BAC Information

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BAC

Clone NameB6Ng01-085F16
Chromosome2 (Build37)
Map Location 62,199,649 - 62,344,400
singlet/doubletdoublet
Overlap geneDpp4, Gcg, Fap
Upstream geneTank, Psmd14, Tbr1, LOC100039274, Slc4a10
Downstream geneIfih1, Gca, Kcnh7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085F16.bB6Ng01-085F16.g
ACCDH899048DH899049
length1,1141,168
definitionDH899048|Mus musculus domesticus DNA, BAC clone: B6Ng01-085F16, 5' end.DH899049|Mus musculus domesticus DNA, BAC clone: B6Ng01-085F16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,199,649 - 62,200,777)(62,343,217 - 62,344,400)
sequence
gaattcatttatgaagcaagctgaggcgtgcagtacactttgtgttctca
ttacagagtgcttaggcacaatcccctctctagacccatgttcacagcct
tatctttttaatacatttccctgtttcccctggatggagttgtgcctagt
agaaatgtgtgaaaactggcatctgtctggttaaatacagagaggaaaaa
acatattttttttcagagagtcgtgaggaagtgtagcgtgtctcttgcca
tggaggaaaccacttttcttgttggcaaacctctctcctctgcccaatca
gtgcctggaaaaaaaggacatgggaatgttgtggtagctcccagcccagc
agagaggggtcttcgtcttcctggactgaagcctcacctctctcacccgg
aagatgggaagtggttacagtctttgcttcacttcgttacccttttaaaa
aagctacgtaccgccgtccagttttcatcttccccataaggtgtcatggt
ggctggagtccctccccctgaccccgtgctttcttccacagtctcagact
tgagtctgaggtgctgtgcatatacatgtgtcaggtggtggtgagcaggg
cagtgggtctctgagggtcaccttgctttcccagataaagtgcatcctca
gagtgcctaccaacatgcgctttcctccagagaggtgagcaatggacatt
attgaattggtactgttcctgatggctgccatccaggctggactgaaacc
ctttttctgcctccaaagcggagaactcaaacaacaggtcaagcaagtat
gttctgcatcttggcagcctttcagctcactggaagctccagttgcctgg
agatcacgctttgctcgtcagttctgctcatgactttggtgtcggacttg
tctcttcgccttcttgggtgtacagtaggaagcacagctaacactgagac
acgacctgactcacgtttcatcagtgacagcacagtgccttagtatagac
agccacacattaaccgctctgagtagcagcatgatgtctataaatctata
ctcagacactactcttcgaccagctgtgtactcattcacatgctgctgct
ctggggaggaaaga
gaattctcttggccaatctgctctgtgggcacatttcttacagcagcctc
ccactccgccgaggatccccactcaggagagagcagaaaaagtcaatgct
ggttcttttctagccctcttcatttctacaataggaatcgcttttccagg
atgcctggggatttaaagtcgaacctcgtgctgtgccatggatgcagtat
gattttgctattaccaacttctagataatatttgcatcctatctcaaaac
agaaaaaaatatatatgtatgtatgtttgaacccagtgctgtaactaatc
cctgagttggtatatattaataatgtgtgaggttttgaatacagatgttt
gaggagatcttaatatgtactaggaatcacaatgtcctatcatgtattct
cttctcggaaacatggagagcagagggcataccaaatattattttagtaa
atgctccttttcctgtaaaatcatgaacaacggaggccttaggttcactc
tgctctcttttgaaaatgaaattaaagaggaagggaaaccttgccatcca
ggaacacttcttgctgtcctactaattaaagcagattattttcatgagtg
aaatttgaaatcatgtagacaatttcacttaccacaatgattttcgaacc
caaatgttccttctgcttttaaaaaaatctatttttccctattaaaacct
agtttagttctcctccaaatataagaaaaagaggccacagtataattgga
gcagcctattttattctgtggtttgcagccaagggccctcaataaaattc
cccagagatggaaaaataaaaccataaagtacttagaggattcttcactc
aaggaaaaacaccacagaattccttccactcctcatacttcatgagtttt
aagagtgggcctgcttgcacctttctgctcttctcttctctgccttctct
tcttgcactgcccctatccctcctaaagataccaacactttctcgtttgg
ctctatgacagactccccaaactgcccataactattacagcaacaactgc
aggcattgttaggactcataaaatgggaaagctgtagcttcatgtccacc
ctcacgggactgctgagtgctagaaagcactcttacagttggaacatccc
tttttctgtgcatctctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_62199649_62200777
seq2: B6Ng01-085F16.b_47_1160

seq1  GAATTCATTTATGAAGCAAGCTGAGGCGTGCAGTACACTTTGTGTTCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTATGAAGCAAGCTGAGGCGTGCAGTACACTTTGTGTTCTCA  50

seq1  TTACAGAGTGCTTAGGCACAATCCCCTCTCTAGACCCATGTTCACAGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAGTGCTTAGGCACAATCCCCTCTCTAGACCCATGTTCACAGCCT  100

seq1  TATCTTTTTAATACATTTCCCTGTTTCCCCTGGATGGAGTTGTGCCTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTTTAATACATTTCCCTGTTTCCCCTGGATGGAGTTGTGCCTAGT  150

seq1  AGAAATGTGTGAAAACTGGCATCTGTCTGGTTAAATACAGAGAGGAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGTGTGAAAACTGGCATCTGTCTGGTTAAATACAGAGAGGAAAAA  200

seq1  ACATATTTTTTTTCAGAGAGTCGTGAGGAAGTGTAGCGTGTCTCTTGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTTTTTTTCAGAGAGTCGTGAGGAAGTGTAGCGTGTCTCTTGCCA  250

seq1  TGGAGGAAACCACTTTTCTTGTTGGCAAACCTCTCTCCTCTGCCCAATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAAACCACTTTTCTTGTTGGCAAACCTCTCTCCTCTGCCCAATCA  300

seq1  GTGCCTGGAAAAAAAGGACATGGGAATGTTGTGGTAGCTCCCAGCCCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTGGAAAAAAAGGACATGGGAATGTTGTGGTAGCTCCCAGCCCAGC  350

seq1  AGAGAGGGGTCTTCGTCTTCCTGGACTGAAGCCTCACCTCTCTCACCCGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGGGTCTTCGTCTTCCTGGACTGAAGCCTCACCTCTCTCACCCGG  400

seq1  AAGATGGGAAGTGGTTACAGTCTTTGCTTCACTTCGTTACCCTTTTAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGGAAGTGGTTACAGTCTTTGCTTCACTTCGTTACCCTTTTAAAA  450

seq1  AAGCTACGTACCGCCGTCCAGTTTTCATCTTCCCCATAAGGTGTCATGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTACGTACCGCCGTCCAGTTTTCATCTTCCCCATAAGGTGTCATGGT  500

seq1  GGCTGGAGTCCCTCCCCCTGACCCCGTGCTTTCTTCCACAGTCTCAGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGAGTCCCTCCCCCTGACCCCGTGCTTTCTTCCACAGTCTCAGACT  550

seq1  TGAGTCTGAGGTGCTGTGCATATACATGTGTCAGGTGGTGGTGAGCAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTGAGGTGCTGTGCATATACATGTGTCAGGTGGTGGTGAGCAGGG  600

seq1  CAGTGGGTCTCTGAGGGTCACCTTGCTTTCCCAGATAAAGTGCATCCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGTCTCTGAGGGTCACCTTGCTTTCCCAGATAAAGTGCATCCTCA  650

seq1  GAGTGCCTACCAACATGCGCTTTCCTCCAGAGAGGTGAGCAATGGACATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCCTACCAACATGCGCTTTCCTCCAGAGAGGTGAGCAATGGACATT  700

seq1  ATTGAATTGGTACTGTTCCTGATGGCTGCCATCCAGGCTGGACTGAAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATTGGTACTGTTCCTGATGGCTGCCATCCAGGCTGGACTGAAACC  750

seq1  CTTTTTCTGCCTCCAAAGCGGAGAACTCAAACAACAGGTCAAGCAAGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCTGCCTCCAAAGCGGAGAACTCAAACAACAGGTCAAGCAAGTAT  800

seq1  GTTCTGCATCTTGGCAGCCTTTCAGCTCACTGGAAGCTCCAGTTGCCTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGCATCTTGGCAGCCTTTCAGCTCACTGGAAGCTCCAGTTGCCTGG  850

seq1  AGATCACGCTTTGCTCGTCAGTTCTGCTCATGACTTTGGTGTCGGACTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCACGCTTTGCTCGTCAGTTCTGCTCATGACTTTGGTGTCGGACTTG  900

seq1  TCTCTTCGCCTTCTTGGGTGTACAGTAGGAAGCACAGCTAACACTGAGAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCGCCTTCTTGGGTGTACAGTAGGAAGCACAGCTAACACTGAGAC  950

seq1  ACGACCTGACTCACGTTTCCATCAGTGACAGCACAGTGCCTTAGTATAGG  1000
      |||||||||||||||||| ||||||||||||||||||||||||||||| |
seq2  ACGACCTGACTCACGTTT-CATCAGTGACAGCACAGTGCCTTAGTATA-G  998

seq1  ACAGCCACACATTAACCGGCTCTGAGTAGCAGGCATGATGTCTATAAAAT  1050
      ||||||||||||||||| ||||||||||||| ||||||||||||| ||||
seq2  ACAGCCACACATTAACC-GCTCTGAGTAGCA-GCATGATGTCTAT-AAAT  1045

seq1  CTATAACTCAGGACACTTACTCTTCCGACCCAGCCTGTGGTACTCATTTC  1100
      |||| ||||| ||||| ||||||| ||| |||| |||| |||||||||  
seq2  CTAT-ACTCA-GACAC-TACTCTT-CGA-CCAG-CTGT-GTACTCATT--  1086

seq1  AACATGCTGCTGCTCCTGGGGAGAAAAGA  1129
       ||||||||||||| |||||||| |||||
seq2  CACATGCTGCTGCT-CTGGGGAGGAAAGA  1114

seq1: chr2_62343217_62344400
seq2: B6Ng01-085F16.g_70_1237 (reverse)

seq1  AAGAGATGCACAGAAAAAGGGAATTGTTTCCAAACTGTAAGA-TGCTTTC  49
      ||||||||||||||||||||||  ||||  | |||||||||| |||||||
seq2  AAGAGATGCACAGAAAAAGGGA--TGTT--CCAACTGTAAGAGTGCTTTC  46

seq1  TAGCACTCAGGGCAGTCCCGTGA-GGTGGACACTGAAGCTACAGCTTTCC  98
      |||||||||  |||||||||||| |||||||| ||||||||||||||| |
seq2  TAGCACTCA--GCAGTCCCGTGAGGGTGGACA-TGAAGCTACAGCTTT-C  92

seq1  CCATTTTATGAGT-CTGAC-ATGGCTGCAGTTGTTTGCTGTATAGGTTAT  146
      ||||||||||||| || || ||| ||||||||| ||||||||   |||||
seq2  CCATTTTATGAGTCCTAACAATGCCTGCAGTTG-TTGCTGTAATAGTTAT  141

seq1  GGGCAGTTTTGGGGAGTCTTGTCATAGGAGCCCAAACGAAGAAAAGTTGT  196
      |||||| ||||||||||| ||||||| ||| ||||||| |||||   |||
seq2  GGGCAG-TTTGGGGAGTC-TGTCATA-GAG-CCAAACG-AGAAA--GTGT  184

seq1  TGGTATCTTTAAGGAGGGATAGGGGCAGTGCAAGGAAGAGGAAGGCAGAG  246
      |||||||||| |||||||||||||||||||||| ||||| ||||||||||
seq2  TGGTATCTTT-AGGAGGGATAGGGGCAGTGCAA-GAAGA-GAAGGCAGAG  231

seq1  AAGGAGAAGAGCAGAAAGGTGCAAGCAGGCCCACTCTTAAAACTCATGAA  296
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AA-GAGAAGAGCAGAAAGGTGCAAGCAGGCCCACTCTTAAAACTCATGAA  280

seq1  GTATGAGGAGTGGAAGGAATTCTGTGGTGTTTTTCCTTGAGTGAAGAATC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAGGAGTGGAAGGAATTCTGTGGTGTTTTTCCTTGAGTGAAGAATC  330

seq1  CTCTAAGTACTTTATGGTTTTATTTTTCCATCTCTGGGGAATTTTATTGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAGTACTTTATGGTTTTATTTTTCCATCTCTGGGGAATTTTATTGA  380

seq1  GGGCCCTTGGCTGCAAACCACAGAATAAAATAGGCTGCTCCAATTATACT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCTTGGCTGCAAACCACAGAATAAAATAGGCTGCTCCAATTATACT  430

seq1  GTGGCCTCTTTTTCTTATATTTGGAGGAGAACTAAACTAGGTTTTAATAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCTCTTTTTCTTATATTTGGAGGAGAACTAAACTAGGTTTTAATAG  480

seq1  GGAAAAATAGATTTTTTTAAAAGCAGAAGGAACATTTGGGTTCGAAAATC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAATAGATTTTTTTAAAAGCAGAAGGAACATTTGGGTTCGAAAATC  530

seq1  ATTGTGGTAAGTGAAATTGTCTACATGATTTCAAATTTCACTCATGAAAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGGTAAGTGAAATTGTCTACATGATTTCAAATTTCACTCATGAAAA  580

seq1  TAATCTGCTTTAATTAGTAGGACAGCAAGAAGTGTTCCTGGATGGCAAGG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTGCTTTAATTAGTAGGACAGCAAGAAGTGTTCCTGGATGGCAAGG  630

seq1  TTTCCCTTCCTCTTTAATTTCATTTTCAAAAGAGAGCAGAGTGAACCTAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTTCCTCTTTAATTTCATTTTCAAAAGAGAGCAGAGTGAACCTAA  680

seq1  GGCCTCCGTTGTTCATGATTTTACAGGAAAAGGAGCATTTACTAAAATAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCCGTTGTTCATGATTTTACAGGAAAAGGAGCATTTACTAAAATAA  730

seq1  TATTTGGTATGCCCTCTGCTCTCCATGTTTCCGAGAAGAGAATACATGAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGTATGCCCTCTGCTCTCCATGTTTCCGAGAAGAGAATACATGAT  780

seq1  AGGACATTGTGATTCCTAGTACATATTAAGATCTCCTCAAACATCTGTAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATTGTGATTCCTAGTACATATTAAGATCTCCTCAAACATCTGTAT  830

seq1  TCAAAACCTCACACATTATTAATATATACCAACTCAGGGATTAGTTACAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACCTCACACATTATTAATATATACCAACTCAGGGATTAGTTACAG  880

seq1  CACTGGGTTCAAACATACATACATATATATTTTTTTCTGTTTTGAGATAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGTTCAAACATACATACATATATATTTTTTTCTGTTTTGAGATAG  930

seq1  GATGCAAATATTATCTAGAAGTTGGTAATAGCAAAATCATACTGCATCCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAAATATTATCTAGAAGTTGGTAATAGCAAAATCATACTGCATCCA  980

seq1  TGGCACAGCACGAGGTTCGACTTTAAATCCCCAGGCATCCTGGAAAAGCG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACAGCACGAGGTTCGACTTTAAATCCCCAGGCATCCTGGAAAAGCG  1030

seq1  ATTCCTATTGTAGAAATGAAGAGGGCTAGAAAAGAACCAGCATTGACTTT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTATTGTAGAAATGAAGAGGGCTAGAAAAGAACCAGCATTGACTTT  1080

seq1  TTCTGCTCTCTCCTGAGTGGGGATCCTCGGCGGAGTGGGAGGCTGCTGTA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTCTCTCCTGAGTGGGGATCCTCGGCGGAGTGGGAGGCTGCTGTA  1130

seq1  AGAAATGTGCCCACAGAGCAGATTGGCCAAGAGAATTC  1184
      ||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGTGCCCACAGAGCAGATTGGCCAAGAGAATTC  1168