BAC Information

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BAC

Clone NameB6Ng01-086A13
Chromosome2 (Build37)
Map Location 119,159,317 - 119,352,526
singlet/doubletdoublet
Overlap geneDll4, Chac1, Inoc1, LOC100043612, Exdl1
Upstream geneGpr176, Eif2ak4, Srp14, LOC668859, Bmf, LOC640461, Bub1b, Pak6, Gm1337, Plcb2, LOC100043272, A430105I19Rik, Disp2, D2Ertd750e, Ivd, Bahd1, Chst14, LOC677379, Ccdc32, Rpusd2, Casc5, Rad51, 1200015F23Rik, Gchfr, Dnajc17, OTTMUSG00000015762, LOC545640, Zfyve19, Ppp1r14d, Spint1, Rhov, Vps18, LOC100043609
Downstream gene1500003O03Rik, LOC100043307, Oip5, Nusap1, Ndufaf1, LOC625328, LOC100043622, Rtf1, Itpka, Ltk, Rpap1, Tyro3, 6330405D24Rik, LOC625403, Mga, Mapkbp1, Pla2g4b, Spnb5, Ehd4, Pla2g4e, LOC100043635, Pla2g4d, Pla2g4f, Vps39, Tmem87a, Ganc, Capn3, Zfp106
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086A13.bB6Ng01-086A13.g
ACCDH899540DH899541
length1,1201,085
definitionDH899540|Mus musculus domesticus DNA, BAC clone: B6Ng01-086A13, 5' end.DH899541|Mus musculus domesticus DNA, BAC clone: B6Ng01-086A13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,351,403 - 119,352,526)(119,159,317 - 119,160,412)
sequence
gaattcatggctgcataaatggttcaacagttaaaaaatgtttgttttat
aatgatgaggattggagtttagatcccagtacccacataacaagctgagt
gtccctgtaaacacctgtaacctcagctctgagagaggcagaggcagcaa
gccccaggttcagaaagagactctgccccaaaagaataggcagagagtga
cagaggatgactgccagtgtccttctggccttcatttgcacatagatgca
tacatctgtgcacgtgtgacatagacacatacatatgcttctcttgcaat
ggacctctaagtttggttcctagcaaccacatgcttgtcaatcccagttc
cagaggatctggtgccctctttcatatacatgaaataaagatagatacat
ctctaaaaaataagactgggtgatggtagcatatgcctttaatcccagca
cttgaaagacagagacaggcaaacctctgtgatttcaaggccattctggt
ctacagagcaagttccagaacagacagcggtatgtacaaagaaaccctgt
ctggctgggcggtggtggtgcacgcctttaatcccagcacttgggaggca
gaggcaggtggatttctgagttggaggccagcctggtctacagagtgagt
tccaggacagtcagggctacacagagaaaccctgtctcaaaaaccaaaaa
ccaaaccaaacaaacaaaacccaaacaaacaaacaaaaaaaaaaaaaaat
gaaaggaaggaaggaaaaaaaggaaggaaggaaggaaagaaatctttttt
tttttctgtacaaagagaaaatgtcacaccacagacgccccaaactgagg
atgactttgaagccctgatcctcctgcctacaccttccaaaatactagga
tcactgcaagctctaccatgcccagcatagacacagatacactggagtca
ttatttagcctgtgccatgtgggttgcaggtgcaggcacagagcaccaag
tgcacacatggaggtcatgagcagccatgaagtaaggctgggtctttctt
ctccacagtctctggctgttcactgcatgcaccagcctgctgctggtgag
cctcctgtccttgctctagg
gaattccaggacagccagggctacacagagaaaccctgtttcaaaaaacc
aaaaaaccaaaaaaaaaaaaaaaaaaaagaattctgctaggaatctttta
ctagggaagtccctctcattcattcattcattcattcattcattcattca
ttcagtcttaactcccaaataccaagtgtccacagtatatctctcgtggt
ttccatcttcccacagtagggcttgtctctagtggcaatactggcttttt
tctggtttggtcggctcctgtagctcccttagaggcctattctaaccccc
tgcccctgaaggccagcactgagcatcctccccgatgccctccccgaacc
cctccggacccctgcagcacataccctaaaggggatctctgggatctaga
ctgacagctccttgcttgtcccctccctattccttccttcttacctccct
gtcttctgttccttcagtgagaagccagagtgtcgaatatcagccatttg
ctctcccagggactctatgtaccaatcagtgtgtttgatatcagaagaga
ggaacgagtgtgtgattgccacagaggtgagttcttccctctaagcatgt
cccctcctgctttgtgtggtgggaaaaaaatgtcctgttcactagcaatc
tcattcctgaaggggtgggtcagagatctcttctttggtgtgtagtggct
cttgggtgccctgctggccccattgccacagagggagtgatactggagcc
aggtggtatgcctgactttggcagctgtgccagggaaagggacatagtca
aggagcaagagaaggctcaggcagagcttcagaactatttcccactttgc
ctttgggtgaagacacagggttacctgtgtctgcttcttcattgaactcc
tcttgtgtgtcttagagcaggaggctgagggtactaactccctcagtggt
gtctctagagagtcagagcacttctggatcattgcataccgcccccccca
cccccggtataaccattttccattttgatgtgatcccaggtataaggcag
gagcctacttagatcctgttctgcccagcagctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_119351403_119352526
seq2: B6Ng01-086A13.b_41_1160 (reverse)

seq1  CCTAGAGCAGAGACAGGAGGCTCACAGGCCAGC--CAGGCTGGTGCATGC  48
      |||||||||  |||||||||||||    |||||  |||||||||||||||
seq2  CCTAGAGCAAGGACAGGAGGCTCA----CCAGCAGCAGGCTGGTGCATGC  46

seq1  AGTGAACAGCAGGAGACTGGTGAGAAGGAAAGAGCCAGCCTTAC-TCATG  97
      ||||||||||  |||||||  ||||| |||||| |||||||||| |||||
seq2  AGTGAACAGCCAGAGACTGTGGAGAA-GAAAGACCCAGCCTTACTTCATG  95

seq1  GCTGCTCCTGACCTCCATGTGTGCACTTGGTGCCTCTGTGCCTGCACCTG  147
      ||||||| |||||||||||||||||||||||| |||||||||||||||||
seq2  GCTGCTCATGACCTCCATGTGTGCACTTGGTG-CTCTGTGCCTGCACCTG  144

seq1  CACCCCACATGGCACAGGCTAAATAATGACTCCAGTGTATCTGTGTCTAT  197
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCACATGGCACAGGCTAAATAATGACTCCAGTGTATCTGTGTCTAT  194

seq1  GCTGGGCATGGTAGAGCTTGCAGTGATCCTAGTA-TTTGGAAGGTGTAGG  246
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GCTGGGCATGGTAGAGCTTGCAGTGATCCTAGTATTTTGGAAGGTGTAGG  244

seq1  CAGGAGGATCAGGGCTTCAAAGTCATCCTCAGTTTGGGGCGTCTGTGGTG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGATCAGGGCTTCAAAGTCATCCTCAGTTTGGGGCGTCTGTGGTG  294

seq1  TGACATTTTCTCTTTGTACAGAAAAAAAAAAAGATTTCTTTCCTTCCTTC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTTTCTCTTTGTACAGAAAAAAAAAAAGATTTCTTTCCTTCCTTC  344

seq1  CTTCCTTTTTTTCCTTCCTTCCTTTCATTTTTTTTTTTTTTTTGTTTGTT  396
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTTCCTTTTTTTCCTTCCTTCCTTTCA-TTTTTTTTTTTTTTTGTTTGTT  393

seq1  TGTTTGGGTTTTGTTTGTTTGGTTTGGTTTTTGGTTTTTTGAGACAGGGT  446
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TGTTTGGGTTTTGTTTGTTTGGTTTGGTTTTTGG-TTTTTGAGACAGGGT  442

seq1  TTCTCTGTGTAGCCCTGACTGTCCTGGAACTCACTCTGTAGACCAGGCTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTGTAGCCCTGACTGTCCTGGAACTCACTCTGTAGACCAGGCTG  492

seq1  GCCTCCAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTA  542

seq1  AAGGCGTGCACCACCACCGCCCAGCCAGACAGGGTTTCTTTGTACATACC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCGTGCACCACCACCGCCCAGCCAGACAGGGTTTCTTTGTACATACC  592

seq1  GCTGTCTGTTCTGGAACTTGCTCTGTAGACCAGAATGGCCTTGAAATCAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTGTTCTGGAACTTGCTCTGTAGACCAGAATGGCCTTGAAATCAC  642

seq1  AGAGGTTTGCCTGTCTCTGTCTTTCAAGTGCTGGGATTAAAGGCATATGC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTTTGCCTGTCTCTGTCTTTCAAGTGCTGGGATTAAAGGCATATGC  692

seq1  TACCATCACCCAGTCTTATTTTTTAGAGATGTATCTATCTTTATTTCATG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATCACCCAGTCTTATTTTTTAGAGATGTATCTATCTTTATTTCATG  742

seq1  TATATGAAAGAGGGCACCAGATCCTCTGGAACTGGGATTGACAAGCATGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGAAAGAGGGCACCAGATCCTCTGGAACTGGGATTGACAAGCATGT  792

seq1  GGTTGCTAGGAACCAAACTTAGAGGTCCATTGCAAGAGAAGCATATGTAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCTAGGAACCAAACTTAGAGGTCCATTGCAAGAGAAGCATATGTAT  842

seq1  GTGTCTATGTCACACGTGCACAGATGTATGCATCTATGTGCAAATGAAGG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTATGTCACACGTGCACAGATGTATGCATCTATGTGCAAATGAAGG  892

seq1  CCAGAAGGACACTGGCAGTCATCCTCTGTCACTCTCTGCCTATTCTTTTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGGACACTGGCAGTCATCCTCTGTCACTCTCTGCCTATTCTTTTG  942

seq1  GGGCAGAGTCTCTTTCTGAACCTGGGGCTTGCTGCCTCTGCCTCTCTCAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGAGTCTCTTTCTGAACCTGGGGCTTGCTGCCTCTGCCTCTCTCAG  992

seq1  AGCTGAGGTTACAGGTGTTTACAGGGACACTCAGCTTGTTATGTGGGTAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGGTTACAGGTGTTTACAGGGACACTCAGCTTGTTATGTGGGTAC  1042

seq1  TGGGATCTAAACTCCAATCCTCATCATTATAAAACAAACATTTTTTAACT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATCTAAACTCCAATCCTCATCATTATAAAACAAACATTTTTTAACT  1092

seq1  GTTGAACCATTTATGCAGCCATGAATTC  1124
      ||||||||||||||||||||||||||||
seq2  GTTGAACCATTTATGCAGCCATGAATTC  1120

seq1: chr2_119159317_119160412
seq2: B6Ng01-086A13.g_70_1154

seq1  GAATTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTTTCAAAAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTTTCAAAAAACC  50

seq1  AAAAAACCAAAAAAAAAAAAAAAAAAAAGAATTCTGCTAGGAATCTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACCAAAAAAAAAAAAAAAAAAAAGAATTCTGCTAGGAATCTTTTA  100

seq1  CTAGGGAAGTCCCTCTCATTCATTCATTCATTCATTCATTCATTCATTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGAAGTCCCTCTCATTCATTCATTCATTCATTCATTCATTCATTCA  150

seq1  TTCAGTCTTAACTCCCAAATACCAAGTGTCCACAGTATATCTCTCGTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCTTAACTCCCAAATACCAAGTGTCCACAGTATATCTCTCGTGGT  200

seq1  TTCCATCTTCCCACAGTAGGGCTTGTCTCTAGTGGCAATACTGGCTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCTTCCCACAGTAGGGCTTGTCTCTAGTGGCAATACTGGCTTTTT  250

seq1  TCTGGTTTGGTCGGCTCCTGTAGCTCCCTTAGAGGCCTATTCTAACCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTTGGTCGGCTCCTGTAGCTCCCTTAGAGGCCTATTCTAACCCCC  300

seq1  TGCCCCTGAAGGCCAGCACTGAGCATCCTCCCCGATGCCCTCCCCGAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCTGAAGGCCAGCACTGAGCATCCTCCCCGATGCCCTCCCCGAACC  350

seq1  CCTCCGGACCCCTGCAGCACATACCCTAAAGGGGATCTCTGGGATCTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCGGACCCCTGCAGCACATACCCTAAAGGGGATCTCTGGGATCTAGA  400

seq1  CTGACAGCTCCTTGCTTGTCCCCTCCCTATTCCTTCCTTCTTACCTCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGCTCCTTGCTTGTCCCCTCCCTATTCCTTCCTTCTTACCTCCCT  450

seq1  GTCTTCTGTTCCTTCAGTGAGAAGCCAGAGTGTCGAATATCAGCCATTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTGTTCCTTCAGTGAGAAGCCAGAGTGTCGAATATCAGCCATTTG  500

seq1  CTCTCCCAGGGACTCTATGTACCAATCAGTGTGTTTGATATCAGAAGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCAGGGACTCTATGTACCAATCAGTGTGTTTGATATCAGAAGAGA  550

seq1  GGAACGAGTGTGTGATTGCCACAGAGGTGAGTTCTTCCCTCTAAGCATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACGAGTGTGTGATTGCCACAGAGGTGAGTTCTTCCCTCTAAGCATGT  600

seq1  CCCCTCCTGCTTTGTGTGGTGGGAAAAAAATGTCCTGTTCACTAGCAATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCTGCTTTGTGTGGTGGGAAAAAAATGTCCTGTTCACTAGCAATC  650

seq1  TCATTCCTGAAGGGGTGGGTCAGAGATCTCTTCTTTGGTGTGTAGTGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCTGAAGGGGTGGGTCAGAGATCTCTTCTTTGGTGTGTAGTGGCT  700

seq1  CTTGGGTGCCCTGCTGGCCCCATTGCCACAGAGGGAGTGATACTGGAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGTGCCCTGCTGGCCCCATTGCCACAGAGGGAGTGATACTGGAGCC  750

seq1  AGGTGGTATGCCTGAC-TTGGCAGCTGTGCCAGGGAAAGGGACATAGTCA  799
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGGTGGTATGCCTGACTTTGGCAGCTGTGCCAGGGAAAGGGACATAGTCA  800

seq1  AGGAGCAGGAGAAGGCTCAGGCAGAGCTTTCAGGAACTATTTCCCAC-TT  848
      ||||||| ||||||||||||||||||| |||| |||||||||||||| ||
seq2  AGGAGCAAGAGAAGGCTCAGGCAGAGC-TTCA-GAACTATTTCCCACTTT  848

seq1  GCCTTTGGGTGAAGACACAGGGTTACCTGTGTCTGCTTCCTCCATTGAAC  898
      |||||||||||||||||||||||||||||||||||||| || ||||||||
seq2  GCCTTTGGGTGAAGACACAGGGTTACCTGTGTCTGCTT-CTTCATTGAAC  897

seq1  TCCTCTTGTGTGTCTTAGAGCAGGAGGCTGAGGGTACTAACTCCCTCAGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTGTGTGTCTTAGAGCAGGAGGCTGAGGGTACTAACTCCCTCAGT  947

seq1  GGTGTCTCCTAGAGAGGTCCAGAGCACCTCTGGATCATTGCATACCGCCC  998
      ||||||| ||||||||   |||||||| ||||||||||||||||||| ||
seq2  GGTGTCT-CTAGAGAG--TCAGAGCACTTCTGGATCATTGCATACCG-CC  993

seq1  CCCCCCACCCCCGGTATAACCATTTTCCCATTTTGTATGTGATCCCCAGG  1048
      |||||||||||||||||||||||||| |||||||| ||||||| ||||||
seq2  CCCCCCACCCCCGGTATAACCATTTT-CCATTTTG-ATGTGAT-CCCAGG  1040

seq1  TATAAGGCAGGAGCCTACTCAGACACCCAGCTCCGGCCCAGCAGCTGG  1096
      ||||||||||||||||||| ||  | || | | | |||||||||||||
seq2  TATAAGGCAGGAGCCTACTTAG--ATCCTG-TTCTGCCCAGCAGCTGG  1085