BAC Information

Click to search

BAC

Clone NameB6Ng01-084I14
Chromosome2 (Build37)
Map Location 17,266,536 - 17,436,124
singlet/doubletdoublet
Overlap geneNebl
Upstream genePlxdc2, 4930515L03Rik, LOC383665
Downstream geneLOC100041319, LOC100041047, 1700113O17Rik, A930004D18Rik, 2810030E01Rik, Mllt10, LOC641254, Dnajc1, LOC100041388, LOC623325
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084I14.bB6Ng01-084I14.g
ACCDH898463DH898464
length1,255462
definitionDH898463|Mus musculus domesticus DNA, BAC clone: B6Ng01-084I14, 5' end.DH898464|Mus musculus domesticus DNA, BAC clone: B6Ng01-084I14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(17,266,536 - 17,267,813)(17,435,657 - 17,436,124)
sequence
gaattcagtctcataatatagctagtctgtctcaccataattattttaaa
ccccaaacctaaacttaatgcctatatatctcaactatatataaatccac
aaaaaaacttctcagaaaattgaataagtcagcattttctagtattataa
acctttagaaggaaaatacaactagctaccacctgtagtatctttctttc
aagggtatcccacttctcaccacaaaaatattgatcatgtatcataaaat
attactatagaatatgcagaagcttgcttgcttgcttggtttcctttcta
agaccataatgataaacaagcataatcaaaaaggcacctattttgtatat
atttatattgtaaccttagtataaactgcatctactgaatatagggctgt
attattaaagatcaattattttctttctcatttgactgaaaacattccac
tggaggtggatgaacctgaaaagtaggtgtgtcacttgctctcaattatg
gaaaaggttttcccctaattcctatagtgttataggcctccagcagagag
aagatccctaactaaaaacatcttcatcatcttcaagcaaaggacctagt
agcaagagagaaactggactaatctcatccatcccccttacaagatgctt
gtagaaattgtgcttagacattcctgggtgctgtgtggaggctgggagac
atgggaagaggcagagcctccatggaaaatgaaaaccagatcaaagttgc
aaactgggctgtgctgcagatgtgcaagcaaaatgaagataggaagatat
tttgtcacatgctagaaagaaaaagctttctagataacaaatgctttttt
tcttaaatctactacaaaagcttatagcaaaagcattatatcaagtttct
aaactttttctcaagaggactatgaaccaaaggcattgttttcagagact
ttgagaagtgtatcaagtaccttcttgtgctcctggcaagcttggatcca
tcagataggaagagtgcgtgccctctgtgcttggcatttagtctcctttg
actcaattctagggcttgttcttaattcttttattgctgtcatgtacatg
ttgaaatatgactgcaaacctgcccgttgggaggaggcatgtgaaagcga
aaaggtgcctaagaaataagtatttctaaagatgcgtgcggaatgccctg
cagaactctagctcgacgacatatctcgaagcatgccatatattgtcctg
ccttg
acatctcacattctgtccccaggctttatgccagtggtcagaaacacgaa
atactaagcaagaggcagggctgacgctgaaattatttacagtactccta
aacttgattccattgctgtttgtgcttttagggttagactggaactaata
aaacattataaattctgcagagaccacagtgtttcagtaaaggaataaat
ttaaaaatcatggagaatgatgagaaactctaaagcgtgagtaaaccact
gatatgaaatcagggtgtgctgagttgctgtggtcgtgtaggtgcgtctg
gtggactctattttgaggcccttccctgacttacatacggagtgtgttct
cagtatgcccatgaagccaccatcccatctgctccccacattattcccat
ttgtctcctgagaccttgtgtatctctgtgtatatgtatattgtggggag
ggtggtttagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_17266536_17267813
seq2: B6Ng01-084I14.b_47_1301

seq1  GAATTCAGTCTCATAATATAGCTAGTCTGTCTCACCATAATTATTTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCTCATAATATAGCTAGTCTGTCTCACCATAATTATTTTAAA  50

seq1  CCCCAAACCTAAACTTAATGCCTATATATCTCAACTATATATAAATCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAACCTAAACTTAATGCCTATATATCTCAACTATATATAAATCCAC  100

seq1  AAAAAAACTTCTCAGAAAATTGAATAAGTCAGCATTTTCTAGTATTATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACTTCTCAGAAAATTGAATAAGTCAGCATTTTCTAGTATTATAA  150

seq1  ACCTTTAGAAGGAAAATACAACTAGCTACCACCTGTAGTATCTTTCTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTAGAAGGAAAATACAACTAGCTACCACCTGTAGTATCTTTCTTTC  200

seq1  AAGGGTATCCCACTTCTCACCACAAAAATATTGATCATGTATCATAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTATCCCACTTCTCACCACAAAAATATTGATCATGTATCATAAAAT  250

seq1  ATTACTATAGAATATGCAGAAGCTTGCTTGCTTGCTTGGTTTCCTTTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTATAGAATATGCAGAAGCTTGCTTGCTTGCTTGGTTTCCTTTCTA  300

seq1  AGACCATAATGATAAACAAGCATAATCAAAAAGGCACCTATTTTGTATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCATAATGATAAACAAGCATAATCAAAAAGGCACCTATTTTGTATAT  350

seq1  ATTTATATTGTAACCTTAGTATAAACTGCATCTACTGAATATAGGGCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATATTGTAACCTTAGTATAAACTGCATCTACTGAATATAGGGCTGT  400

seq1  ATTATTAAAGATCAATTATTTTCTTTCTCATTTGACTGAAAACATTCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAAAGATCAATTATTTTCTTTCTCATTTGACTGAAAACATTCCAC  450

seq1  TGGAGGTGGATGAACCTGAAAAGTAGGTGTGTCACTTGCTCTCAATTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTGGATGAACCTGAAAAGTAGGTGTGTCACTTGCTCTCAATTATG  500

seq1  GAAAAGGTTTTCCCCTAATTCCTATAGTGTTATAGGCCTCCAGCAGAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGTTTTCCCCTAATTCCTATAGTGTTATAGGCCTCCAGCAGAGAG  550

seq1  AAGATCCCTAACTAAAAACATCTTCATCATCTTCAAGCAAAGGACCTAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCCCTAACTAAAAACATCTTCATCATCTTCAAGCAAAGGACCTAGT  600

seq1  AGCAAGAGAGAAACTGGACTAATCTCATCCATCCCCCTTACAAGATGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGAGAGAAACTGGACTAATCTCATCCATCCCCCTTACAAGATGCTT  650

seq1  GTAGAAATTGTGCTTAGACATTCCTGGGTGCTGTGTGGAGGCTGGGAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAATTGTGCTTAGACATTCCTGGGTGCTGTGTGGAGGCTGGGAGAC  700

seq1  ATGGGAAGAGGCAGAGCCTCCATGGAAAATGAAAACCAGATCAAAGTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAGAGGCAGAGCCTCCATGGAAAATGAAAACCAGATCAAAGTTGC  750

seq1  AAACTGGGCTGTGCTGCAGATGTGCAAGCAAAATGAAGATAGGAAGATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGGCTGTGCTGCAGATGTGCAAGCAAAATGAAGATAGGAAGATAT  800

seq1  TTTGTCACAGGCTAGAAAGAAAAAGCTTTCTAGATAACAAATGCTTTTTT  850
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCACATGCTAGAAAGAAAAAGCTTTCTAGATAACAAATGCTTTTTT  850

seq1  TCTTAAATCTACTACAAAAGCTTATAGCAAAAGCATTATATCAAGTTTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAATCTACTACAAAAGCTTATAGCAAAAGCATTATATCAAGTTTCT  900

seq1  AAAC-TTTTCTCAAGAGGACTATGAACCAAAGGCATTTGTTTTCAGAGAC  949
      |||| |||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAACTTTTTCTCAAGAGGACTATGAACCAAAGGCA-TTGTTTTCAGAGAC  949

seq1  TTTGAGAAGTGTATCAAGTACCTTCTTGTGCTCCTGGCAAGCTTGGAATC  999
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTTGAGAAGTGTATCAAGTACCTTCTTGTGCTCCTGGCAAGCTTGG-ATC  998

seq1  CATCAGATAGGAAGAGGTGCGTGCCCTCTGTGCTTGGCATTTAGTCTCCT  1049
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CATCAGATAGGAAGA-GTGCGTGCCCTCTGTGCTTGGCATTTAGTCTCCT  1047

seq1  TTGACTCCAATTTCTAAGGGGCTTGTTCTTAAATTCTTCTATTGCTGTCA  1099
      |||||||  | |||||  |||||||||||| ||||||| |||||||||| 
seq2  TTGACTC--AATTCTA--GGGCTTGTTCTT-AATTCTTTTATTGCTGTC-  1091

seq1  ATGTTACATG-TGACATATTGACTGCCAAACTGCACGTGGGAGGGAGGCA  1148
      ||| |||||| ||| ||| ||||||| || |||| ||| ||  |||||||
seq2  ATG-TACATGTTGAAATA-TGACTGCAAACCTGCCCGTTGGGAGGAGGCA  1139

seq1  TGTGGAAAGCGAAAAAGGTG-CTAAGAATATAGTATTTCTTAAAAAGATG  1197
      ||| ||||||| |||||||| |||||||   |||||||||   |||||||
seq2  TGT-GAAAGCG-AAAAGGTGCCTAAGAAATAAGTATTTCT---AAAGATG  1184

seq1  C-TGCAAAAGATGGCACCTGGCTATGACACATCTAGGCTCGACG-CATAA  1245
      | |||  |  |||   ||||      | |  |||| |||||||| ||| |
seq2  CGTGCGGA--ATG--CCCTG-----CAGAACTCTA-GCTCGACGACAT-A  1223

seq1  TCTCGAAAGCATGCCATATATTGCTCTGCCTTG  1278
      ||||| |||||||||||||||||  ||||||||
seq2  TCTCG-AAGCATGCCATATATTGTCCTGCCTTG  1255

seq1: chr2_17435657_17436124
seq2: B6Ng01-084I14.g_71_538 (reverse)

seq1  TACTAAACCACCCTCCCCACAATATACATATACACAGAGATACACAAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAACCACCCTCCCCACAATATACATATACACAGAGATACACAAGGT  50

seq1  CTCAGGAGACAAATGGGAATAATGTGGGGAGCAGATGGGATGGTGGCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGAGACAAATGGGAATAATGTGGGGAGCAGATGGGATGGTGGCTTC  100

seq1  ATGGGCATACTGAGAACACACTCCGTATGTAAGTCAGGGAAGGGCCTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCATACTGAGAACACACTCCGTATGTAAGTCAGGGAAGGGCCTCAA  150

seq1  AATAGAGTCCACCAGACGCACCTACACGACCACAGCAACTCAGCACACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGTCCACCAGACGCACCTACACGACCACAGCAACTCAGCACACCC  200

seq1  TGATTTCATATCAGTGGTTTACTCACGCTTTAGAGTTTCTCATCATTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCATATCAGTGGTTTACTCACGCTTTAGAGTTTCTCATCATTCTC  250

seq1  CATGATTTTTAAATTTATTCCTTTACTGAAACACTGTGGTCTCTGCAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTTTTAAATTTATTCCTTTACTGAAACACTGTGGTCTCTGCAGAA  300

seq1  TTTATAATGTTTTATTAGTTCCAGTCTAACCCTAAAAGCACAAACAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAATGTTTTATTAGTTCCAGTCTAACCCTAAAAGCACAAACAGCAA  350

seq1  TGGAATCAAGTTTAGGAGTACTGTAAATAATTTCAGCGTCAGCCCTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATCAAGTTTAGGAGTACTGTAAATAATTTCAGCGTCAGCCCTGCCT  400

seq1  CTTGCTTAGTATTTCGTGTTTCTGACCACTGGCATAAAGCCTGGGGACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTAGTATTTCGTGTTTCTGACCACTGGCATAAAGCCTGGGGACAG  450

seq1  AATGTGAGATGTGAATTC  468
      ||||||||||||||||||
seq2  AATGTGAGATGTGAATTC  468