MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-083D17
Chromosome	2 (Build37)
Map Location	52,397,447 - 52,397,682
singlet/doublet	singlet
Overlap gene	Cacnb4
Upstream gene	LOC666810, LOC100041614, Tas2r134, LOC433426, Ppia-ps2_635.1, Rbm43, LOC100041634, Nmi, Tnfaip6, Rif1, Neb, LOC100041670, Arl5a
Downstream gene	OTTMUSG00000012638, Stam2, Fmnl2, Prpf40a, Arl6ip6, LOC666872
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC666810 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666810
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100041614 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041614
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Tas2r134 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:387511 MGI:2681300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC433426 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433426
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Ppia-ps2_635.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606530
definition	note : peptidylprolyl isomerase A (Ppia) pseudogene 2_635.1 pseudo : _no_value

name	Rbm43 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71684 MGI:1918934
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041634 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041634
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Nmi (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64685 MGI:1928368
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tnfaip6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21930 MGI:1195266
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rif1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:51869 MGI:1098622
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Neb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17996 MGI:97292
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 40 ESTs, 5 Proteins

name	LOC100041670 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041670
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Arl5a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75423 MGI:1922673
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cacnb4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12298 MGI:103301
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	OTTMUSG00000012638 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625631 MGI:3702045
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 49 ESTs, 5 Proteins

name	Stam2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56324 MGI:1929100
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fmnl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71409 MGI:1918659
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prpf40a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56194 MGI:1860512
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arl6ip6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:65103 MGI:1929507
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666872 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666872
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 Proteins pseudo : _no_value

name	Tas2r134 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46849786 GeneID:387511 MGI:2681300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : taste receptor, type 2, member 134 transcript_id : NM_199158.1

name	LOC433426 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94366435 GeneID:433426
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical gene supported by AK028256 transcript_id : XM_488944.3

name	Rbm43 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802930 GeneID:71684 MGI:1918934
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA binding motif protein 43 transcript_id : NM_030243.3

name	Nmi (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33469124 GeneID:64685 MGI:1928368
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : N-myc (and STAT) interactor transcript_id : NM_019401.1

name	Tnfaip6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130407 GeneID:21930 MGI:1195266
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor necrosis factor alpha induced protein 6 transcript_id : NM_009398.2

name	Rif1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47087462 GeneID:51869 MGI:1098622
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rap1 interacting factor 1 homolog (yeast) transcript_id : NM_175238.4

name	Neb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94366440 GeneID:17996 MGI:97292
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 40 ESTs, 5 Proteins product : nebulin transcript_id : XM_130232.8

name	LOC100041670 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249281 GeneID:100041670
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041670 transcript_id : XM_001476803.1

name	Arl5a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130709 GeneID:75423 MGI:1922673
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor-like 5A transcript_id : NM_182994.2

name	Cacnb4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:80861467 GeneID:12298 MGI:103301
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium channel, voltage-dependent, beta 4 subunit transcript_id : NM_001037099.1

name	Cacnb4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:80861469 GeneID:12298 MGI:103301
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium channel, voltage-dependent, beta 4 subunit transcript_id : NM_146123.2

name	OTTMUSG00000012638 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249315 GeneID:625631 MGI:3702045
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 49 ESTs, 5 Proteins product : predicted gene, OTTMUSG00000012638 transcript_id : XM_894739.3

name	Stam2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543774 GeneID:56324 MGI:1929100
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 transcript_id : NM_019667.2

name	Fmnl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124378047 GeneID:71409 MGI:1918659
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : formin-like 2 transcript_id : NM_172409.2

name	Prpf40a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130745 GeneID:56194 MGI:1860512
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PRP40 pre-mRNA processing factor 40 homolog A (yeast) transcript_id : NM_018785.2

name	Arl6ip6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801908 GeneID:65103 MGI:1929507
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor-like 6 interacting protein 6 transcript_id : NM_022989.3

name	Tas2r134 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46849787 CCDS:CCDS16029.1 GeneID:387511 MGI:2681300
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence NAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0008527 - taste receptor activity [Evidence NAS] GO_process : GO:0001580 - detection of chemical stimulus during sensory perception of bitter taste [Evidence ISS] [Evidence NAS]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0050909 - sensory perception of taste [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : taste receptor, type 2, member 134 protein_id : NP_954609.1

name	LOC433426 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82884585 GeneID:433426
definition	codon_start : 1 product : hypothetical protein protein_id : XP_488944.2

name	Rbm43 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313604 CCDS:CCDS16030.1 GeneID:71684 MGI:1918934
definition	GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : RNA binding motif protein 43 protein_id : NP_084519.1

name	Nmi (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33469125 CCDS:CCDS16031.1 GeneID:64685 MGI:1928368
definition	codon_start : 1 product : N-mcy (and STAT) interactor protein_id : NP_062274.1

name	Tnfaip6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678379 CCDS:CCDS16032.1 GeneID:21930 MGI:1195266
definition	GO_function : GO:0005540 - hyaluronic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 note : tumor necrosis factor induced protein 6 product : tumor necrosis factor alpha induced protein 6 protein_id : NP_033424.1

name	Rif1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47087463 GeneID:51869 MGI:1098622
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0000781 - chromosome, telomeric region [Evidence IDA]; GO:0001939 - female pronucleus [Evidence IDA]; GO:0001940 - male pronucleus [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA]; GO:0000723 - telomere maintenance [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : telomere-associated protein RIF1 protein_id : NP_780447.3

name	Neb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82884589 GeneID:17996 MGI:97292
definition	codon_start : 1 product : nebulin protein_id : XP_130232.7

name	LOC100041670 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249282 GeneID:100041670
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476853.1

name	Arl5a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33695144 CCDS:CCDS16033.1 GeneID:75423 MGI:1922673
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA] codon_start : 1 product : ADP-ribosylation factor-like 5 protein_id : NP_892039.1

name	Cacnb4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:80861468 CCDS:CCDS16034.1 GeneID:12298 MGI:103301
definition	GO_component : GO:0005891 - voltage-gated calcium channel complex [Evidence TAS] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0008331 - high voltage-gated calcium channel activity [Evidence TAS]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : calcium channel, voltage-dependent, beta 4 subunit isoform a protein_id : NP_001032176.1

name	Cacnb4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22164786 CCDS:CCDS16035.1 GeneID:12298 MGI:103301
definition	GO_component : GO:0005891 - voltage-gated calcium channel complex [Evidence TAS] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0008331 - high voltage-gated calcium channel activity [Evidence TAS]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : calcium channel, voltage-dependent, beta 4 subunit isoform b protein_id : NP_666235.1

name	OTTMUSG00000012638 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82884559 GeneID:625631 MGI:3702045
definition	codon_start : 1 product : hypothetical protein protein_id : XP_899832.1

name	Stam2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9789975 CCDS:CCDS16037.1 GeneID:56324 MGI:1929100
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004888 - transmembrane receptor activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : Hrs binding protein product : signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 protein_id : NP_062641.1

name	Fmnl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124378048 GeneID:71409 MGI:1918659
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0017048 - Rho GTPase binding [Evidence IEA] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence IEA]; GO:0008150 - biological_process [Evidence ND]; GO:0016043 - cell organization and biogenesis [Evidence IEA] codon_start : 1 product : formin-like domain containing protein MAN protein_id : NP_765997.2

name	Prpf40a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055218 CCDS:CCDS16038.1 GeneID:56194 MGI:1860512
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA] codon_start : 1 note : formin binding protein 11; pre-mRNA processing factor 40 homolog A product : formin binding protein 3 protein_id : NP_061255.1

name	Arl6ip6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560285 CCDS:CCDS16039.1 GeneID:65103 MGI:1929507
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 exception : mismatches in translation note : ADP-ribosylation-like factor 6 interacting protein 6 product : ADP-ribosylation-like factor 6-interacting protein 6 protein_id : NP_075365.2

name	LOC666810 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666810
definition	number : 3 pseudo : _no_value

name	LOC666810 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666810
definition	number : 4 pseudo : _no_value

name	LOC666810 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666810
definition	number : 5 pseudo : _no_value

name	LOC100041614 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041614
definition	number : 4 pseudo : _no_value

name	LOC100041614 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041614
definition	number : 3 pseudo : _no_value

name	LOC100041614 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041614
definition	number : 2 pseudo : _no_value

name	LOC100041614 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041614
definition	number : 1 pseudo : _no_value

name	LOC100041634 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041634
definition	number : 1 pseudo : _no_value

name	LOC100041634 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041634
definition	number : 2 pseudo : _no_value

name	LOC666872 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666872
definition	number : 2 pseudo : _no_value

name	LOC666872 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666872
definition	number : 1 pseudo : _no_value

clone name	MSMg01-441E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058A13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-326H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296O18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-376M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123P05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-479L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055L24
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-083D17.b	B6Ng01-083D17.g
ACC	DH897552	DH897553
length	272	1,159
definition	DH897552\|Mus musculus domesticus DNA, BAC clone: B6Ng01-083D17, 5' end.	DH897553\|Mus musculus domesticus DNA, BAC clone: B6Ng01-083D17, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctttttttttttttaattttttattaggtatttagctcatttaca tttccaatgctataccaaaagtcccccatacccacccacccccactcccc tacccacccaccccccctcccttaccctggcgttcccctgtcctggggcc cataaagtttgtgtgggccatgggcctcccctgccctggacgtccaaaca ttgcgtcttcaaaggcactctctttccaatgatggaccaccaggccatcg tttgatacatattctgcttcca	gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaactctgagat tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc atatatccagaagatgccccaactggtaagaaggacacatgctccactat gttcatagcagccttatttataatagccagaagctggaaagaacccagat gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa atggatggacctggagggcatcatcctgagtgaggtaacacaatcacaaa ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc taggatacccaagatataagatacaatttcctaaacacatgaaactcaag aaaaatgaagactgaagtgtggacactatgcccctcctttagaagtggga acaaaacacccttggaaggagttacagagacaaagtttggagctgagatg aaaggatggaccatgtagagactgccatatccagggatccaccctataat cagcatccaaacgctgacaccattgcatacactagcaagattttatcgaa aggacccagatgtagctgtctcttgtgagactatgcaggggcctagcaaa cacagaagtttatgctcacagtcagctaatggatggatcacaggctccct atggaggagctagagaagtacccaaggagctaaaggatctgcaccctata gtggatcacattatgactactagtaccccgagctctttactctagctgca tattgtatcaaagatgctagtcagcatcactgcaagagaagtcaatgacc gcaccttatatgccagaaacgggtacgcagcaaaaggggattgccgttag gcattgtgg
quality values	Open. Hide. 55 47 55 49 61 61 61 61 59 59 61 61 61 61 61 61 61 59 59 49 41 59 61 61 61 61 39 39 36 28 20 24 28 27 36 39 59 61 59 59 59 61 59 59 61 61 61 59 61 59 61 61 61 61 59 59 59 59 61 59 59 59 59 59 59 59 59 59 61 59 61 59 59 61 59 55 59 59 59 59 59 59 59 59 61 59 61 61 61 59 61 61 61 59 61 61 61 61 59 59 59 59 59 59 59 59 61 61 59 25 29 18 27 29 27 18 20 14 12 12 8 6 12 10 12 13 17 18 22 13 12 11 13 13 21 18 17 27 32 25 13 9 25 19 25 19 18 13 11 11 13 13 11 12 18 13 13 18 13 13 13 13 12 22 26 18 13 22 11 18 18 35 30 19 24 26 32 36 18 27 18 27 12 12 13 18 13 18 24 18 12 13 12 12 18 13 25 17 12 11 12 10 12 12 10 19 12 27 17 20 17 12 10 18 18 13 12 12 12 12 9 22 10 10 11 12 13 10 13 12 12 11 13 12 8 8 12 12 11 23 10 11 18 26 11 11 19 15 13 8 12 24 20 12 12 13 12 21 15 15 24 12 11 10 10 12 12 12 18 36 23 22	Open. Hide. 59 59 52 59 61 38 38 38 24 35 29 26 26 22 12 44 59 45 61 59 61 61 59 61 61 61 61 61 59 61 59 61 59 61 59 52 59 59 59 59 61 59 59 61 61 61 61 61 59 59 61 59 59 52 59 59 59 59 59 61 61 61 61 61 61 61 55 59 61 59 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 61 59 59 59 61 61 61 61 61 59 61 61 61 61 59 61 59 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 55 55 59 55 59 61 61 61 61 59 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 61 61 59 61 59 59 61 61 61 59 61 61 59 55 55 59 59 59 61 61 61 59 59 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 55 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 55 61 61 55 61 61 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 41 61 52 61 53 61 61 57 53 57 57 53 53 57 52 57 57 53 57 57 57 53 57 57 53 57 53 57 47 57 57 57 57 57 57 57 57 57 57 45 57 57 57 51 53 53 57 57 53 57 57 57 50 53 52 53 57 50 57 57 53 52 51 57 43 41 57 53 53 34 47 41 42 50 52 57 43 38 57 45 57 46 45 53 47 57 53 57 33 53 53 53 47 47 57 53 53 53 53 50 57 57 52 53 53 47 57 53 57 57 57 53 57 50 53 46 52 57 57 57 52 50 43 50 57 53 40 53 35 50 57 53 57 37 53 57 42 52 57 31 35 38 52 52 50 53 53 46 21 16 33 47 37 17 7 41 16 38 36 52 52 42 48 46 33 41 45 36 37 25 57 57 40 40 36 53 46 34 40 27 40 53 44 48 28 57 38 27 52 40 28 42 34 40 53 24 33 37 31 57 45 31 48 57 40 53 40 44 18 40 53 37 53 19 37 28 36 46 57 47 22 37 29 25 44 51 32 25 32 29 32 32 29 32 34 46 30 29 27 35 48 27 31 30 30 32 34 35 40 24 30 46 46 20 29 24 32 18 23 51 29 33 29 37 29 39 35 29 29 29 29 32 30 29 29 29 51 27 29 37 41 37 29 34 22 24 28 23 20 43 29 37 26 15 29 28 29 28 43 33 33 23 29 20 30 29 34 20 51 51 30 26 29 35 14 33 51 23 21 24 29 23 51 31 24 18 35 21 35 25 24 22 33 35 29 28 29 28 34 19 39 26 22 28 29 11 29 15 28 28 28 28 28 9 15 36 36 22 23 25 30 31 20 28 28 43 33 20 23 29 27 20 29 32 16 32 36 15 20 16 22 27 25 31 23 19 13 28 31 34 31 27 34 28 17 28 24 32 22 18 25 22 28 10 19 31 22 28 5 7 6 15 17 8 35 22 4 9 17 15 17 10 5 4 8 11 30 29 17 14 12 10 33 34 13 20 18 28 42 34 9 7 21 9 26 12 27 32 10 44 6 21 10 10 20 23 29 29 19 30 11 36 14 31 23 18 5 22 6 12 22 9 23 19 15 3 1 4 5 14 31 12 29 16 21 19 6 12 18 29 14 9 27 30 30 14 24 9 7 15 23 15 10 27 21 6 16 20 23 24 19 17 24 22 23 7 4 7 6 6 5 5 6 5 6 12 23 30 9 9 17 8 10 4 2 15 6 11 24 17 6 19 5 9 9 4 4 6 5 1 4 4 4 5 6 6 12 3 1 4 4 4 18 7 3 3 10 5 6 6 3 4 27 16 5 3 7 20 9 14 14 4 5 4 23 5 4 14 25 6 1 6 5 4 17 6 10 4 4 11 13 11 9 13 14 9 18 4 4 8 3 1 3 1 2 6 5 4 1 3 6 5 8 6 6 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_52397447_52397682
seq2: B6Ng01-083D17.b_49_310 (reverse)

seq1  AGAATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGC  50
      ||||||||||||||| |||||||| || | |||||| |||||||||||  
seq2  AGAATATGTATCAAACGATGGCCTGGTGGTCCATCATTGGAAAGAGAGTG  50

seq1  CCATTG--GAC-------TTG-----------------------------  62
      || |||  |||       |||                             
seq2  CCTTTGAAGACGCAATGTTTGGACGTCCAGGGCAGGGGAGGCCCATGGCC  100

seq1  ----CAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGG  108
          ||||||||||  ||||||| |||||||||||||||||  |   |||
seq2  CACACAAACTTTATGGGCCCCAGGACAGGGGAACGCCAGGGTAAGGGAGG  150

seq1  GGGAGTGGGTGGGTAGGGGAGTGGGGGTGGGTGGGTATGGGGGACTTTTG  158
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTGGGTGGGTAGGGGAGTGGGGGTGGGTGGGTATGGGGGACTTTTG  200

seq1  GTATAGCATTGGAAATGTAAATGAGCTAAATACTTAATAAAAAATGGAAA  208
      ||||||||||||||||||||||||||||||||| ||||||          
seq2  GTATAGCATTGGAAATGTAAATGAGCTAAATACCTAATAA----------  240

seq1  AAAAATAAAATTAAAAAAAAAAAAAGAA  236
            ||||||||||||||||||||||
seq2  ------AAAATTAAAAAAAAAAAAAGAA  262

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information