BAC Information

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BAC

Clone NameB6Ng01-083B13
Chromosome2 (Build37)
Map Location 142,776,581 - 142,777,698
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083B13.bB6Ng01-083B13.g
ACCDH897454DH897455
length9561,231
definitionDH897454|Mus musculus domesticus DNA, BAC clone: B6Ng01-083B13, 5' end.DH897455|Mus musculus domesticus DNA, BAC clone: B6Ng01-083B13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccacattattgtgttctttatatatgttggatatagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgactgtgtcttttgccttgcagaaactttggagtttcat
taggtcccatttgtcaattctctttcttacagcacaagccattgctgttc
tgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccact
ttctcctctataagtttcagtatctctggttttatgtgaagttccttgat
gcacttagatttgagcttagtacaaggagataagtatggatcgattcgca
ttcttctacatgataacaaccagttgtgccagcaccagttgttgaaaatg
ctgtctttcttccactggatggttttagctcccttgtcgaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtctctataccagtaccatgcagtttttatcacaattgct
ctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctttt
atccttgagaagagtttttgctatcctaggttttttgttattccagatga
atttgcaaattgctccttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccaatccatgagcatggaagatctttccatcttc
taagatcttctttaatttctttcttcagagatttgaagtttttatcatac
agatctttcacttccttagttagagtcacgctaagatattttatattatt
ttgtga
gaattccttacaaccccatgggacaaggaatagttgaacgtgctcatcgc
accttaaagaattggctctttaagacaaaagaggggcagctatatccccc
aaggtcaccaaaggcccaccttgccttcactttatttgtcctaaatttct
tgcacaccgatatcaagggccagtctgcagcggatcgccactggcatcca
gttacttattcttatgcattggtaaaatggaaggaccccctgactaatga
atagaagggtccagatccagttctaatttggggtaggggctcagtttgtg
ttttttcacgagatgaagatggagcgcggtggctgccagagagattaatt
cgtcagatgaacacagattctgactcttctggtaagtatcattctaaaga
ctaaaattccttttgtgcttaaaattcagctgagagcaacagctctcaaa
gctgttctccagctactctctgagccagctcccgacaggaggccagagac
tagcctcagctttacaatttgcatttgaataaagtacctagacttcccga
aagaagttctgctttcctactttctcactgtctttcaagattttgtcttt
caagcaggtaaatcaacattctcgaggcggaccagcagatgtgcatcccc
gcccccctagaacacacaggtggcagctgttacccccagtctcaggacat
ttccagcacgtggttttcagtctaagttaaaaatttaggtttacctagag
ggctagaagagtagatatttctacattaataagattggtttttatttttt
gatagacaggcttagccccttagctgacctctggcttttcacccttgctg
ttactgcaagtgtccttagctcaataggctgtagaaaaaacagggatgaa
gagaaacgacttcctagctcctattttagccacaaatcgtggtgttacta
acgacataattcttgcttagctttgctaattctgagttgataattctcct
ttagagctgcacagcaccccagaactgtgcatactggtttgtgatgtaca
aattcagtattgggcacgcttgtgcagaagtactgcagaaaagtccgctt
gaccatttctgagttcttgtgagattaaccggttaaaaaggtgtaccaat
tcgttaaaataaaattccgaactacctgcctccaaggtactgagaccagt
gtggtgttactccccgagaataactcgtgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776581_142777698
seq2: B6Ng01-083B13.b_43_699 (reverse)

seq1  CAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTTT  50

seq1  ACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAGACAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAGACAGA  100

seq1  CAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACAC  150

seq1  CTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAGA  200

seq1  AAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGT  250
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AAGACAGCATTTTCAACAACTGGTGCTGGCACAACTGGTTGTTATCATGT  250

seq1  AGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATC  300
      ||||||||| |||||||||||||||||||||||||||||||| |||||||
seq2  AGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGCTCAAATC  300

seq1  TAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAG  350
      |||||| |||||||||||||||||||||||||||| ||||||||||||||
seq2  TAAGTGCATCAAGGAACTTCACATAAAACCAGAGATACTGAAACTTATAG  350

seq1  AGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATTC  400
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTC  400

seq1  CTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATG  450
      |||||||||||||||||||||||||||||||||  |||||||||||||||
seq2  CTGAACAGAACAGCAATGGCTTGTGCTGTAAGAAAGAGAATTGACAAATG  450

seq1  GGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATA  500
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACAGTCAATA  500

seq1  AGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAA  550

seq1  TCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGA  600
      |||||||||||||| |||||||||||||||||||||| ||| || |||||
seq2  TCAGATAGGGGACT-ATATCCAACATATATAAAGAACACAATAATGTGGA  599

seq1  CTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCACAAAACCATC  650
      |||||||||||||||||||||||||||||||||||||||| ||       
seq2  CTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAA-------  642

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  700
           ||| |||||    |||                             
seq2  ---CTGAACAAAGA----ATTC----------------------------  657

seq1  GTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTA  750
                                                        
seq2  --------------------------------------------------  657

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  800
                                                        
seq2  --------------------------------------------------  657

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  850
                                                        
seq2  --------------------------------------------------  657

seq1  GGAAAAATTCCTGAACAGAAGAGCAATGGCTTGTGCTGTAAGATCGAGAA  900
                                                        
seq2  --------------------------------------------------  657

seq1  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  950
                                                        
seq2  --------------------------------------------------  657

seq1  ACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTAC  1000
                                                        
seq2  --------------------------------------------------  657

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  1050
                                                        
seq2  --------------------------------------------------  657

seq1  AGAAGGTGGACCTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  1100
                                                        
seq2  --------------------------------------------------  657

seq1  GAACTGAACAAAGAATTC  1118
                        
seq2  ------------------  657