BAC Information

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BAC

Clone NameB6Ng01-083B02
Chromosome2 (Build37)
Map Location 57,248,523 - 57,249,670
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC227920, Nr4a2, LOC100041900, LOC100042910, Gpd2
Downstream geneLOC271788, Galnt5, A330104H05Rik, LOC667026, Pscdbp, LOC100042926, Acvr1c, LOC667062
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083B02.bB6Ng01-083B02.g
ACCDH897434DH897435
length1,1381,163
definitionDH897434|Mus musculus domesticus DNA, BAC clone: B6Ng01-083B02, 5' end.DH897435|Mus musculus domesticus DNA, BAC clone: B6Ng01-083B02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttctaaagcagaagctcccgaagccgctttcaagcctggggtg
gcgatttggcagaggtcttgcttcctggttttcaaatggtgccactctcg
tggaacatatcaggatggcattgagcccggcagttgtcgtaatccaactg
gagcagttgagccccgtgcccaccgcgtgatcatcttgagtcagactgga
gcatgcagtcaacctgaacgaaatgggttcagtcacagagggccagactt
cttaattagttctcaccagcaaggacattttatgtttccaaaagtcaagt
acgaattcttcaagtgacacaattcgggaagacttcataagagggaatta
agcccagtctcccactgtcatcaatagcatctgaagccatactcatttat
ttctcactgttagtgttcttagaaggaccaatgtgctataataaaaaagt
agcagtgaactttagtgaggtgtcattgagcaagagttatcgagtgcagc
ctttcttactaacctttggtaggtgggtagcactcttttgcgcctttatc
cccccttattctctgaagtcctcctttttctatcaagaagcatattaaat
gtataaaccaaccaatactttatattggttttcagtcaacccatttatac
ccacgtgctgtttaaaagtagggagaattctgaaagtcaagaaatgcact
ataaatgcattttttgtttttatttgttttgttaagcttcattcaatgta
gggtaaattatttgtaatttcgagactgtgtttataaatgttaggaacag
aatgtggtgatacaacgtgctgacactttcgaaacgatttgctattgctg
ttaataatgaatgcacgccttctctccaagtcgcaaacacacacctccat
agacagcgaggccagtatttatggggccagttctttctgtcttcaggaat
ccctgtggcagtctttctttccttttaggatgacttggtctcagtctcac
gtaggcacgaagttctacaaatcatttgctgtactcagtgatagtggtgg
gggcagcatcatggtgtcccataaaagaaaacaaataatcaaaggaaatt
taatggcagtagcatagtctagttctttaaggctagaa
gaattctcacctgaggaataccgaagggctgagaagctcctgaaacaatg
ttcaacatccttattcatcagagaaatgtagatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaaaaatgaaaatttcaggtgacag
cagatgctggcaaggatgtggagaaagaggaacactccttcattgctggt
gggattgcaagctgatacaaccactctgaaaatcagtctggtggttcctc
agaaaattggacatagtactaccggaagatccagcaatatcactcctggg
catatacccagaagatgttccaacttgtattgaggatacatgctccactc
tgttcacagcagaacatagccagaagctgtaaagaacccagatacccctc
aacagaggaatggatacagaaaatgtggtccatttacacaatggaatact
actcagctattaaaatcaatgaatttatgaagttcttaggcaaatggatg
tatctgtaaactatcatcctgagtgaagtatctcaatcacaaaagaacac
acttaatatgcattcactaacaagtggatattagaccagaaacttagaat
acccaagacacaacttgtaaaacacatgaaactcacaaagaaggaagacc
aaagtgtggatacttcattccttcttagaatggggaacaaaatacccatt
aaaggagttacagaaacaaagtttggagctgagactgaggaaggaccatc
cagagattgcccaacccagggatccatcccattaacaaccaccaaacgca
gacactattgcatatgccagcaagattttgcagacagaccctgatattgt
tgtttcttgtgaggctatgccagtgcctggcaaatacagaagtggatgct
cacaatcatctattggatgggaacacaggctcccagtgaggactagagaa
agtacccaagagctaaaggagtctgcatctatagagacacatatgaacta
acagtatctccagagcttctgtctctagttgcatatgtagcagagatgtc
tagccagcatcaatgggagggagaggtcctttagtcttatgaagatatat
gctcagtacatggcatggcaagaccaaggaagccagatgttaagctatga
ggagaaatttggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_57248523_57249670
seq2: B6Ng01-083B02.b_45_1182

seq1  GAATTCTTTCTAAAGCAGAAGCTCCCGAAGCCGCTTTCAAGCCTGGGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTAAAGCAGAAGCTCCCGAAGCCGCTTTCAAGCCTGGGGTG  50

seq1  GCGATTTGGCAGAGGTCTTGCTTCCTGGTTTTCAAATGGTGCCACTCTCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGATTTGGCAGAGGTCTTGCTTCCTGGTTTTCAAATGGTGCCACTCTCG  100

seq1  TGGAACATATCAGGATGGCATTGAGCCCGGCAGTTGTCGTAATCCAACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACATATCAGGATGGCATTGAGCCCGGCAGTTGTCGTAATCCAACTG  150

seq1  GAGCAGTTGAGCCCCGTGCCCACCGCGTGATCATCTTGAGTCAGACTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTTGAGCCCCGTGCCCACCGCGTGATCATCTTGAGTCAGACTGGA  200

seq1  GCATGCAGTCAACCTGAACGAAATGGGTTCAGTCACAGAGGGCCAGACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCAGTCAACCTGAACGAAATGGGTTCAGTCACAGAGGGCCAGACTT  250

seq1  CTTAATTAGTTCTCACCAGCAAGGACATTTTATGTTTCCAAAAGTCAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATTAGTTCTCACCAGCAAGGACATTTTATGTTTCCAAAAGTCAAGT  300

seq1  ACGAATTCTTCAAGTGACACAATTCGGGAAGACTTCATAAGAGGGAATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAATTCTTCAAGTGACACAATTCGGGAAGACTTCATAAGAGGGAATTA  350

seq1  AGCCCAGTCTCCCACTGTCATCAATAGCATCTGAAGCCATACTCATTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGTCTCCCACTGTCATCAATAGCATCTGAAGCCATACTCATTTAT  400

seq1  TTCTCACTGTTAGTGTTCTTAGAAGGACCAATGTGCTATAATAAAAAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACTGTTAGTGTTCTTAGAAGGACCAATGTGCTATAATAAAAAAGT  450

seq1  AGCAGTGAACTTTAGTGAGGTGTCATTGAGCAAGAGTTATCGAGTGCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGAACTTTAGTGAGGTGTCATTGAGCAAGAGTTATCGAGTGCAGC  500

seq1  CTTTCTTACTAACCTTTGGTAGGTGGGTAGCACTCTTTTGCGCCTTTATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTACTAACCTTTGGTAGGTGGGTAGCACTCTTTTGCGCCTTTATC  550

seq1  CCCCCTTATTCTCTGAAGTCCTCCTTTTTCTATCAAGAAGCATATTAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTTATTCTCTGAAGTCCTCCTTTTTCTATCAAGAAGCATATTAAAT  600

seq1  GTATAAACCAACCAATACTTTATATTGGTTTTCAGTCAACCCATTTATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAACCAACCAATACTTTATATTGGTTTTCAGTCAACCCATTTATAC  650

seq1  CCACGTGCTGTTTAAAAGTAGGGAGAATTCTGAAAGTCAAGAAATGCACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGTGCTGTTTAAAAGTAGGGAGAATTCTGAAAGTCAAGAAATGCACT  700

seq1  ATAAATGCATTTTTTGTTTTTATTTGTTTTGTTAAGCTTCATTCAATGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGCATTTTTTGTTTTTATTTGTTTTGTTAAGCTTCATTCAATGTA  750

seq1  GGGTAAATTATTTGTAATTTCGAGACTGTGTTTATAAATGTTAGGAACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAATTATTTGTAATTTCGAGACTGTGTTTATAAATGTTAGGAACAG  800

seq1  AATGTGGTGATACAACGTGCTGACACTTTCGAAACGATTTGCTATTGCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGTGATACAACGTGCTGACACTTTCGAAACGATTTGCTATTGCTG  850

seq1  TTAATAATGAATGCACGCCTTCTCTCCAAGTCGCAAACACACACCTCCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAATGAATGCACGCCTTCTCTCCAAGTCGCAAACACACACCTCCAT  900

seq1  AGACAGCGAGGCCAGTATTTATGGGGCCAGTTCTTTCTGTCTTCAGGAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCGAGGCCAGTATTTATGGGGCCAGTTCTTTCTGTCTTCAGGAAT  950

seq1  CCCTGTGGCAGTC-TTCCTTCCTTTTAGGATGACTTGGTCTCAGTCTCAC  999
      ||||||||||||| ||| ||||||||||||||||||||||||||||||||
seq2  CCCTGTGGCAGTCTTTCTTTCCTTTTAGGATGACTTGGTCTCAGTCTCAC  1000

seq1  GTAAGGGCAACGAAGTTCTACAAATCATTTGCTGTACTCAGTTGATAGT-  1048
      |||  ||| |||||||||||||||||||||||||||||||| ||||||| 
seq2  GTA--GGC-ACGAAGTTCTACAAATCATTTGCTGTACTCAG-TGATAGTG  1046

seq1  GTGGGGGCAGCATCAT-GTGTCCCATAAAAAGAAAACAAATAATCAAAGG  1097
      |||||||||||||||| ||||||||| |||||||||||||||||||||||
seq2  GTGGGGGCAGCATCATGGTGTCCCAT-AAAAGAAAACAAATAATCAAAGG  1095

seq1  AAATTTAATGAGCAGTAGCAATTAGTCCTAGGTTCCTTTTAAGGCTTAGA  1147
      |||||||||| |||||||||  |||| ||| ||||  |||||||| ||||
seq2  AAATTTAATG-GCAGTAGCA--TAGT-CTA-GTTC--TTTAAGGC-TAGA  1137

seq1  A  1148
      |
seq2  A  1138