BAC Information

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BAC

Clone NameB6Ng01-085M15
Chromosome2 (Build37)
Map Location 142,773,325 - 142,773,863
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085M15.bB6Ng01-085M15.g
ACCDH899360DH899361
length9231,181
definitionDH899360|Mus musculus domesticus DNA, BAC clone: B6Ng01-085M15, 5' end.DH899361|Mus musculus domesticus DNA, BAC clone: B6Ng01-085M15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgtgccccatttattaaaatatagttatttga
ttttctggagtccagcttcttgagttctttgtatatattggatattagtc
ccctattggatttaggattggtaaagatcctttcccaatctgttaggttg
cctttttgtcttattgatagtgtcttttgccttacagaagctttgccatt
ttatgaagtcccatttgtattaaggaaaagtaattgttgcttcctgttat
ttttgttgttagagtttagattctgttcttgtggctatcttctcttaggt
ttcttgaaggattacttccttgctctttctagggcataatttccgtcctt
gtgttggagttttacctttattatcctttgaagggctggattcatggaaa
gattttgtgtgaatttggttttgtcatggaatactttggttttatccatc
tatggtaattgagagttttgctgggtatagtagccagggctgacatttgt
gttctcttagggtctgtatagcatctgtccaggatcttctggcttccata
gtctctgttgagaagtctggtgtaattctaataggtctgcctttatatgt
tacttgacgtttttcccttactgcttttaatattctatctttatttagtg
catttgttattctgattattatgtgtaaagaggattgtcctttttggtcc
agtctatttggagttctgtaggcttcttgtatattcatgggcatctcttt
ctttaggtaggggaagtttttttctataattttgttgaagatatttactg
gctttttaagttgaaatcttcattctcatctatatctattatctgtaggt
aggtttggttttatcattgtgtccggacttcctggatattttgagtagga
tctttttgcatttgcattttcct
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctaagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcagattttattgaaag
gacccagatgtagctgtctcttgtgagactatgccggggcctagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcatagggctccatg
gaggagctagagaaagtagccaaggagctaaagggatctgcaacctatag
gtggaacaacttatgaactaactagtaccctggagcctcttgacttctag
ctgcatattatattaaaagatgggctagtcagcccatcacttgatagaga
ggtccatttgactgcactttatgttccagtctggggaacaccaggcaaaa
ggtggaatgtgtgtgtcgggagatggcgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142773325_142773863
seq2: B6Ng01-085M15.b_426_965 (reverse)

seq1  AAGAAAATGGAAAATGCAAAAAGATCCTAACTCAAAATATCCAGGAAATC  50
      | |||||| | ||||||||||||||||| |||||||||||||||||| ||
seq2  AGGAAAAT-GCAAATGCAAAAAGATCCT-ACTCAAAATATCCAGGAAGTC  48

seq1  CAGGACACAATGAGAAGACCAA----ACCTACGGATAATAGGAGTGGATG  96
      | ||||||||||| || |||||    |||||| ||||||||   | ||||
seq2  C-GGACACAATGATAAAACCAAACCTACCTACAGATAATAGATATAGATG  97

seq1  AGAATGAAGATTTTCAACTCAAAGGACCAGCAAACATCTTCAACAAAATT  146
      |||||||||| |||||||| |||   |||| ||| |||||||||||||||
seq2  AGAATGAAGA-TTTCAACTTAAAAAGCCAGTAAATATCTTCAACAAAATT  146

seq1  ATTGAAGAAAACTTGCCAAATCTAAAGAAAGAGATGCCTATGAACATACA  196
      || ||| ||||||| ||  | ||||||||||||||||| ||||| |||||
seq2  ATAGAAAAAAACTTCCCCTACCTAAAGAAAGAGATGCCCATGAATATACA  196

seq1  AGAAGCCTACAGAACTCCAAATAGACTGGACCAGAAAAGAAATTCCTCCC  246
      ||||||||||||||||||||||||||||||||| ||| || | |||||  
seq2  AGAAGCCTACAGAACTCCAAATAGACTGGACCAAAAAGGACAATCCTCTT  246

seq1  AACACATAATAATCAGAACAACAAATGCACTAAATAAAGATAGAATACTA  296
       ||||||||||||||||| |||||||||||||||||||||||||||| ||
seq2  TACACATAATAATCAGAATAACAAATGCACTAAATAAAGATAGAATATTA  296

seq1  AAAGCAGTAAGGGAAAAAGGTCAAGTAACATATAAAGGCAAGCCTATCAG  346
      |||||||||||||||||| |||||||||||||||||||||  ||||| ||
seq2  AAAGCAGTAAGGGAAAAACGTCAAGTAACATATAAAGGCAGACCTATTAG  346

seq1  AATTACACCAGATTTTTCACCAGAGACTATGAAAGCCAGAAGAGCCTGGA  396
      |||||||||||| || ||| ||||||||||| ||||||||||| ||||||
seq2  AATTACACCAGACTTCTCAACAGAGACTATGGAAGCCAGAAGATCCTGGA  396

seq1  CAGATGTTATACAGACACTAAGAGAACACAAATTCCAGCCCAGGCTACTA  446
      |||||| ||||||||| ||||||||||||||||  |||||| ||||||||
seq2  CAGATGCTATACAGACCCTAAGAGAACACAAATGTCAGCCCTGGCTACTA  446

seq1  TACCCAGCCAAACTCTCAATTACCATAGATGGA-GAAACCAAAGTATTCC  495
      |||||||| ||||||||||||||||||||||||  |||||||||||||||
seq2  TACCCAGCAAAACTCTCAATTACCATAGATGGATAAAACCAAAGTATTCC  496

seq1  ATGACAAAACCAAATTCACACATTATCTCTCCACGAATCCAGCC  539
      ||||||||||||||||||||||  |||| |||| ||||||||||
seq2  ATGACAAAACCAAATTCACACAAAATCTTTCCATGAATCCAGCC  540