BAC Information

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BAC

Clone NameB6Ng01-087P14
Chromosome2 (Build37)
Map Location 67,433,788 - 67,579,939
singlet/doubletdoublet
Overlap geneLOC621171
Upstream geneScn9a, Scn7a, LOC383707, LOC100039540, Gm1322, Cmya3
Downstream geneLOC227995, B3galt1, Stk39, LOC100039683, Gm1323, 4933409G03Rik, 4932414N04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087P14.bB6Ng01-087P14.g
ACCDH900954DH900955
length858365
definitionDH900954|Mus musculus domesticus DNA, BAC clone: B6Ng01-087P14, 5' end.DH900955|Mus musculus domesticus DNA, BAC clone: B6Ng01-087P14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,433,788 - 67,434,649)(67,579,569 - 67,579,939)
sequence
gaattcatcattctggcaaaaagtacccatttccattttgtgacaattgt
actatcttcaaaacaatgcctttattttcctgttcccggtcatttttttc
tttttgtaaaatgaaggcaaagcaatatgaaacattattatggttcctga
agctatcattgctgcataggaaaaaagaaaaaaaaaactctatgtgaggc
attggtgcgcatctcaggcaggcagcaaggttttccttctgttcagttgc
ttgaaacattgcttcagcagtagaggttatggaggtcagaaaaagtaaag
gatagaaaatatcagtattcaaggtataaaactgaatgttgaatgggtgt
tggatatgtggaaaggggatttttagtgattaaagtatatcccaaacgca
gatgagtgtgggtcctgtatcattggaggtaaaaagccagtgtatgctta
atttattcaaaagaatcaatttaattgttttgagtaggttgatatttaat
gcatgtttggctaaatggatgaatggagtccttcagcaaggaggtcttgt
tgattgttctgaagcagggtctcattatatgcccctgcttggtctagaac
tttcgatgtagacttgccttgaactaataaaaatccccttgcctctgcct
tctgagccatgggaatgcatgcttttgttaaaaatggaaattccttagaa
acttagcaggtgagcaagatagttattcacatgcttgaaggattgaaggt
ttattattattattattattattattataattattattattattattata
tactttgattatactgttttctcagcctaacatggaacttgggttgtcca
tccatttg
tttacaacaggaaaagattccctagtttccatagaaatagagaggtcaca
ggctctatgagggctgcacagtcttctcaactatattgaagttatgtgaa
aagactttggaatgtaccagaagaacaccgggcttcttcactgaaaaaaa
tgagatgtgactccacactattttcaagttttatgaaagactgattgcca
ttaactttctattggttgaattacacataaaaggtagcaattaaagtgaa
gcttatccaccaagatgagaaatctttcttctggaaggacaatcgctgct
gctgctgctgctgctgctgttgttgttgttgttgttgttgttttggttgg
ttggttggttggttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_67433788_67434649
seq2: B6Ng01-087P14.b_49_906

seq1  GAATTCATCATTCTGGCAAAAAGTACCCATTTCCATTTTGTGACAATTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCATTCTGGCAAAAAGTACCCATTTCCATTTTGTGACAATTGT  50

seq1  ACTATCTTCAAAACAATGCCTTTATTTTCCTGTTCCCGGTCATTTTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCTTCAAAACAATGCCTTTATTTTCCTGTTCCCGGTCATTTTTTTC  100

seq1  TTTTTGTAAAATGAAGGCAAAGCAATATGAAACATTATTATGGTTCCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTAAAATGAAGGCAAAGCAATATGAAACATTATTATGGTTCCTGA  150

seq1  AGCTATCATTGCTGCATAGGAAAAAAGAAAAAAAAAACTCTATGTGAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATCATTGCTGCATAGGAAAAAAGAAAAAAAAAACTCTATGTGAGGC  200

seq1  ATTGGTGCGCATCTCAGGCAGGCAGCAAGGTTTTCCTTCTGTTCAGTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTGCGCATCTCAGGCAGGCAGCAAGGTTTTCCTTCTGTTCAGTTGC  250

seq1  TTGAAACATTGCTTCAGCAGTAGAGGTTATGGAGGTCAGAAAAAGTAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACATTGCTTCAGCAGTAGAGGTTATGGAGGTCAGAAAAAGTAAAG  300

seq1  GATAGAAAATATCAGTATTCAAGGTATAAAACTGAATGTTGAATGGGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAAAATATCAGTATTCAAGGTATAAAACTGAATGTTGAATGGGTGT  350

seq1  TGGATATGTGGAAAGGGGATTTTTAGTGATTAAAGTATATCCCAAACGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATGTGGAAAGGGGATTTTTAGTGATTAAAGTATATCCCAAACGCA  400

seq1  GATGAGTGTGGGTCCTGTATCATTGGAGGTAAAAAGCCAGTGTATGCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGTGTGGGTCCTGTATCATTGGAGGTAAAAAGCCAGTGTATGCTTA  450

seq1  ATTTATTCAAAAGAATCAATTTAATTGTTTTGAGTAGGTTGATATTTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTCAAAAGAATCAATTTAATTGTTTTGAGTAGGTTGATATTTAAT  500

seq1  GCATGTTTGGCTAAATGGATGAATGGAGTCCTTCAGCAAGGAGGTCTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTTTGGCTAAATGGATGAATGGAGTCCTTCAGCAAGGAGGTCTTGT  550

seq1  TGATTGTTCTGAAGCAGGGTCTCATTATATGCCCCTGCTTGGTCTAGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGTTCTGAAGCAGGGTCTCATTATATGCCCCTGCTTGGTCTAGAAC  600

seq1  TTTCGATGTAGACTTGCCTTGAACTAATAAAAATCCCCTTGCCTCTGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGATGTAGACTTGCCTTGAACTAATAAAAATCCCCTTGCCTCTGCCT  650

seq1  TCTGAGCCATGGGAATGCATGC-TTTGTTAAAAATGGAAATTCCTTAGAA  699
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCTGAGCCATGGGAATGCATGCTTTTGTTAAAAATGGAAATTCCTTAGAA  700

seq1  ACTTAGCAGGTGAGCAAGATAGTTATTCACATGCTTGAAGGATTGAAGGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGCAGGTGAGCAAGATAGTTATTCACATGCTTGAAGGATTGAAGGT  750

seq1  TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT  799
         |||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ---TTATTATTATTATTATTATTATTATTATAATTATTATTATTATTATT  797

seq1  ATATACTTTGATTATACTGTTTTCTCAGCCTTAACATTGGAGCTTGGTTT  849
      |||||||||||||||||||||||||||||| ||||| |||| ||||| ||
seq2  ATATACTTTGATTATACTGTTTTCTCAGCC-TAACA-TGGAACTTGGGTT  845

seq1  GTCCATCCATTTG  862
      |||||||||||||
seq2  GTCCATCCATTTG  858

seq1: chr2_67579569_67579939
seq2: B6Ng01-087P14.g_68_438 (reverse)

seq1  CAACCAACCAACCAACCAACCAAAACAACAACAACAACAACAACAACAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAACCAACCAACCAACCAAAACAACAACAACAACAACAACAACAGC  50

seq1  AGCAGCAGCAGCAGCAGCAGCGATTGTCCTTCCAGAAGAAAGATTTCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCAGCAGCAGCAGCAGCGATTGTCCTTCCAGAAGAAAGATTTCTCA  100

seq1  TCTTGGTGGATAAGCTTCACTTTAATTGCTACCTTTTATGTGTAATTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTGGATAAGCTTCACTTTAATTGCTACCTTTTATGTGTAATTCAA  150

seq1  CCAATAGAAAGTTAATGGCAATCAGTCTTTCATAAAACTTGAAAATAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAGAAAGTTAATGGCAATCAGTCTTTCATAAAACTTGAAAATAGTG  200

seq1  TGGAGTCACATCTCATTTTTTTCAGTGAAGAAGCCCGGTGTTCTTCTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCACATCTCATTTTTTTCAGTGAAGAAGCCCGGTGTTCTTCTGGT  250

seq1  ACATTCCAAAGTCTTTTCACATAACTTCAATATAGTTGAGAAGACTGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCCAAAGTCTTTTCACATAACTTCAATATAGTTGAGAAGACTGTGC  300

seq1  AGCCCTCATAGAGCCTGTGACCTCTCTATTTCTATGGAAACTAGGGAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTCATAGAGCCTGTGACCTCTCTATTTCTATGGAAACTAGGGAATC  350

seq1  TTTTCCTGTTGTAAAGAATTC  371
      |||||||||||||||||||||
seq2  TTTTCCTGTTGTAAAGAATTC  371