BAC Information

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BAC

Clone NameB6Ng01-087E22
Chromosome2 (Build37)
Map Location 85,614,119 - 85,752,895
singlet/doubletdoublet
Overlap geneOlfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024
Upstream geneSerping1, Ube2l6, Smtnl1, Timm10, Slc43a1, Rtn4rl2, Slc43a3, Prg2, Prg3, P2rx3, Ssrp1, Tnks1bp1, Agtrl1, LOC625033, Lrrc55, Olfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013
Downstream geneOlfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087E22.bB6Ng01-087E22.g
ACCDH900472DH900473
length1,2141,154
definitionDH900472|Mus musculus domesticus DNA, BAC clone: B6Ng01-087E22, 5' end.DH900473|Mus musculus domesticus DNA, BAC clone: B6Ng01-087E22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,751,687 - 85,752,895)(85,614,119 - 85,615,286)
sequence
gaattcttttgacaaatgaagattatagttgtcaaaatcccataaaaccc
aaaacatatatcaatgatgcttttgaatataggaggagagatattttatt
aaaattgtgaaaattttattaattatttccctaaaatataagattttgag
agagatgtgaatgaaagtctatgaatcaaataaaatcaagtggatttcct
ggccccatttttttcttgtggacaattctcaatctgatattagatcccat
acttattgcttgatatctttaccaagatgttttgaatggtatttcctcat
aagtgatttccatataaatataatgcattcttctgtcagggtattttcag
atttatccaagtaatatctaagaggatagtattttaatttgaaacctaac
tcttgctgtcttttacaaaagcacttaattaccctaaattcttttttatc
tgtaagaaacaaattttactttctatcttctagcagtgctaatgctatac
ttttgactccaacacacacacacacacacacacacacacacacacacaca
cacacgacaatagctattccatgttaagtgcctaatgtcttagtcactgg
tatataaaaatactggtgagataatgttacttgtcacactaatttcaaat
attcatcataattaattatatagaaagtatgaaaatcatatctgccattg
tttgttttcctgctgaaaacagtttaagcagttgttcagcagttgaaaaa
aagctgcaattctgttaatcatcctgagtgagaacaaaactaacacccaa
agttaaattaattaagtaatctttatttactaagcataggactggctctc
caaagggggacttgagagtacagtgttggttaaatattagtcctactttt
atagggaaaaaaatataactaggagttttgtaacacaatcatttcacaag
tgaattttatagaggcagatagcagattagattatttgacaggttatctg
gtaagaacatctcaggttccttgacagaactcgtgattttatggggtaga
aaaatgtggttgaatcaacggtggaatttttttagccaaacaaaaaaaca
ctttactttggaaccttaatacaaaattattgaatgtaaaacatcttaca
catggaaaacaaacagttccttgggaaataaaaccttattttaaaggttc
cattcggccttata
gaattcacttaaatctttatgaccacacatccctggatgaggagaatttt
ctgtttccaaaaaatatgtaactactcataaaatacttttggggcacaca
tatgagtcattaaatcttaacaagactataaaataaaacttctgccttcc
ctatagtagtggaaaattccaccatgttccttcaatgttgtgtagagtat
gttttcatcagaatgtctcaagctagtagaatgtgaggagcttccataaa
accacttcttagagaattgtaccatcttagggtgagaccgagagagtgtt
gtattgctcatgtaaggttctaccaatgcctttgaattagtgacggctaa
tgaaaatctttcttgtgttgattctattagtaaatagttcaggcttttgc
ttggttttacttgcttttatttatttttatgttatttcttaatattttat
tttttcattcacaatttcatacgttatatgtacgatgtgccttgatcata
tatacccaaaattaactcccttctctctctctccttaaatcttctatcca
tatataacccacccaccttcatgttatttataaaataactcactgaatcc
atttaaaactgcttacatgtgcacaggtttggtctacccattggagtcta
ggtaacctaaaaagggcacattcttgaataaaatgctcttttcctttctc
agaagtcatcagctacctttagttcttctagggcctattaaattaaacta
attgcttttggtaatgcctttttatgattttaatttattttttcatagtg
tgtacataatcatgtttcccctaaccaactcttcccagatcctccatgcc
tctctgaacacacaatgtcatattcattccctcactgcaaacaaagaaaa
taagtgaagatagaagcaatcaaacaactaagccaattaagtttatgtta
tattccaaatttcagcacactcttttctagcactttaattttagtattat
tttctccagcactagagaagttttctgtagccacagaatcagtattagaa
agatcatggctaaattacttttaagtacaagcataggcatggcatacagt
aggattaaaaaccacatgtaacgtttacagaatggctccacatgtgttct
tatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_85751687_85752895
seq2: B6Ng01-087E22.b_45_1258 (reverse)

seq1  TATAAGACAGAATGGAAACTTTTTAAAAATAAGTATTTATTTCCCAAGGA  50
      |||||| | |||||||| ||||   ||||||||  |||||||||||||||
seq2  TATAAGGCCGAATGGAACCTTT---AAAATAAGGTTTTATTTCCCAAGGA  47

seq1  ACTGTTTGTTTTTCCATGTGTGAGATGTTTTACAT--CATAATTTTGTTA  98
      |||||||| |||||||||||| |||||||||||||   ||||||||||  
seq2  ACTGTTTG-TTTTCCATGTGTAAGATGTTTTACATTCAATAATTTTGTAT  96

seq1  TAAGGT--CAAAGTAAGTTG--TTTCTGTTT-GCTACAAAA--TTCACGT  141
      ||||||  ||||||||  ||  ||| ||||| |||| ||||  | |||  
seq2  TAAGGTTCCAAAGTAAAGTGTTTTTTTGTTTGGCTAAAAAAATTCCACCG  146

seq1  TTGATTCA--CACA-TCTTCTACCCCAATAAAATCACGAGTTCTGTCAAG  188
      ||||||||  |||| | ||||||||| |||||||||||||||||||||||
seq2  TTGATTCAACCACATTTTTCTACCCC-ATAAAATCACGAGTTCTGTCAAG  195

seq1  GAACCTTGAGATGTTCTTACCAGATAACCTGTCAAATAATCTAATCTGCT  238
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACC-TGAGATGTTCTTACCAGATAACCTGTCAAATAATCTAATCTGCT  244

seq1  ATCTGCCTCTATAAAATTCACTTGTGAAATGATTGTGTTACAAAACTCCT  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCCTCTATAAAATTCACTTGTGAAATGATTGTGTTACAAAACTCCT  294

seq1  AGTTTATATTTTTTTCCCTATAAAAGTAGGACTAATATTTAACCAACACT  338
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AG-TTATATTTTTTTCCCTATAAAAGTAGGACTAATATTTAACCAACACT  343

seq1  GTACTCTCAAGTCCCCCTTTGGAGAGCCAGTCCTATGCTTAGTAAATAAA  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCTCAAGTCCCCCTTTGGAGAGCCAGTCCTATGCTTAGTAAATAAA  393

seq1  GATTACTTAATTAATTTAACTTTGGGTGTTAGTTTTGTTCTCACTCAGGA  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACTTAATTAATTTAACTTTGGGTGTTAGTTTTGTTCTCACTCAGGA  443

seq1  TGATTAACAGAATTGCAGCTTTTTTTCAACTGCTGAACAACTGCTTAAAC  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAACAGAATTGCAGCTTTTTTTCAACTGCTGAACAACTGCTTAAAC  493

seq1  TGTTTTCAGCAGGAAAACAAACAATGGCAGATATGATTTTCATACTTTCT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCAGCAGGAAAACAAACAATGGCAGATATGATTTTCATACTTTCT  543

seq1  ATATAATTAATTATGATGAATATTTGAAATTAGTGTGACAAGTAACATTA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATTAATTATGATGAATATTTGAAATTAGTGTGACAAGTAACATTA  593

seq1  TCTCACCAGTATTTTTATATACCAGTGACTAAGACATTAGGCACTTAACA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCAGTATTTTTATATACCAGTGACTAAGACATTAGGCACTTAACA  643

seq1  TGGAATAGCTATTGTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATAGCTATTGTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  693

seq1  GTGTGTGTGTTGGAGTCAAAAGTATAGCATTAGCACTGCTAGAAGATAGA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTTGGAGTCAAAAGTATAGCATTAGCACTGCTAGAAGATAGA  743

seq1  AAGTAAAATTTGTTTCTTACAGATAAAAAAGAATTTAGGGTAATTAAGTG  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAATTTGTTTCTTACAGATAAAAAAGAATTTAGGGTAATTAAGTG  793

seq1  CTTTTGTAAAAGACAGCAAGAGTTAGGTTTCAAATTAAAATACTATCCTC  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTAAAAGACAGCAAGAGTTAGGTTTCAAATTAAAATACTATCCTC  843

seq1  TTAGATATTACTTGGATAAATCTGAAAATACCCTGACAGAAGAATGCATT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATATTACTTGGATAAATCTGAAAATACCCTGACAGAAGAATGCATT  893

seq1  ATATTTATATGGAAATCACTTATGAGGAAATACCATTCAAAACATCTTGG  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATATGGAAATCACTTATGAGGAAATACCATTCAAAACATCTTGG  943

seq1  TAAAGATATCAAGCAATAAGTATGGGATCTAATATCAGATTGAGAATTGT  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATATCAAGCAATAAGTATGGGATCTAATATCAGATTGAGAATTGT  993

seq1  CCACAAGAAAAAAATGGGGCCAGGAAATCCACTTGATTTTATTTGATTCA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAGAAAAAAATGGGGCCAGGAAATCCACTTGATTTTATTTGATTCA  1043

seq1  TAGACTTTCATTCACATCTCTCTCAAAATCTTATATTTTAGGGAAATAAT  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTTTCATTCACATCTCTCTCAAAATCTTATATTTTAGGGAAATAAT  1093

seq1  TAATAAAATTTTCACAATTTTAATAAAATATCTCTCCTCCTATATTCAAA  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAATTTTCACAATTTTAATAAAATATCTCTCCTCCTATATTCAAA  1143

seq1  AGCATCATTGATATATGTTTTGGGTTTTATGGGATTTTGACAACTATAAT  1188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCATTGATATATGTTTTGGGTTTTATGGGATTTTGACAACTATAAT  1193

seq1  CTTCATTTGTCAAAAGAATTC  1209
      |||||||||||||||||||||
seq2  CTTCATTTGTCAAAAGAATTC  1214

seq1: chr2_85614119_85615286
seq2: B6Ng01-087E22.g_67_1220

seq1  GAATTCACTTAAATCTTTATGACCACACATCCCTGGATGAGGAGAATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTAAATCTTTATGACCACACATCCCTGGATGAGGAGAATTTT  50

seq1  CTGTTTCCAAAAAATATGTAACTACTCATAAAATACTTTTGGGGCACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCCAAAAAATATGTAACTACTCATAAAATACTTTTGGGGCACACA  100

seq1  TATGAGTCATTAAATCTTAACAAGACTATAAAATAAAACTTCTGCCTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGTCATTAAATCTTAACAAGACTATAAAATAAAACTTCTGCCTTCC  150

seq1  CTATAGTAGTGGAAAATTCCACCATGTTCCTTCAATGTTGTGTAGAGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGTAGTGGAAAATTCCACCATGTTCCTTCAATGTTGTGTAGAGTAT  200

seq1  GTTTTCATCAGAATGTCTCAAGCTAGTAGAATGTGAGGAGCTTCCATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCATCAGAATGTCTCAAGCTAGTAGAATGTGAGGAGCTTCCATAAA  250

seq1  ACCACTTCTTAGAGAATTGTACCATCTTAGGGTGAGACCGAGAGAGTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTTCTTAGAGAATTGTACCATCTTAGGGTGAGACCGAGAGAGTGTT  300

seq1  GTATTGCTCATGTAAGGTTCTACCAATGCCTTTGAATTAGTGACGGCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGCTCATGTAAGGTTCTACCAATGCCTTTGAATTAGTGACGGCTAA  350

seq1  TGAAAATCTTTCTTGTGTTGATTCTATTAGTAAATAGTTCAGGCTTTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATCTTTCTTGTGTTGATTCTATTAGTAAATAGTTCAGGCTTTTGC  400

seq1  TTGGTTTTACTTGCTTTTATTTATTTTTATGTTATTTCTTAATATTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTACTTGCTTTTATTTATTTTTATGTTATTTCTTAATATTTTAT  450

seq1  TTTTTCATTCACAATTTCATACGTTATATGTACGATGTGCCTTGATCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATTCACAATTTCATACGTTATATGTACGATGTGCCTTGATCATA  500

seq1  TATACCCAAAATTAACTCCCTTCTCTCTCTCTCCTTAAATCTTCTATCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCCAAAATTAACTCCCTTCTCTCTCTCTCCTTAAATCTTCTATCCA  550

seq1  TATATAACCCACCCACCTTCATGTTATTTATAAAATAACTCACTGAATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAACCCACCCACCTTCATGTTATTTATAAAATAACTCACTGAATCC  600

seq1  ATTTAAAACTGCTTACATGTGCACAGGTTTGGTCTACCCATTGGAGTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAACTGCTTACATGTGCACAGGTTTGGTCTACCCATTGGAGTCTA  650

seq1  GGTAACCTAAAAAGGGCACATTCTTGAATAAAATGCTCTTTTCCTTTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACCTAAAAAGGGCACATTCTTGAATAAAATGCTCTTTTCCTTTCTC  700

seq1  AGAAGTCATCAGCTACCTTTAGTTCTTCTAGGGCCTATTAAATTAAACTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTCATCAGCTACCTTTAGTTCTTCTAGGGCCTATTAAATTAAACTA  750

seq1  ATTGCTTTTGGTAATGCCTTTTTATGATTTTAATTTATTTTTTCATAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTTTGGTAATGCCTTTTTATGATTTTAATTTATTTTTTCATAGTG  800

seq1  TGTACATAATCATGTTTCCCCTAACCAACTCTTCCCAGATCCTCCATGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATAATCATGTTTCCCCTAACCAACTCTTCCCAGATCCTCCATGCC  850

seq1  TCTCTGAACACACAATGTCATATTCATTCCCTCACTGCAAAACAAAAAGA  900
      ||||||||||||||||||||||||||||||||||||||||   | |||||
seq2  TCTCTGAACACACAATGTCATATTCATTCCCTCACTGCAA---ACAAAGA  897

seq1  AAATAAGTGAAGATAGAAGCAAATCAAAACAACTAAGCCAATTAAGTTTA  950
      |||||||||||||||||||| |||| ||||||||||||||||||||||||
seq2  AAATAAGTGAAGATAGAAGC-AATC-AAACAACTAAGCCAATTAAGTTTA  945

seq1  TGTTATATTCCAAAATTTTCAGCACACTCTTTTCTAGCACTTTAATTTTA  1000
      ||||||||||||||  ||||||||||||||||||||||||||||||||||
seq2  TGTTATATTCCAAA--TTTCAGCACACTCTTTTCTAGCACTTTAATTTTA  993

seq1  GTATTATTTTTCTCCAGCACTAGGAGAAGTTTTCTGTAGCCACAG-ATCA  1049
      |||||| ||||||||||||||| |||||||||||||||||||||| ||||
seq2  GTATTA-TTTTCTCCAGCACTA-GAGAAGTTTTCTGTAGCCACAGAATCA  1041

seq1  GTA-TAGAAAGATCATGGCTAAATTTACTTTTAAGTACAAAGCATAGCAA  1098
      ||| ||||||||||||||||||| |||||||||||||| ||||||||  |
seq2  GTATTAGAAAGATCATGGCTAAA-TTACTTTTAAGTAC-AAGCATAGGCA  1089

seq1  TTGGCATACAGTAAGAATTAAAAACACATTGTAACGGTTTTTACAAGATG  1148
       |||||||||||| || | |||| |||| |||||||   ||||||  |||
seq2  -TGGCATACAGTAGGATTAAAAACCACA-TGTAACG---TTTACAGAATG  1134

seq1  GCT-CACATGTGTTCATTATT  1168
      ||| ||||||||||| |||||
seq2  GCTCCACATGTGTTC-TTATT  1154