BAC Information

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BAC

Clone NameB6Ng01-084H13
Chromosome2 (Build37)
Map Location 76,371,816 - 76,489,137
singlet/doubletdoublet
Overlap geneOsbpl6, Prkra, Dfnb59
Upstream geneLOC100040324, LOC667828, Hnrpa3, Nfe2l2, E030042O20Rik, LOC623453, Agps, Ttc30b, Ttc30a2, Ttc30a1, Pde11a, Cyct, Drbp1
Downstream geneFkbp7, Plekha3, Ttn, 2610301F02Rik, Sestd1, LOC623706, LOC667906, Zfp533
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084H13.bB6Ng01-084H13.g
ACCDH898419DH898420
length1,202589
definitionDH898419|Mus musculus domesticus DNA, BAC clone: B6Ng01-084H13, 5' end.DH898420|Mus musculus domesticus DNA, BAC clone: B6Ng01-084H13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,487,909 - 76,489,137)(76,371,816 - 76,372,404)
sequence
gaattcatttcagggttgggagatggttcagttgttaaagtgtatgttta
taagcaggaaaattcaagttcaatcttccagtgcccacatttctaaaaaa
ctgagtttacctattatagtaaactgtaaaataatttaaattactttcat
ttatttgatcatgtaaatgggtaagacccaataatatcctatattttaca
ggtcaagacacatcatttttctaagcccacttagttaaaaacaacttata
attgattttaaaattaagcaataagcaatttgaaactataaaaatttaag
cattgttcacctgaatgatattattaccacataaaaattgattttattct
taaaatgcgtattgttaatataattaatccatacaacccctgttaggtta
ttaatgatatagccccatcatgagtcactctcgcacatttaaacttacca
gctgaaatttctcgatctcccaggagaatatctttaagtgtgaaaggagt
ggatgtgaatttgcatctaggaaacagaaaacaccgcttctttttcacca
ccagactcaggggttggtacttgtcagcttcgctgaggcttgggacaggg
actaatctccctccatctccaacttgcttaacgaagctcttggtagcagc
agcaaacatattaatatcaagatgtcatcaactgcgaccctcaggcaacg
aacccatttttgaagaagagaatcagacaccaaactaagccttccttgat
gttaaatacagttacgcaggttagaactataaagcccacgctcaccaagt
agtttgctggtgtgcaattcacaacagcacctcccttcatgaactcgggt
aatgaataatagatggtagtgtaaatgatacactaaaagcaagtctaact
cggaatggcagcctacagaactaaatatatagagaaaactaattcaaact
accaaagtccttgaggagaccacagttgaaagggctttcccccagcaatg
agccagttggaaggagctcacagcaaacggtgcaagtgggctctatctaa
cattaggcctgatatgatctgcagtgccatcatccagagattctttcaca
agtcagcagtgattgcagcgaaagtacttttgagctcccagtgtaagatc
taaccagcatgtctctcatcgaattttgtatgtctgtgaactttatgttt
ag
gaattcattgcttaccatagatgcttttcaattctgtctttctttttctt
tatttacttatttccagtaagtatataagggcgctctctctctctctctc
tctctctctcgtgtgtgtgtgtgtgtgtgtgtgtgtggctttaaaacagt
attgggaatatcataactgtcattaaactgtcagcttttatatgattatg
ttataagccttagcaccataaatttaaacctaaagttaaatgaagatgga
agaataggaggaagggttgcaggccctgaaggggatgggaactccacagg
aagaccaacagagtcaactaacccggacccttgggctctcagagtctgaa
cccccaaccaaagaacatacacaggctagacctagtcctccctgcatata
tgtagcagatgtgcagctcggccttcatgtgggtcccaaacatctggaac
aggggctatcttaaaagctgttccctgtacatgggatatgttctactagc
tgggctgccttgtctggcctcagtgggagaggaagtgcctagcctcacag
agacttgaagtgccagggttgggtggggtgtgggtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_76487909_76489137
seq2: B6Ng01-084H13.b_45_1246 (reverse)

seq1  CTAAACATATAGTTTCACAAGCATACAAAAATCTGGATGAGAGACATGCC  50
      ||||||||| || ||||||  ||||||||| ||  ||||||||||||| |
seq2  CTAAACATAAAG-TTCACAGACATACAAAATTC--GATGAGAGACATG-C  46

seq1  TGTGTTAGGATCTGTACACTGTGAAGCTTCAAAAAGTACTTTTCTGCTGC  100
      || |||| ||||| ||||||| | ||||   |||||||||||   |||||
seq2  TG-GTTA-GATCT-TACACTG-GGAGCT--CAAAAGTACTTT--CGCTGC  88

seq1  CAAAATTCACCTGCTGGACTTGTGAAAGAATTCCTCTTGGATGATGGCCA  150
          | ||| ||||| |||||||||||||||  ||| |||||||||| ||
seq2  ----AATCA-CTGCT-GACTTGTGAAAGAAT--CTC-TGGATGATGG-CA  128

seq1  CTGCAGATCATATCCAGGCCTAATGTTAGATTAGAGCCCACTTGCACCGT  200
      ||||||||||||| |||||||||||||||| |||||||||||||||||||
seq2  CTGCAGATCATAT-CAGGCCTAATGTTAGA-TAGAGCCCACTTGCACCGT  176

seq1  TTGCTGTGAGCCTCCTTCCAACTGGCTCATTGCTGGGGGGAAAGCCCTTT  250
      |||||||||| ||||||||||||||||||||||| |||||||||||||||
seq2  TTGCTGTGAG-CTCCTTCCAACTGGCTCATTGCT-GGGGGAAAGCCCTTT  224

seq1  CAACTGTGGTCTCCTCAAGGACTTTGGTAGTTTGAATTAGTTTTCTCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGTGGTCTCCTCAAGGACTTTGGTAGTTTGAATTAGTTTTCTCTAT  274

seq1  ATATTTTAGTTCTGTAGGCTGCCATTCCGAGTTAGACTTGCTTTTAGTGT  350
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATA-TTTAGTTCTGTAGGCTGCCATTCCGAGTTAGACTTGCTTTTAGTGT  323

seq1  ATCATTTACACTACCATCTATTATTCATTACCCGAGTTCATGAAGGGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTACACTACCATCTATTATTCATTACCCGAGTTCATGAAGGGAGG  373

seq1  TGCTGTTGTGAATTGCACACCAGCAAACTACTTGGTGAGCGTGGGCTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTGTGAATTGCACACCAGCAAACTACTTGGTGAGCGTGGGCTTTA  423

seq1  TAGTTCTAACCTGCGTAACTGTATTTAACATCAAGGAAGGCTTAGTTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTAACCTGCGTAACTGTATTTAACATCAAGGAAGGCTTAGTTTGG  473

seq1  TGTCTGATTCTCTTCTTCAAAAATGGGTTCGTTGCCTGAGGGTCGCAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGATTCTCTTCTTCAAAAATGGGTTCGTTGCCTGAGGGTCGCAGTT  523

seq1  GATGACATCTTGATATTAATATGTTTGCTGCTGCTACCAAGAGCTTCGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACATCTTGATATTAATATGTTTGCTGCTGCTACCAAGAGCTTCGTT  573

seq1  AAGCAAGTTGGAGATGGAGGGAGATTAGTCCCTGTCCCAAGCCTCAGCGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGTTGGAGATGGAGGGAGATTAGTCCCTGTCCCAAGCCTCAGCGA  623

seq1  AGCTGACAAGTACCAACCCCTGAGTCTGGTGGTGAAAAAGAAGCGGTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGACAAGTACCAACCCCTGAGTCTGGTGGTGAAAAAGAAGCGGTGTT  673

seq1  TTCTGTTTCCTAGATGCAAATTCACATCCACTCCTTTCACACTTAAAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTCCTAGATGCAAATTCACATCCACTCCTTTCACACTTAAAGAT  723

seq1  ATTCTCCTGGGAGATCGAGAAATTTCAGCTGGTAAGTTTAAATGTGCGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCCTGGGAGATCGAGAAATTTCAGCTGGTAAGTTTAAATGTGCGAG  773

seq1  AGTGACTCATGATGGGGCTATATCATTAATAACCTAACAGGGGTTGTATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTCATGATGGGGCTATATCATTAATAACCTAACAGGGGTTGTATG  823

seq1  GATTAATTATATTAACAATACGCATTTTAAGAATAAAATCAATTTTTATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAATTATATTAACAATACGCATTTTAAGAATAAAATCAATTTTTATG  873

seq1  TGGTAATAATATCATTCAGGTGAACAATGCTTAAATTTTTATAGTTTCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAATAATATCATTCAGGTGAACAATGCTTAAATTTTTATAGTTTCAA  923

seq1  ATTGCTTATTGCTTAATTTTAAAATCAATTATAAGTTGTTTTTAACTAAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTATTGCTTAATTTTAAAATCAATTATAAGTTGTTTTTAACTAAG  973

seq1  TGGGCTTAGAAAAATGATGTGTCTTGACCTGTAAAATATAGGATATTATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTTAGAAAAATGATGTGTCTTGACCTGTAAAATATAGGATATTATT  1023

seq1  GGGTCTTACCCATTTACATGATCAAATAAATGAAAGTAATTTAAATTATT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTTACCCATTTACATGATCAAATAAATGAAAGTAATTTAAATTATT  1073

seq1  TTACAGTTTACTATAATAGGTAAACTCAGTTTTTTAGAAATGTGGGCACT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGTTTACTATAATAGGTAAACTCAGTTTTTTAGAAATGTGGGCACT  1123

seq1  GGAAGATTGAACTTGAATTTTCCTGCTTATAAACATACACTTTAACAACT  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATTGAACTTGAATTTTCCTGCTTATAAACATACACTTTAACAACT  1173

seq1  GAACCATCTCCCAACCCTGAAATGAATTC  1229
      |||||||||||||||||||||||||||||
seq2  GAACCATCTCCCAACCCTGAAATGAATTC  1202

seq1: chr2_76371816_76372404
seq2: B6Ng01-084H13.g_68_656

seq1  GAATTCATTGCTTACCATAGATGCTTTTCAATTCTGTCTTTCTTTTTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGCTTACCATAGATGCTTTTCAATTCTGTCTTTCTTTTTCTT  50

seq1  TATTTACTTATTTCCAGTAAGTATATAAGGGCGCTCTCTCTCTCTCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACTTATTTCCAGTAAGTATATAAGGGCGCTCTCTCTCTCTCTCTC  100

seq1  TCTCTCTCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTTTAAAACAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTTTAAAACAGT  150

seq1  ATTGGGAATATCATAACTGTCATTAAACTGTCAGCTTTTATATGATTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGAATATCATAACTGTCATTAAACTGTCAGCTTTTATATGATTATG  200

seq1  TTATAAGCCTTAGCACCATAAATTTAAACCTAAAGTTAAATGAAGATGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGCCTTAGCACCATAAATTTAAACCTAAAGTTAAATGAAGATGGA  250

seq1  AGAATAGGAGGAAGGGTTGCAGGCCCTGAAGGGGATGGGAACTCCACAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGGAGGAAGGGTTGCAGGCCCTGAAGGGGATGGGAACTCCACAGG  300

seq1  AAGACCAACAGAGTCAACTAACCCGGACCCTTGGGCTCTCAGAGTCTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCAACAGAGTCAACTAACCCGGACCCTTGGGCTCTCAGAGTCTGAA  350

seq1  CCCCCAACCAAAGAACATACACAGGCTAGACCTAGTCCTCCCTGCATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAACCAAAGAACATACACAGGCTAGACCTAGTCCTCCCTGCATATA  400

seq1  TGTAGCAGATGTGCAGCTCGGCCTTCATGTGGGTCCCAAACATCTGGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCAGATGTGCAGCTCGGCCTTCATGTGGGTCCCAAACATCTGGAAC  450

seq1  AGGGGCTATCTTAAAAGCTGTTCCCTGTACATGGGATATGTTCTACTAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCTATCTTAAAAGCTGTTCCCTGTACATGGGATATGTTCTACTAGC  500

seq1  TGGGCTGCCTTGTCTGGCCTCAGTGGGAGAGGAAGTGCCTAGCCTCACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTGCCTTGTCTGGCCTCAGTGGGAGAGGAAGTGCCTAGCCTCACAG  550

seq1  AGACTTGAAGTGCCAGGGTTGGGTGGGGTGTGGGTGGGG  589
      |||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGAAGTGCCAGGGTTGGGTGGGGTGTGGGTGGGG  589