BAC Information

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BAC

Clone NameB6Ng01-084H15
Chromosome2 (Build37)
Map Location 82,053,175 - 82,054,361
singlet/doubletsinglet
Overlap geneZfp804a
Upstream geneLOC100040704
Downstream geneLOC100041308, A130030D18Rik, EG624362, LOC433550, LOC269292, LOC433440, Fsip2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084H15.bB6Ng01-084H15.g
ACCDH898421DH898422
length7861,159
definitionDH898421|Mus musculus domesticus DNA, BAC clone: B6Ng01-084H15, 5' end.DH898422|Mus musculus domesticus DNA, BAC clone: B6Ng01-084H15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgaaattcttaggcaaatggatggatctgaaagatatcgtcct
gagtgaggtaatccaatcacaaaagaacacgcatgatatgcacacactga
taagtggatattagcccagaaacttagaatatccaagatacaatttacaa
aaaacatgaaccccaagaagaaggaagtccaaagtatggatactttgctc
cttcttagaatgggaaacaaaatacccatggaaggaattacagagataaa
gattggagctgagatggaagaaaagaccatccagagactgccccacctgg
ggatccaacacatattcaaccaccaagcccagatactactgcatatgcca
gaaagattttgctgaccagaccctgacatagctttctcttgtgagtctat
gccaatgcctggcaaatacagaattggattctcataataatctattggat
ggaacacagggaccctaatgaaggagctagagaaagtacccaaggagtta
aagaggtctgcaaccctataggaggaataacgatatgaactaaccagtgc
tccccagagctgtttctctagttgtttgtttagcagaggatggcctagtg
ggacatcaatgggaggagaggcccttggtattgtgaagatcaggagaatg
ccacggccaggaagcatgagtgtgtgggttggggagcagggtgggggaga
ggttataggggggcttttgggggatagcattttaaatttaaattaaaaat
atatctcacaaaaatcttttatagaacacccttggt

gaattctgtgttcctatgtcaacctccagagctctttggataaatggctg
attttagaactaaggaaataaacacaaagatgtgtttaaaagtccatggt
acagtaagaagtaagaaaatatttttaaaatgatagggcatgccagaaat
aaatagaagcctgtttgataggtgtcatgctggctaaactgtagaaaaaa
ttagcattaaatgaacactatttgaaagagagggtgagataaaataggtt
tctatggatattttgtaatgtagatatataagtagataaatatagaatat
gtaaacaatactttgtaacatattatgatgaaatttaaatgaagagaaaa
ttatagaattggaaaaacatgccagtgtgaaaacattatcctcacagttg
attcaggcaaagacatttaattaatacttatattttaataaaatgatgct
ttcttgatatttcaaaatattctatattatacataggtgccgggaaggca
caatttactgaggtaatcaaagttaatatacagcttattgaaaaatggct
tcttgtgcttttagataaaattcatagaaaaggcacttcagcttatatga
cagcctgcatttctactgaaagaaaatcatcataaacgaacaaacaataa
agtagaaaattgtaaaaacaaaatgatattgttatttagagctataggca
actctcaattgcaggtatataaattttagtccactgttaaaatgataata
tttatatataataagttgagaggttatagtagctgctgtacaataactcc
accaccacatgaagctagtatagcaaataagtacaatgtttttttaaact
tctctttctcactactaatctatatttcttactaacataaagaaacatat
caataggaaatcactagtgttaggaatagcatgaaatggcaatcaagatt
aatacaaaatcacagcaaaggtccatgtcatgcatattaatacagagaga
tacctacagaaaattattgatcaatctcattttttaaacacagagatgag
ctcttagcacagttgggagttatatctgagtagcaacatgagtattcctc
gagttttgctagtcactattcttgactttattactcatgattgcatgctg
aatgagttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_82053175_82054361
seq2: B6Ng01-084H15.g_67_1225 (reverse)

seq1  GAACATCATTCCAGCCATGCAATTCATGAGTAATAAGGTCAAGAATAGTT  50
      |||| ||||| ||| ||||||| ||||||||||||| ||||||||||| |
seq2  GAAC-TCATT-CAG-CATGCAA-TCATGAGTAATAAAGTCAAGAATAG-T  45

seq1  GACTTAGCCAAAACTCTGAGAATAACTTCCATGTTGCTACCTCAGGATAT  100
      ||| ||| |||||||| ||| |  |||  |||||||||| |||| |||||
seq2  GAC-TAG-CAAAACTC-GAGGAATACT--CATGTTGCTA-CTCA-GATAT  88

seq1  AAACTCCCAACTGTTGCTAAGAGCTTCATCCTCTGTGTTTTATAAAATGA  150
       |||||||||||| |||||||||| |||| ||||||| |||| |||||||
seq2  -AACTCCCAACTG-TGCTAAGAGC-TCAT-CTCTGTG-TTTAAAAAATGA  133

seq1  GATTGATTCAATAAATTTTCTGTAGGTATTTTTCTTCTGTTATTTTATAT  200
      |||||| ||||| |||||||||||||||| |    |||||   || ||| 
seq2  GATTGA-TCAAT-AATTTTCTGTAGGTATCT---CTCTGT--ATTAATA-  175

seq1  TGCATGACATGGACCCTTTGCTGTGATTTTTGTATTATTCTTGATTGCCA  250
      ||||||||||||| |||||||||||| |||||||||| ||||||||||||
seq2  TGCATGACATGGA-CCTTTGCTGTGA-TTTTGTATTAATCTTGATTGCCA  223

seq1  TTTCATTGCTATTCCTAACACTAGTGATTTCCTATTGATATGTTTCTTTA  300
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCA-TGCTATTCCTAACACTAGTGATTTCCTATTGATATGTTTCTTTA  272

seq1  TGTTAGTAAGAAATATAGATTAGTAGTGAGAAAGAGAAGTTTAAAAAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGTAAGAAATATAGATTAGTAGTGAGAAAGAGAAGTTTAAAAAAAC  322

seq1  ATTGTACTTATTTGCTATACTAGCTTCATGTGGTGGTGGAGTTATTGTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTACTTATTTGCTATACTAGCTTCATGTGGTGGTGGAGTTATTGTAC  372

seq1  AGCAGCTACTATAACCTCTCAACTTATTATATATAAATATTATCATTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTACTATAACCTCTCAACTTATTATATATAAATATTATCATTTTA  422

seq1  ACAGTGGACTAAAATTTATATACCTGCAATTGAGAGTTGCCTATAGCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGACTAAAATTTATATACCTGCAATTGAGAGTTGCCTATAGCTCT  472

seq1  AAATAACAATATCATTTTGTTTTTACAATTTTCTACTTTATTGTTTGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACAATATCATTTTGTTTTTACAATTTTCTACTTTATTGTTTGTTC  522

seq1  GTTTATGATGATTTTCTTTCAGTAGAAATGCAGGCTGTCATATAAGCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATGATGATTTTCTTTCAGTAGAAATGCAGGCTGTCATATAAGCTGA  572

seq1  AGTGCCTTTTCTATGAATTTTATCTAAAAGCACAAGAAGCCATTTTTCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTTTTCTATGAATTTTATCTAAAAGCACAAGAAGCCATTTTTCAA  622

seq1  TAAGCTGTATATTAACTTTGATTACCTCAGTAAATTGTGCCTTCCCGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGTATATTAACTTTGATTACCTCAGTAAATTGTGCCTTCCCGGCA  672

seq1  CCTATGTATAATATAGAATATTTTGAAATATCAAGAAAGCATCATTTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGTATAATATAGAATATTTTGAAATATCAAGAAAGCATCATTTTAT  722

seq1  TAAAATATAAGTATTAATTAAATGTCTTTGCCTGAATCAACTGTGAGGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATAAGTATTAATTAAATGTCTTTGCCTGAATCAACTGTGAGGAT  772

seq1  AATGTTTTCACACTGGCATGTTTTTCCAATTCTATAATTTTCTCTTCATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTTCACACTGGCATGTTTTTCCAATTCTATAATTTTCTCTTCATT  822

seq1  TAAATTTCATCATAATATGTTACAAAGTATTGTTTACATATTCTATATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTCATCATAATATGTTACAAAGTATTGTTTACATATTCTATATTT  872

seq1  ATCTACTTATATATCTACATTACAAAATATCCATAGAAACCTATTTTATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTTATATATCTACATTACAAAATATCCATAGAAACCTATTTTATC  922

seq1  TCACCCTCTCTTTCAAATAGTGTTCATTTAATGCTAATTTTTTCTACAGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCTCTCTTTCAAATAGTGTTCATTTAATGCTAATTTTTTCTACAGT  972

seq1  TTAGCCAGCATGACACCTATCAAACAGGCTTCTATTTATTTCTGGCATGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCAGCATGACACCTATCAAACAGGCTTCTATTTATTTCTGGCATGC  1022

seq1  CCTATCATTTTAAAAATATTTTCTTACTTCTTACTGTACCATGGACTTTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCATTTTAAAAATATTTTCTTACTTCTTACTGTACCATGGACTTTT  1072

seq1  AAACACATCTTTGTGTTTATTTCCTTAGTTCTAAAATCAGCCATTTATCC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACATCTTTGTGTTTATTTCCTTAGTTCTAAAATCAGCCATTTATCC  1122

seq1  AAAGAGCTCTGGAGGTTGACATAGGAACACAGAATTC  1187
      |||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCTCTGGAGGTTGACATAGGAACACAGAATTC  1159


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