BAC Information

Click to search

BAC

Clone NameB6Ng01-088J07
Chromosome2 (Build37)
Map Location 142,776,656 - 142,777,180
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088J07.bB6Ng01-088J07.g
ACCDH901395DH901396
length9781,166
definitionDH901395|Mus musculus domesticus DNA, BAC clone: B6Ng01-088J07, 5' end.DH901396|Mus musculus domesticus DNA, BAC clone: B6Ng01-088J07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaccttcttgagttctttatatatgttggatattagtcccctat
ctgatttaggataggtaaagatcctttcccaatctgttggtggtcttttt
gtcttattgacggtgtcttttgccttgcagaaactttggagtttcattag
gtcccatttgtcaattctcgatcttacagcacaagccattgctgttctgt
tcaggaattttccccctgtgcccgtatcttcaaggcttttccccactttc
tcctctataagtttcagtgtctctggttttatgtgaagttccttgatcca
cttagatttgaccttagtacaaggagataagtatggatcgattcgcattc
ttctacacgataacaaccagttgtgccagcaccaattgttgaaaatgctg
tctttcttccactggatggttttagctcccttgtcgaagatcaagtgacc
ataggtgtgtgggttcatttctgggtcttcaattctattccattggtcta
cttgtctgtctctataccagtaccatgcagtttttatcacaattgctctg
tagtaaagctttaggtctggcatggtgattccgccagaagttcttttatc
cttgagaagactttttgctatcctaggttttttgttattccagacaaatt
tgcaaattgctccttccaattcgttgaagaattgagttggaattttgatg
gggattgcattgaatctgtagattgcttttggcaagatagccatttttac
aatgttgatcctgccaatccatgagcatgggagatctttccatcttctga
gatcttccttaatttctttcttcagagatttgaagttttatcatacagat
ctttcacttccttagttagagtcacgccaagatattttatattatttgtg
gctattgagaagggttgtttccctaatttctttctcagcctgtttattct
ttgtatagagaaggccattgacttgttt
gaattctcacctgaggaatacgaatgacagagaagcacctgaaaaaaaaa
tgtccaacatccttaatcatcagagaattgcaaatcaaaacaaccctgag
attccacctcacaccagtcagaatggctaagatcaaaaattcaggtgaca
gcagatgctggcgtggatgtggagaaagaggaacactcctccattgttgg
tgggatggcaggcttatacaaccactctggaaatcagtctggcagttcat
cagaaaattgtacatagtaataccggaggatccagcaatacatctcctgg
gcatatatccagaagataccccaactggtaagaaggacacatgctccact
atgttcatagcatccttatttataatagccagggctggaaagaacccaga
tgcccctcaacagagaaatggatacagaaaatatggtacatctacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctagcca
aatggatggacctggaatgcatcatcctgagtgaggtaacacattcacaa
agtaactcacacaatatgtactcactgataagtggatattaacccaaaac
ctaggatacctaagatataagatacaattttctaaacacatgaagctcaa
gaaaaatgaggactgaagtgtggacactatgcccctctttagatgtggga
acaaaactcccttggaaggagttacagaaacaaagtttagagctgagata
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaactttgacaccattgcgtacactagcaagattttattgaa
aggacccagatgtacctgtgacttgtgagactatgccggggcctagcaaa
cactgaagaggatgcccacagtcagctaatggatggatcacaggctccaa
tgtagagctagagaagtacccaggagctaaagggatctgcaccctatagg
tggaacaacatatgactcaacagttcccggagctcttgactctatctgca
tatgtatcaaagatggctagtcgcatcactgaaagagagctcattggaca
tgacacttaatgccagtacagaacgctcaggtctaaaggggatggggtgt
tatatgagaattggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776656_142777180
seq2: B6Ng01-088J07.b_53_577 (reverse)

seq1  TGCATGGTACTGGTATAGAGACAGACAAGTAGACCAATGGAATAGAATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGGTACTGGTATAGAGACAGACAAGTAGACCAATGGAATAGAATTG  50

seq1  AAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAG  100

seq1  GGAGCTAAAACCATCCAGAGGAAGAAAGACAGCATTTTCAACAATTGGTG  150
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTG  150

seq1  CTGGCACAACTGGTTGTTATCATGTAGAAGAATGGGAATCGATCCATACT  200
      ||||||||||||||||||||| |||||||||||| |||||||||||||||
seq2  CTGGCACAACTGGTTGTTATCGTGTAGAAGAATGCGAATCGATCCATACT  200

seq1  TATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATA  250

seq1  AAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGA  300

seq1  AGATATGGGCACAGGGGACAAATTCCTGAACAGAACAGCAATGGCTTGTG  350
      ||||| |||||||||||  |||||||||||||||||||||||||||||||
seq2  AGATACGGGCACAGGGGGAAAATTCCTGAACAGAACAGCAATGGCTTGTG  350

seq1  CTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTC  400

seq1  TGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTG  450

seq1  GGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACA  500

seq1  TATATAAAGAACTCAAGAAGGTGGA  525
      |||||||||||||||||||||||||
seq2  TATATAAAGAACTCAAGAAGGTGGA  525