BAC Information

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BAC

Clone NameB6Ng01-087N16
Chromosome2 (Build37)
Map Location 133,388,735 - 133,389,918
singlet/doubletsinglet
Overlap genenone
Upstream genePrei4, LOC100043781, LOC383801, LOC668906, Chgb, 3300001M20Rik, Mcm8, Crls1, B430119L13Rik, 5830467P10Rik, LOC668908, LOC100043785, A430048G15Rik, Bmp2
Downstream geneHao1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087N16.bB6Ng01-087N16.g
ACCDH900864DH900865
length1,1711,055
definitionDH900864|Mus musculus domesticus DNA, BAC clone: B6Ng01-087N16, 5' end.DH900865|Mus musculus domesticus DNA, BAC clone: B6Ng01-087N16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaagcaaaccccagttggaccaaaggacttaccaatgagttagt
agttttcataagggggcggggggagtgagagaaagccaatgcctaaatca
aagcaaagtttgcagaacccaaggtaaagttccagagatgatatatcata
caacagaggccacagtgcctaaaaaaattaaagaatgtctgatcagcgtc
tcagcacatctaccaattggccagatgctcaaacagagtgaagtcagatg
aggttctggaaagtgagtcctctatgatggcagagctttggtgctcaggt
tggaagcaaaacctagggagggagggctttgtggctgtttgcagattggg
gaatccagtgctagttcctggcagggtttcaggtcagtttccggagtgtg
tgtcctgtagccctccgtcatggttgaagcccaggtctcacctcctctcc
tgacccgtgccttagaactgacttggaaagcggtgtgcttacagcaagac
agactgttataattaaattcttcccaaggacctccgtgcaatgaccccaa
gcacacttaccttcggaaaccttaaggttctgaagatcttgttttaaatg
actaccctggttagcttttgatgtgttccttatccctttagttgttgcac
aggtagaaacgattagacccaactatgggtagccttgtcctcctggtcct
tcagtcattctctaatgtctcttgcttgccatgggcactgtaacaaactg
caatcttaacatcttataaaatgaatgaaccacatatttacatctccaag
tcctccagatgggagtgcgatcattccataaggatcccaccttctggcag
gtctatccagtacatattttctgcttcattggtcttgattttcttggcta
aaattacttgtagcacagcagccccatgtgacatatagtatatacataca
tgtatgtgcatatagtgtgtacatgttctaattatacatagctatgtgaa
gatatgtacatatgtagatggtcgcacttctgatttccatttaggtcaga
ggaagacgtcacagtaaatggagctaggtcatggtatataccccgagtgg
ttcaggtgttctctctatttttagatggaaaacctcatctggtacatatc
gaatgagcgatcactaagcaa
gaattctcaccttaggaatactgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgaggatgtggagaaagaggaacactcctccattgttggtg
gaattgcaagcttgtacaaccactctagaaatcagtctgatggttcgtca
gaaaattggacatagtattactggaggatcccgcaatacctctcctaggc
atattttcagaagatgttccaaccagtaataaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactacttagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggaaggcatcatcctgagtgaggtcacccaatcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccagaaac
ttagaatacccaagatataagatacaatttgctaaacacatgaaactcaa
gaagaacgaagaccaaagtgtggacactttgcccattcttagaattggga
acaaaacaccccattgaaggaatttacagatacagtttggagctgaaatg
aaaaggatggaccatctagagactgccatatcccagggatccatcccata
aatcagcttccaaacgctgacaccatttgcatacactagcaagatttttg
ctgaaaggacacagatatagctgttctcttgtgagactatgccgggccta
gcaaacacagaagtggatgctcacagtcagctattggatggatcacaggg
cccccatggagagcttagagaagtaccaggagctaagggacttgcaaccc
tataggtggaacacatttgactcccagtactcccaaagctctgttctctt
accgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_133388735_133389918
seq2: B6Ng01-087N16.b_48_1218

seq1  GAATTCTAAGCAAACCCCAGTTGGACCAAAGGACTTACCAATGAGTTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGCAAACCCCAGTTGGACCAAAGGACTTACCAATGAGTTAGT  50

seq1  AGTTTTCATAAGGGGGCGGGGGGAGTGAGAGAAAGCCAATGCCTAAATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCATAAGGGGGCGGGGGGAGTGAGAGAAAGCCAATGCCTAAATCA  100

seq1  AAGCAAAGTTTGCAGAACCCAAGGTAAAGTTCCAGAGATGATATATCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAGTTTGCAGAACCCAAGGTAAAGTTCCAGAGATGATATATCATA  150

seq1  CAACAGAGGCCACAGTGCCTAAAAAAATTAAAGAATGTCTGATCAGCGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGAGGCCACAGTGCCTAAAAAAATTAAAGAATGTCTGATCAGCGTC  200

seq1  TCAGCACATCTACCAATTGGCCAGATGCTCAAACAGAGTGAAGTCAGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCACATCTACCAATTGGCCAGATGCTCAAACAGAGTGAAGTCAGATG  250

seq1  AGGTTCTGGAAAGTGAGTCCTCTATGATGGCAGAGCTTTGGTGCTCAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCTGGAAAGTGAGTCCTCTATGATGGCAGAGCTTTGGTGCTCAGGT  300

seq1  TGGAAGCAAAACCTAGGGAGGGAGGGCTTTGTGGCTGTTTGCAGATTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCAAAACCTAGGGAGGGAGGGCTTTGTGGCTGTTTGCAGATTGGG  350

seq1  GAATCCAGTGCTAGTTCCTGGCAGGGTTTCAGGTCAGTTTCCGGAGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCAGTGCTAGTTCCTGGCAGGGTTTCAGGTCAGTTTCCGGAGTGTG  400

seq1  TGTCCTGTAGCCCTCCGTCATGGTTGAAGCCCAGGTCTCACCTCCTCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGTAGCCCTCCGTCATGGTTGAAGCCCAGGTCTCACCTCCTCTCC  450

seq1  TGACCCGTGCCTTAGAACTGACTTGGAAAGCGGTGTGCTTACAGCAAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCGTGCCTTAGAACTGACTTGGAAAGCGGTGTGCTTACAGCAAGAC  500

seq1  AGACTGTTATAATTAAATTCTTCCCAAGGACCTCCGTGCAATGACCCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTTATAATTAAATTCTTCCCAAGGACCTCCGTGCAATGACCCCAA  550

seq1  GCACACTTACCTTCGGAAACCTTAAGGTTCTGAAGATCTTGTTTTAAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACTTACCTTCGGAAACCTTAAGGTTCTGAAGATCTTGTTTTAAATG  600

seq1  ACTACCCTGGTTAGCTTTTGATGTGTTCCTTATCCCTTTAGTTGTTGCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCCTGGTTAGCTTTTGATGTGTTCCTTATCCCTTTAGTTGTTGCAC  650

seq1  AGGTAGAAACGATTAGACCCAACTATGGGTAGCCTTGTCCTCCTGGTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGAAACGATTAGACCCAACTATGGGTAGCCTTGTCCTCCTGGTCCT  700

seq1  TCAGTCATTCTCTAATGTCTCTTGCTTGCCATGGGCACTGTAACAAACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCATTCTCTAATGTCTCTTGCTTGCCATGGGCACTGTAACAAACTG  750

seq1  CAATCTTAACATCTTATAAAATGAATGAACCACATATTTACATCTCCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTTAACATCTTATAAAATGAATGAACCACATATTTACATCTCCAAG  800

seq1  TCCTCCAGATGGGAGTGCGATCATTCCATAAGGATCCCACCTTCTGGCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCAGATGGGAGTGCGATCATTCCATAAGGATCCCACCTTCTGGCAG  850

seq1  GTCTATCCAGTACATATTTTCTGCTTCATTGGTCTTGATTTTCTTGGCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATCCAGTACATATTTTCTGCTTCATTGGTCTTGATTTTCTTGGCTA  900

seq1  AAATTACTTGTAGCACAGCAGGCCCCATGTGACATATAGGTATATACATA  950
      |||||||||||||||||||| ||||||||||||||||| |||||||||||
seq2  AAATTACTTGTAGCACAGCA-GCCCCATGTGACATATA-GTATATACATA  948

seq1  CATGTATGTGCATATAGTGTGTACATGTTCTAATTTATACATAGCTATGT  1000
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CATGTATGTGCATATAGTGTGTACATGTTCTAA-TTATACATAGCTATGT  997

seq1  GAAGATTATGTTACATATGTAGATGGTCGCACTTCTGATTTCCATTTAGG  1050
      ||||| |||| |||||||||||||||||||||||||||||||||||||||
seq2  GAAGA-TATG-TACATATGTAGATGGTCGCACTTCTGATTTCCATTTAGG  1045

seq1  TTCAGAGAGAGACGTCACAGTAAATGGAGCTATGTCATTGGTATATACCC  1100
       ||||||  ||||||||||||||||||||||| |||| ||||||||||||
seq2  -TCAGAGGAAGACGTCACAGTAAATGGAGCTAGGTCA-TGGTATATACCC  1093

seq1  CGAGTGGTTCAGGTGTTCTCTCTATTTTTTTAAGATGGAGAACACTCATC  1150
      |||||||||||||||||||||||||||||   ||||||| ||| ||||||
seq2  CGAGTGGTTCAGGTGTTCTCTCTATTTTT---AGATGGAAAAC-CTCATC  1139

seq1  T-GTAC-TATCGAAAATGAGCCAAATCACTTAGCAA  1184
      | |||| |||||  |||||||   |||||| |||||
seq2  TGGTACATATCG--AATGAGC--GATCACTAAGCAA  1171