BAC Information

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BAC

Clone NameB6Ng01-086N20
Chromosome2 (Build37)
Map Location 7,234,816 - 7,235,948
singlet/doubletsinglet
Overlap genenone
Upstream gene1700014B07Rik, Usp6nl, LOC100040387, Cugbp2, LOC100040659
Downstream geneLOC100040648, LOC672230
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086N20.bB6Ng01-086N20.g
ACCDH900150DH900151
length1,1881,113
definitionDH900150|Mus musculus domesticus DNA, BAC clone: B6Ng01-086N20, 5' end.DH900151|Mus musculus domesticus DNA, BAC clone: B6Ng01-086N20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttaactctgtagcccatttttaatagggttatttggttt
tctggagtctaacttcttgagttctttgtatatgttggatataagccctc
tatcaaatttaggattggtaaagatcttttcccaatcttttggttgccct
tttatcttattaacagtgtccttttccttacagaagctttgcaattttat
gaggacccatttgtcaattcttgatcttacagcaaaagctactggtggtt
caagaattttcccctgtgcccatatcttcaaggctcttccccagtttctc
ttctataagtttccatgtctctgtatgtagagttccacatgatcatctca
ttagatgctgagaaagtatttgacaaaatctaacacctattcatgataaa
agtctgggaaagatcaggaattcaaggcccatacccaaacataataaaag
caatatacagcaaaccagtagccaacatcaaactagaagaaatcccacta
aaagtcagggtctagacaagactgcccactctcttcctacctattcaata
tagtacttgatgtcctagccagagcaattagacaataaaaggagatcaaa
gagatacaaattggaaaggaagacgtcaaaatatcactacttgcagatga
tatgatagtatacataagtgaccctaaaaattccaccagagaattcctaa
acccaataaacaacttcagtgaagtagctggatataaaattaactcaaac
aaatcagtggcctttctttacacaaagcataaacaggctgagaaagaaat
tagggaaagaacacccttcacaatagtcataaataatataaaatatgttg
gtgtgactctaactaagcaagtgaaagttctgtatgataagatgtatttc
aagtctctgaagaaagaaatcaaagatctcagaagacggaagatctccca
tgctcatggattggcaggattaatatagtaaaatggccatctgctaaagc
aatccacagattcatgcattgttcaaaatcactcattcttcacagagtaa
gaggcatttgcaaatcatctggaataattaaaactaggatagcaaaacta
gtctcagcattaaagaacccttcttggtgatccatgctgactcagcgtac
tacgagcaatgtgattaaaaacaggccattggtagctg
gaattcctttacacttaggagaaaatggtgagaagaaggagtctgtaatg
gttattcttctttgcccattgactgaactggaattatccaggagacacac
ccctgggtatgtctttcagggcaattccagatagatttagctgggttgac
agcctagaatgtgtgaaatggggcaggagagggggagctaactgaataac
ggtgctcagttctcttctctttccagactgtacttgcagtgtggccaggg
gtctcacacttctgctacatccttccaacaatgacagactgcatcctctc
caactgtgaggaaaataaacccttccttacactgtttttgcaaggtatca
tggtgcagaaatgagagaggtaactaaaacaggatataataaaattgaaa
acgttatcttcactccgactagagcagaaacgcattgtgtcagaggatcc
ctctgtgatgctgctgtaatgtgggcacatgtgtgcatgcatgtgtaggg
atacggacatgcttgtgtttgcacatgtggaggcttgagatggatgctag
gcatctttctgtatagttctccaccttgttcatttgagacagaggctctt
gctgaccttgaagctcattgcttggctacactgctgagccagtgacctcc
tgtctcttccttttttgccttgtgactataagattatctcaccacacctg
gatttttgtgtgggttttaatgttcaaaactcgtgttttcacatttgcac
agcaaatgtttaatgactgggccatctctccaacccaggattctagaatg
aattcagaataaaattcccttttggagttgtccacggactactctgaaat
gagagttattcttgggaagttgacctgaatttgaaagaatctgtgcagag
tcaaacagatataaatcagattgaggattttgtgacactgaaccctccaa
ttaaagattttctttttagccctgtgtagtcggtggcaagcagttaaact
gccagtagctttgtggcgtatgctatagaaccaggagcacagacccctct
taaggtgttcataattggtatattcaatcataactatcgtagcacctttt
ctattctagagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_7234816_7235948
seq2: B6Ng01-086N20.g_67_1179

seq1  GAATTCCTTTACACTTAGGAGAAAATGGTGAGAAGAAGGAGTCTGTAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTACACTTAGGAGAAAATGGTGAGAAGAAGGAGTCTGTAATG  50

seq1  GTTATTCTTCTTTGCCCATTGACTGAACTGGAATTATCCAGGAGACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTCTTCTTTGCCCATTGACTGAACTGGAATTATCCAGGAGACACAC  100

seq1  CCCTGGGTATGTCTTTCAGGGCAATTCCAGATAGATTTAGCTGGGTTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGTATGTCTTTCAGGGCAATTCCAGATAGATTTAGCTGGGTTGAC  150

seq1  AGCCTAGAATGTGTGAAATGGGGCAGGAGAGGGGGAGCTAACTGAATAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAGAATGTGTGAAATGGGGCAGGAGAGGGGGAGCTAACTGAATAAC  200

seq1  GGTGCTCAGTTCTCTTCTCTTTCCAGACTGTACTTGCAGTGTGGCCAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTCAGTTCTCTTCTCTTTCCAGACTGTACTTGCAGTGTGGCCAGGG  250

seq1  GTCTCACACTTCTGCTACATCCTTCCAACAATGACAGACTGCATCCTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCACACTTCTGCTACATCCTTCCAACAATGACAGACTGCATCCTCTC  300

seq1  CAACTGTGAGGAAAATAAACCCTTCCTTACACTGTTTTTGCAAGGTATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGTGAGGAAAATAAACCCTTCCTTACACTGTTTTTGCAAGGTATCA  350

seq1  TGGTGCAGAAATGAGAGAGGTAACTAAAACAGGATATAATAAAATTGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCAGAAATGAGAGAGGTAACTAAAACAGGATATAATAAAATTGAAA  400

seq1  ACGTTATCTTCACTCCGACTAGAGCAGAAACGCATTGTGTCAGAGGATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTATCTTCACTCCGACTAGAGCAGAAACGCATTGTGTCAGAGGATCC  450

seq1  CTCTGTGATGCTGCTGTAATGTGGGCACATGTGTGCATGCATGTGTAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGATGCTGCTGTAATGTGGGCACATGTGTGCATGCATGTGTAGGG  500

seq1  ATACGGACATGCTTGTGTTTGCACATGTGGAGGCTTGAGATGGATGCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGGACATGCTTGTGTTTGCACATGTGGAGGCTTGAGATGGATGCTAG  550

seq1  GCATCTTTCTGTATAGTTCTCCACCTTGTTCATTTGAGACAGAGGCTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTTCTGTATAGTTCTCCACCTTGTTCATTTGAGACAGAGGCTCTT  600

seq1  GCTGACCTTGAAGCTCATTGCTTGGCTACACTGCTGAGCCAGTGACCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACCTTGAAGCTCATTGCTTGGCTACACTGCTGAGCCAGTGACCTCC  650

seq1  TGTCTCTTCCTTTTTTGCCTTGTGACTATAAGATTATCTCACCACACCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTTCCTTTTTTGCCTTGTGACTATAAGATTATCTCACCACACCTG  700

seq1  GATTTTTGTGTGGGTTTTAATGTTCAAAACTCGTGTTTTCACATTTGCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTGTGTGGGTTTTAATGTTCAAAACTCGTGTTTTCACATTTGCAC  750

seq1  AGCAAATGTTTAATGACTGGGCCATCTCTCCAACCCAGGATTCTAGAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATGTTTAATGACTGGGCCATCTCTCCAACCCAGGATTCTAGAATG  800

seq1  AATTCAGAATAAAATTCCCTTTTGGAGTTGTCCACGGACTACTCTGAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGAATAAAATTCCCTTTTGGAGTTGTCCACGGACTACTCTGAAAT  850

seq1  GAGAGTTATTCTTGGGAAGTTGACCTGAATTTGAAAGAAATCTGTGCAGA  900
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GAGAGTTATTCTTGGGAAGTTGACCTGAATTTGAAAG-AATCTGTGCAGA  899

seq1  GTCAAAACAGATATAAATCAGATTGAGGATTTTGTGACACTGAACCCTCC  950
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTC-AAACAGATATAAATCAGATTGAGGATTTTGTGACACTGAACCCTCC  948

seq1  AATTAAAGATTTTCTTTTTAGCCCTGTGTAGTCGGTTGGCAAGCAAGTTT  1000
      ||||||||||||||||||||||||||||||||||| |||||||| |||| 
seq2  AATTAAAGATTTTCTTTTTAGCCCTGTGTAGTCGG-TGGCAAGC-AGTT-  995

seq1  AAAACTGCCAAGTAGGCTTTGTGGCGTATGCTATAGAAACCCAAGGAGCC  1050
       |||||||| |||| |||||||||||||||||||||||   | |||||| 
seq2  -AAACTGCC-AGTA-GCTTTGTGGCGTATGCTATAGAA---CCAGGAGC-  1038

seq1  ACCAGACACCTC-TAAAGTGTCACTAATTGGTATTAATTTCCATTCAATA  1099
        ||||| |||| ||| ||||   ||||||||||  |||  || || |||
seq2  -ACAGACCCCTCTTAAGGTGTTCATAATTGGTAT--ATT--CAATC-ATA  1082

seq1  ACTATCGTAGCAAACTTTTTCTATTCCTAGAGCT  1133
      |||||||||||  || ||||||||| ||||||||
seq2  ACTATCGTAGC--ACCTTTTCTATT-CTAGAGCT  1113