BAC Information

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BAC

Clone NameB6Ng01-083O07
Chromosome2 (Build37)
Map Location 50,779,481 - 50,836,980
singlet/doubletdoublet
Overlap genenone
Upstream gene2310010M24Rik, Lypd6, 2010311D03Rik, LOC666781, LOC227885
Downstream geneRnd3, LOC666802, LOC666810, LOC100041614, Tas2r134, LOC433426, Ppia-ps2_635.1, Rbm43, LOC100041634, Nmi
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083O07.bB6Ng01-083O07.g
ACCDH898023DH898024
length932788
definitionDH898023|Mus musculus domesticus DNA, BAC clone: B6Ng01-083O07, 5' end.DH898024|Mus musculus domesticus DNA, BAC clone: B6Ng01-083O07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,836,049 - 50,836,980)(50,779,481 - 50,780,151)
sequence
gaattccatcacaggaaaaaaataggtttccagaccatctctttgattgc
actgtatgccactgaaaggtagcttcactaacaattttcttctctctgga
aatattttccttccttcctctttactggaatgtaattttactacagggaa
gccaagaaatggggaaccgcagatcctacactatgctcaacagcttgtgt
gtgtgtgtgtgtgtgtgtgttagtgtgacctctgtattggtcagtgtgtt
tttctgattgtagtaagatctactgagtagtatgtattataacacagact
ttctaaaattttgttgcacaagtaataatcagatctttatcttcagatta
tgtgtttacagcaaaaataaggataagctacagaacctttttacacactg
tttatcatatgcacacggcctcctcactatcagtttcttctactgagggg
tccacttgctatgtaccactgatggtaccagtgatggcatacactgacct
tttattgttttgcggagtccagagcttacctgagtgtttctacttgttgc
tgtacatgttgtagatttgcagatccaatcgtgacaacattctacatact
ctacctgttcatcctttatcactgcccccccccaacccacccctgtgtga
ccactgatctcttttattgtatccaaaattttggattctccgggaccaca
cagctgaaattggatagtatgtaacttcttctgtttggcgatatatttag
taacatatattcagatgtcctcagtgccttctcattgcttaatgtctcac
ttttctctactgataacgttaaagacgtgctacagaatctttctaaggaa
acaatcgagatggttttggtggaagagagagcacagttctgggtacgccg
aggaaggaacagggttgttggtttgtgggggg
gaattctaaacggggaggggggaggggaatcacaattttattcatcgttt
tcaggctgttgattgggtgtccatattaatgaactttccattttaattta
aatagatttttcatgtgttgtgcttgtacgtcttgcgcaagtgctgggct
tctgagctgccccactgtcccactgggctattgagaataaggttgttatg
aatattaatgtatgagcttttatatgaacacaggttttcacttctcaata
cttatatccatgacgaaactgctggaccacacttggtcccaagtttagtt
tttaaagaaactgattcttcaggatgatgctgtatctttcatttctagaa
acaataatatagcttttctctagccttgtgagcagtctgtggagggtccc
agtctacaaacataatacacttcttgttgtctttaaatattctttgaatt
cttaacatccacatttgtgaattttatctaatagattctatctgttttgt
tatatttgtatcaaaatactcatttttttgtgcacctgctagtggcatat
tttttatttcagtggccacacatggtttgctggtttatgaaaaatataac
tgattttttctatgtttattctgtatatttagaccttgataacctactag
ttctaggaaatacataagatacatatgtgtgtgggtatatatggacacat
cagcactcatgagcacacacaatttccatgtagaaaatcactctgcatgt
ctgcaaatagaatagttatttttttcctgtctgtgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_50836049_50836980
seq2: B6Ng01-083O07.b_44_975 (reverse)

seq1  CCCCCCACAAACCAACAACCCTGTTCCTTCCTCGGCGTACCCAGAACTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCACAAACCAACAACCCTGTTCCTTCCTCGGCGTACCCAGAACTGT  50

seq1  GCTCTCTCTTCCACCAAAACCATCTCGATTGTTTCCTTAGAAAGATTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTCTTCCACCAAAACCATCTCGATTGTTTCCTTAGAAAGATTCTG  100

seq1  TAGCACGTCTTTAACGTTATCAGTAGAGAAAAGTGAGACATTAAGCAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACGTCTTTAACGTTATCAGTAGAGAAAAGTGAGACATTAAGCAATG  150

seq1  AGAAGGCACTGAGGACATCTGAATATATGTTACTAAATATATCGCCAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCACTGAGGACATCTGAATATATGTTACTAAATATATCGCCAAAC  200

seq1  AGAAGAAGTTACATACTATCCAATTTCAGCTGTGTGGTCCCGGAGAATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAGTTACATACTATCCAATTTCAGCTGTGTGGTCCCGGAGAATCC  250

seq1  AAAATTTTGGATACAATAAAAGAGATCAGTGGTCACACAGGGGTGGGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTGGATACAATAAAAGAGATCAGTGGTCACACAGGGGTGGGTTG  300

seq1  GGGGGGGGCAGTGATAAAGGATGAACAGGTAGAGTATGTAGAATGTTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGGCAGTGATAAAGGATGAACAGGTAGAGTATGTAGAATGTTGTC  350

seq1  ACGATTGGATCTGCAAATCTACAACATGTACAGCAACAAGTAGAAACACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATTGGATCTGCAAATCTACAACATGTACAGCAACAAGTAGAAACACT  400

seq1  CAGGTAAGCTCTGGACTCCGCAAAACAATAAAAGGTCAGTGTATGCCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAAGCTCTGGACTCCGCAAAACAATAAAAGGTCAGTGTATGCCATC  450

seq1  ACTGGTACCATCAGTGGTACATAGCAAGTGGACCCCTCAGTAGAAGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTACCATCAGTGGTACATAGCAAGTGGACCCCTCAGTAGAAGAAAC  500

seq1  TGATAGTGAGGAGGCCGTGTGCATATGATAAACAGTGTGTAAAAAGGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGTGAGGAGGCCGTGTGCATATGATAAACAGTGTGTAAAAAGGTTC  550

seq1  TGTAGCTTATCCTTATTTTTGCTGTAAACACATAATCTGAAGATAAAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTTATCCTTATTTTTGCTGTAAACACATAATCTGAAGATAAAGAT  600

seq1  CTGATTATTACTTGTGCAACAAAATTTTAGAAAGTCTGTGTTATAATACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTATTACTTGTGCAACAAAATTTTAGAAAGTCTGTGTTATAATACA  650

seq1  TACTACTCAGTAGATCTTACTACAATCAGAAAAACACACTGACCAATACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACTCAGTAGATCTTACTACAATCAGAAAAACACACTGACCAATACA  700

seq1  GAGGTCACACTAACACACACACACACACACACACACAAGCTGTTGAGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCACACTAACACACACACACACACACACACACAAGCTGTTGAGCAT  750

seq1  AGTGTAGGATCTGCGGTTCCCCATTTCTTGGCTTCCCTGTAGTAAAATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAGGATCTGCGGTTCCCCATTTCTTGGCTTCCCTGTAGTAAAATTA  800

seq1  CATTCCAGTAAAGAGGAAGGAAGGAAAATATTTCCAGAGAGAAGAAAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCAGTAAAGAGGAAGGAAGGAAAATATTTCCAGAGAGAAGAAAATT  850

seq1  GTTAGTGAAGCTACCTTTCAGTGGCATACAGTGCAATCAAAGAGATGGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTGAAGCTACCTTTCAGTGGCATACAGTGCAATCAAAGAGATGGTC  900

seq1  TGGAAACCTATTTTTTTCCTGTGATGGAATTC  932
      ||||||||||||||||||||||||||||||||
seq2  TGGAAACCTATTTTTTTCCTGTGATGGAATTC  932

seq1: chr2_50779481_50780151
seq2: B6Ng01-083O07.g_69_739

seq1  GAATTCTAAACGGGGAGGGGGGAGGGGAATCACAATTTTATTCATCGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAACGGGGAGGGGGGAGGGGAATCACAATTTTATTCATCGTTT  50

seq1  TCAGGCTGTTGATTGGGTGTCCATATTAATGAACTTTCCATTTTAATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTGTTGATTGGGTGTCCATATTAATGAACTTTCCATTTTAATTTA  100

seq1  AATAGATTTTTCATGTGTTGTGCTTGTACGTCTTGCGCAAGTGCTGGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATTTTTCATGTGTTGTGCTTGTACGTCTTGCGCAAGTGCTGGGCT  150

seq1  TCTGAGCTGCCCCACTGTCCCACTGGGCTATTGAGAATAAGGTTGTTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCTGCCCCACTGTCCCACTGGGCTATTGAGAATAAGGTTGTTATG  200

seq1  AATATTAATGTATGAGCTTTTATATGAACACAGGTTTTCACTTCTCAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAATGTATGAGCTTTTATATGAACACAGGTTTTCACTTCTCAATA  250

seq1  CTTATATCCATGACGAAACTGCTGGACCACACTTGGTCCCAAGTTTAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATCCATGACGAAACTGCTGGACCACACTTGGTCCCAAGTTTAGTT  300

seq1  TTTAAAGAAACTGATTCTTCAGGATGATGCTGTATCTTTCATTTCTAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGAAACTGATTCTTCAGGATGATGCTGTATCTTTCATTTCTAGAA  350

seq1  ACAATAATATAGCTTTTCTCTAGCCTTGTGAGCAGTCTGTGGAGGGTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAATATAGCTTTTCTCTAGCCTTGTGAGCAGTCTGTGGAGGGTCCC  400

seq1  AGTCTACAAACATAATACACTTCTTGTTGTCTTTAAATATTCTTTGAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTACAAACATAATACACTTCTTGTTGTCTTTAAATATTCTTTGAATT  450

seq1  CTTAACATCCACATTTGTGAATTTTATCTAATAGATTCTATCTGTTTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACATCCACATTTGTGAATTTTATCTAATAGATTCTATCTGTTTTGT  500

seq1  TATATTTGTATCAAAATACTCATTTTTTTGTGCACCTGCTAGTGGCATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTGTATCAAAATACTCATTTTTTTGTGCACCTGCTAGTGGCATAT  550

seq1  TTTTTATTTCAGTGGCCACACATGGTTTGCTGGTTTATGAAAAATATAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTTCAGTGGCCACACATGGTTTGCTGGTTTATGAAAAATATAAC  600

seq1  TGATTTTTTCTATGTTTATTCTGTATATTTAGACCTTGATAACCTACTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTTCTATGTTTATTCTGTATATTTAGACCTTGATAACCTACTAG  650

seq1  TTCTAGGAAATACATAAGATA  671
      |||||||||||||||||||||
seq2  TTCTAGGAAATACATAAGATA  671