BAC Information

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BAC

Clone NameB6Ng01-086E08
Chromosome2 (Build37)
Map Location 122,651,695 - 122,817,489
singlet/doubletdoublet
Overlap genenone
Upstream geneCasc4, Mageb3, Ctdspl2, Eif3s1, 4930424G05Rik, B2m, Trim69, 4933406J08Rik, LOC433468, LOC670832, Sord, Duox2, Duoxa2, Duoxa1, Duox1, Shf, Slc28a2, Bambi-ps1, Rp23-357i14.1, Gatm, Spata5l1, AA467197, Slc30a4, Pldn, Sqrdl
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086E08.bB6Ng01-086E08.g
ACCDH899715DH899716
length7171,154
definitionDH899715|Mus musculus domesticus DNA, BAC clone: B6Ng01-086E08, 5' end.DH899716|Mus musculus domesticus DNA, BAC clone: B6Ng01-086E08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(122,651,695 - 122,652,411)(122,816,320 - 122,817,489)
sequence
gaattcagtttgctgttaaaagcaggcccctgcttgagtggggcctttat
tacccgcacctggtccctaacccaggtctctgggaaattttctttgttgc
caagctctgtggctgtagtgccgatccacttaatagcagaaaattgggcg
ctaactgtatcatttgtcagccacactgtgggatttcagattccttaatt
aaacttgcgtgtttcagatttcataaagtgaatctgtgttttatgtgcat
aggatgtgaacgtgtggaatggagagaatgggaccttaatgacctcctgg
acagatacaattcaaattccctaaccacatttactaaaggcacggctgac
tttcaatgtctcatagatttcctagtggcgaagggaatgaggtgacactt
cccatcacatttctataatgaagttattagggttgaatttatttttggtt
ttcccccatattcactgttttcagatgaacacttttgtttgtttccttac
tgataaccagtagatggctctgtggcatttctagagttgacaattgttag
tttggtgcctcttaatatatgagagtaatttactttccctctggcctgtg
gggaaatcttgagccgttccattcagtcccatggatgaggagaacggctg
atgaaggttctttttctccctcagttgttaggaaattttgtgtgtgtgtg
tgtgtgtgtgtgtgtgt
gaattcaagtcatggagatggagaaatgtgcttttccagacaaaaaaaaa
aaaaaaaggaaagaaaaagacatgtttaagaaaaagagaaaataaattct
tggcttatcccacattccagctgcaaaaaaaaaaaaaaagctaagaaagg
tatagggagattatatattccacccacagaatttgactacagacagaaaa
agttactcctatctcattgtgattaaagtcgagtgagtctgagctgtgac
tggagacaggaagaacagcatacagctttacaacgtgaacaccagaagca
ccctgagctggttctgtgaggatgttatggactcccaggggaagtctttg
gatgaaactgcacatatttgggaacaaagacctggctgtaaactgttgtg
agtcagaacaaaatttgttagcattgacttaagcttcaattctattgctt
ggtctgttgcttaggaaactattgactattgaaataacaatgccaaagag
ctagacaaattaaaagtatcaattttaaaagtgagggaacacatttatta
aaagaggcaggaaagaatcaacacttatcgaacagctcccatgccccagc
tctaaactgcttcatattagatcccatctaatctccaggagcctctgtgt
gaggacagaatgcaagctcttctgaggctggatctgcccattcagtgact
cttttatacccccagcatctagaacaatgcctacagtttaggaggcactc
aagaaattgtattcaaaaatggataagtacattaccttcattttctactc
taaactgaagactcatacagtatatttaaattgcaagtggcacaggttgc
caagattatatgacgttcagccaggcatcaaatcatacccccttgaaaaa
taattttctgctcaaataagaacttgtaaaatatttctgatgtttacaca
aagaaattatgaaaccttacctggacctttctggatctttcaaagtggag
gaaatgctctctatttgacgatgagaaagtatcattcatgaaactttaca
gtacaatctcttttttcaatattcactttattttagtacattttgggggg
ttcctgcagatttggatcagggaggtcaaagagtcattcgatccatggag
ctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_122651695_122652411
seq2: B6Ng01-086E08.b_49_765

seq1  GAATTCAGTTTGCTGTTAAAAGCAGGCCCCTGCTTGAGTGGGGCCTTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTGCTGTTAAAAGCAGGCCCCTGCTTGAGTGGGGCCTTTAT  50

seq1  TACCCGCACCTGGTCCCTAACCCAGGTCTCTGGGAAATTTTCTTTGTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCGCACCTGGTCCCTAACCCAGGTCTCTGGGAAATTTTCTTTGTTGC  100

seq1  CAAGCTCTGTGGCTGTAGTGCCGATCCACTTAATAGCAGAAAATTGGGCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTCTGTGGCTGTAGTGCCGATCCACTTAATAGCAGAAAATTGGGCG  150

seq1  CTAACTGTATCATTTGTCAGCCACACTGTGGGATTTCAGATTCCTTAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTGTATCATTTGTCAGCCACACTGTGGGATTTCAGATTCCTTAATT  200

seq1  AAACTTGCGTGTTTCAGATTTCATAAAGTGAATCTGTGTTTTATGTGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGCGTGTTTCAGATTTCATAAAGTGAATCTGTGTTTTATGTGCAT  250

seq1  AGGATGTGAACGTGTGGAATGGAGAGAATGGGACCTTAATGACCTCCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTGAACGTGTGGAATGGAGAGAATGGGACCTTAATGACCTCCTGG  300

seq1  ACAGATACAATTCAAATTCCCTAACCACATTTACTAAAGGCACGGCTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATACAATTCAAATTCCCTAACCACATTTACTAAAGGCACGGCTGAC  350

seq1  TTTCAATGTCTCATAGATTTCCTAGTGGCGAAGGGAATGAGGTGACACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATGTCTCATAGATTTCCTAGTGGCGAAGGGAATGAGGTGACACTT  400

seq1  CCCATCACATTTCTATAATGAAGTTATTAGGGTTGAATTTATTTTTGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCACATTTCTATAATGAAGTTATTAGGGTTGAATTTATTTTTGGTT  450

seq1  TTCCCCCATATTCACTGTTTTCAGATGAACACTTTTGTTTGTTTCCTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCATATTCACTGTTTTCAGATGAACACTTTTGTTTGTTTCCTTAC  500

seq1  TGATAACCAGTAGATGGCTCTGTGGCATTTCTAGAGTTGACAATTGTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAACCAGTAGATGGCTCTGTGGCATTTCTAGAGTTGACAATTGTTAG  550

seq1  TTTGGTGCCTCTTAATATATGAGAGTAATTTACTTTCCCTCTGGCCTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGCCTCTTAATATATGAGAGTAATTTACTTTCCCTCTGGCCTGTG  600

seq1  GGGAAATCTTGAGCCGTTCCATTCAGTCCCATGGATGAGGAGAACGGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATCTTGAGCCGTTCCATTCAGTCCCATGGATGAGGAGAACGGCTG  650

seq1  ATGAAGGTTCTTTTTCTCCCTCAGTTGTTAGGAAATTTTGTGTGTGTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGTTCTTTTTCTCCCTCAGTTGTTAGGAAATTTTGTGTGTGTGTG  700

seq1  TGTGTGTGTGTGTGTGT  717
      |||||||||||||||||
seq2  TGTGTGTGTGTGTGTGT  717

seq1: chr2_122816320_122817489
seq2: B6Ng01-086E08.g_70_1223 (reverse)

seq1  TCAGCTCCATGTGATCGGATGACCTCTTCTGACCCTCACTGCACTCATAT  50
      ||||||||||| ||||| |||| ||||| ||| |||| ||| |  || ||
seq2  TCAGCTCCATG-GATCGAATGA-CTCTT-TGA-CCTCCCTG-ATCCAAAT  45

seq1  CTGCAAGGACACCCCAAAATGTAACTAAAAATAAAAGTGAAATATTGGAA  100
      ||||| | || ||||||||||| |||||||   |||||| ||||||| ||
seq2  CTGCAGGAACCCCCCAAAATGT-ACTAAAA--TAAAGTG-AATATTGAAA  91

seq1  AAAGAGATTTGTACTGTAAAGTTTCATGAATGAATACTTTCTCATCGGTC  150
      ||||||| |||||||||||||||||||||||| ||||||||||||| |||
seq2  AAAGAGA-TTGTACTGTAAAGTTTCATGAATG-ATACTTTCTCATC-GTC  138

seq1  AAAATAGAGAGCATTTCCTCCACTTTTGAAAGATCCAAGAAAGGTCCAGG  200
       |||||||||||||||||||||| |||||||||||| |||||||||||||
seq2  -AAATAGAGAGCATTTCCTCCAC-TTTGAAAGATCC-AGAAAGGTCCAGG  185

seq1  TAAGGTTTTCATAATTTTCTTTGTGTAAACATCAGAAATATTTTACAAGT  250
      ||||| |||||||| |||||||||||||||||||||||||||||||||||
seq2  TAAGG-TTTCATAA-TTTCTTTGTGTAAACATCAGAAATATTTTACAAGT  233

seq1  TCTTATTTGAGCAGAAAATTATTTTTCAAGGGGGTATGATTTGATGCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTTGAGCAGAAAATTATTTTTCAAGGGGGTATGATTTGATGCCTG  283

seq1  GCTGAACGTCATATAATCTTGGCAACCTGTGCCACTTGCAATTTAAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAACGTCATATAATCTTGGCAACCTGTGCCACTTGCAATTTAAATAT  333

seq1  ACTGTATGAGTCTTCAGTTTAGAGTAG-AAATGAAGGTAATGTACTTATC  399
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACTGTATGAGTCTTCAGTTTAGAGTAGAAAATGAAGGTAATGTACTTATC  383

seq1  CATTTTTGAATACAATTTCTTGAGTGCCTCCTAAACTGTAGGCATTGTTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTGAATACAATTTCTTGAGTGCCTCCTAAACTGTAGGCATTGTTC  433

seq1  TAGATGCTGGGGGTATAAAAGAGTCACTGAATGGGCAGATCCAGCCTCAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGCTGGGGGTATAAAAGAGTCACTGAATGGGCAGATCCAGCCTCAG  483

seq1  AAGAGCTTGCATTCTGTCCTCACACAGAGGCTCCTGGAGATTAGATGGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTTGCATTCTGTCCTCACACAGAGGCTCCTGGAGATTAGATGGGA  533

seq1  TCTAATATGAAGCAGTTTAGAGCTGGGGCATGGGAGCTGTTCGATAAGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATATGAAGCAGTTTAGAGCTGGGGCATGGGAGCTGTTCGATAAGTG  583

seq1  TTGATTCTTTCCTGCCTCTTTTAATAAATGTGTTCCCTCACTTTTAAAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTCTTTCCTGCCTCTTTTAATAAATGTGTTCCCTCACTTTTAAAAT  633

seq1  TGATACTTTTAATTTGTCTAGCTCTTTGGCATTGTTATTTCAATAGTCAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACTTTTAATTTGTCTAGCTCTTTGGCATTGTTATTTCAATAGTCAA  683

seq1  TAGTTTCCTAAGCAACAGACCAAGCAATAGAATTGAAGCTTAAGTCAATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTCCTAAGCAACAGACCAAGCAATAGAATTGAAGCTTAAGTCAATG  733

seq1  CTAACAAATTTTGTTCTGACTCACAACAGTTTACAGCCAGGTCTTTGTTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAAATTTTGTTCTGACTCACAACAGTTTACAGCCAGGTCTTTGTTC  783

seq1  CCAAATATGTGCAGTTTCATCCAAAGACTTCCCCTGGGAGTCCATAACAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATATGTGCAGTTTCATCCAAAGACTTCCCCTGGGAGTCCATAACAT  833

seq1  CCTCACAGAACCAGCTCAGGGTGCTTCTGGTGTTCACGTTGTAAAGCTGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACAGAACCAGCTCAGGGTGCTTCTGGTGTTCACGTTGTAAAGCTGT  883

seq1  ATGCTGTTCTTCCTGTCTCCAGTCACAGCTCAGACTCACTCGACTTTAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGTTCTTCCTGTCTCCAGTCACAGCTCAGACTCACTCGACTTTAAT  933

seq1  CACAATGAGATAGGAGTAACTTTTTCTGTCTGTAGTCAAATTCTGTGGGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGAGATAGGAGTAACTTTTTCTGTCTGTAGTCAAATTCTGTGGGT  983

seq1  GGAATATATAATCTCCCTATACCTTTCTTAGCTTTTTTTTTTTTTTTGCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATATAATCTCCCTATACCTTTCTTAGCTTTTTTTTTTTTTTTGCA  1033

seq1  GCTGGAATGTGGGATAAGCCAAGAATTTATTTTCTCTTTTTCTTAAACAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAATGTGGGATAAGCCAAGAATTTATTTTCTCTTTTTCTTAAACAT  1083

seq1  GTCTTTTTCTTTCCTTTTTTTTTTTTTTTTGTCTGGAAAAGCACATTTCT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTTCTTTCCTTTTTTTTTTTTTTTTGTCTGGAAAAGCACATTTCT  1133

seq1  CCATCTCCATGACTTGAATTC  1170
      |||||||||||||||||||||
seq2  CCATCTCCATGACTTGAATTC  1154