCATCTTCTTTG  50

seq1  GTATTGACAACACAAGAAAATTCATCACTTAGTGTTTTTGTTGACATCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGACAACACAAGAAAATTCATCACTTAGTGTTTTTGTTGACATCAA  100

seq1  CCAATCACCTGCTGTCTTAGTTAGGGTTTCCATTGCTGAGAAGAAACACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCACCTGCTGTCTTAGTTAGGGTTTCCATTGCTGAGAAGAAACACC  150

seq1  ATAGCCAAGGCACTCTTATAAACCGAGGCAACATTTAATTGGGGCTGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCAAGGCACTCTTATAAACCGAGGCAACATTTAATTGGGGCTGGTT  200

seq1  TACAGGTTCAGTTCATTATCATCAGGGCAAGAAGCAGACAGACAAAGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGTTCAGTTCATTATCATCAGGGCAAGAAGCAGACAGACAAAGTGG  250

seq1  TAGAGGAACCAAGAGTTCTACATCTTGATCTGAAGGCAGTCAGGAGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGAACCAAGAGTTCTACATCTTGATCTGAAGGCAGTCAGGAGAAGA  300

seq1  CTGACATCCTCAGACAGCTAGGAGGAAGTTCTCTCAAAGCTCACTCCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATCCTCAGACAGCTAGGAGGAAGTTCTCTCAAAGCTCACTCCCAT  350

seq1  GGTGACATACTTCCTCCAGCACAGTCACACCTACTCCAACAATAGTGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACATACTTCCTCCAGCACAGTCACACCTACTCCAACAATAGTGTCA  400

seq1  CTCTCTGGACCAAGCAAATTGAAACCACCACTCTTGTCGAAGAACAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGGACCAAGCAAATTGAAACCACCACTCTTGTCGAAGAACAATTT  450

seq1  CATACACAAGTAGAAACACTTCCAAACTCATTAACATCTACTTTTCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACAAGTAGAAACACTTCCAAACTCATTAACATCTACTTTTCTCTC  500

seq1  CAAGATTAAAGCCACTTACAAAGATAGAATTC  532
      ||||||||||||||||||||||||||||||||
seq2  CAAGATTAAAGCCACTTACAAAGATAGAATTC  532