BAC Information

Click to search

BAC

Clone NameB6Ng01-089K14
Chromosome2 (Build37)
Map Location 141,961,448 - 142,081,777
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC668913, LOC668914, Kif16b, Snrpb2, Otor, LOC668915
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089K14.bB6Ng01-089K14.g
ACCDH902184DH902185
length9941,132
definitionDH902184|Mus musculus domesticus DNA, BAC clone: B6Ng01-089K14, 5' end.DH902185|Mus musculus domesticus DNA, BAC clone: B6Ng01-089K14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,961,448 - 141,962,171)(142,080,631 - 142,081,777)
sequence
gaattctatctgtgtcttcttaatcactgataatttcttagctccagcta
tctagcaacactcctattcttgactttaaagccagagtcacatggctgaa
gctgttgtgttctgctgtttgatggggctggaacatgtcccccacccccc
atccccatttcattacattattgccagctttctgttttcaatgaatatgc
tctcctggaacttgctctctagactgacttttttcccccttttattaaat
attttctttattgacatttcaaattttatcccctttcctcatttcccatc
tgaaaacccccaccccatccactctccccctgctcagtaacccacctact
ccctcttccctgtcctggtattcccctatcctggggcattgagccttcac
aagtccaggggcctctcctcttattgaggtcccacaaggccatcctctgc
taaatatgggactgaagccttgagtccttgtgtactctttttttagtggt
ttagtccctgggagctctgagggtactggttggttcatattgttgttctt
cctttggggatccacaccccttcagttccttggatcctttctccagctcc
tccattggagaccctgggctaagtccaatggttggctgagagcatccact
tctgaatttgtcaggcactggcagagcctctcaagagatagctatatcaa
gctcctgtcagcaagcacttgttggcaaccacaacagtgtctgggtttga
taactgtatatgggatggaacagtcccataacccctaaagtaatagaagc
agtcattaatagttccccaaccaaaaagcacccaggaccagcggtttagt
ggagagttctatcagatcttcaaagaagacctaattccaactctcttcaa
ttattccacaaaatagaaacagaaagcacactactcaattcattctatga
agccacaattactcttgatacctaaaccacacaaagacccaaca
gaattcattacgctgatcaactgtagaactctgaaaaacataactaaatg
ggcggctgcattggaggctggctacttgcaactaattatttttttgtctt
aaaatttgtgaattcatgggcagagaaaatgtactcccaagggcaagtaa
aggcctgattttataattaattttggggagatctccaaaaacacttttgt
gaaaagagcaatgtagatcattaccttatctgaagatacaggaatggaat
ataaaatgtagttatatacagaggactgaaaataagaagctagcaatatg
aagtacaaatgatcataaggccttttgtccaggagcagcagctaactccc
ttctgtgtggacacaatatgtcttgttacttgtttgaccaaggggttaag
gtagaaatgatgtcttgagccttctgagctgcctcagagtgacagttctt
gctttctcctttgggaaagggagccataactgcaatgcagttcagactag
actaccctggacagagagggccatgggaccaagctgtgaggaagcaagac
ccattagggagacagtgttgcatcttctagtccatcccagctgcttgtag
gatgcagagttgccaccttagccaatgtcccagagcagaaagactgccgt
gccctctccatccctggcccacaagtaggcctaagttaccaacacttatg
atcttactgtgttttcagtgccaccccttggtgctgctcattcttttctg
gtttggtttgatttgagctttgagacagggtttcactctgtgtccagtct
ggccttgaccttgcagttttacgattgtatctcctgagtgctgggaaggt
aggcatgggctgttttgctacctgttcttcatgcaaaagcagacgtatga
gaatcctcctcgagggcggggagggggcttgactagcagagataaacaca
acccttgacttgagagaccattaccagatactctgaaagcatccaccgga
cagcatcactgttgaccaagatgcagtcaattatacctgagtatgtacag
ggatctatctcgttgtcagcttgcggggaacaagacaatttgatatagag
aagcacggactctcggtgtgttctttaatcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_141961448_141962171
seq2: B6Ng01-089K14.b_42_765

seq1  GAATTCTATCTGTGTCTTCTTAATCACTGATAATTTCTTAGCTCCAGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCTGTGTCTTCTTAATCACTGATAATTTCTTAGCTCCAGCTA  50

seq1  TCTAGCAACACTCCTATTCTTGACTTTAAAGCCAGAGTCACATGGCTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCAACACTCCTATTCTTGACTTTAAAGCCAGAGTCACATGGCTGAA  100

seq1  GCTGTTGTGTTCTGCTGTTTGATGGGGCTGGAACATGTCCCCCACCCCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTGTGTTCTGCTGTTTGATGGGGCTGGAACATGTCCCCCACCCCCC  150

seq1  ATCCCCATTTCATTACATTATTGCCAGCTTTCTGTTTTCAATGAATATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCATTTCATTACATTATTGCCAGCTTTCTGTTTTCAATGAATATGC  200

seq1  TCTCCTGGAACTTGCTCTCTAGACTGACTTTTTTCCCCCTTTTATTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGGAACTTGCTCTCTAGACTGACTTTTTTCCCCCTTTTATTAAAT  250

seq1  ATTTTCTTTATTGACATTTCAAATTTTATCCCCTTTCCTCATTTCCCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTTATTGACATTTCAAATTTTATCCCCTTTCCTCATTTCCCATC  300

seq1  TGAAAACCCCCACCCCATCCACTCTCCCCCTGCTCAGTAACCCACCTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACCCCCACCCCATCCACTCTCCCCCTGCTCAGTAACCCACCTACT  350

seq1  CCCTCTTCCCTGTCCTGGTATTCCCCTATCCTGGGGCATTGAGCCTTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTCCCTGTCCTGGTATTCCCCTATCCTGGGGCATTGAGCCTTCAC  400

seq1  AAGTCCAGGGGCCTCTCCTCTTATTGAGGTCCCACAAGGCCATCCTCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCAGGGGCCTCTCCTCTTATTGAGGTCCCACAAGGCCATCCTCTGC  450

seq1  TAAATATGGGACTGAAGCCTTGAGTCCTTGTGTACTCTTTTTTTAGTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATGGGACTGAAGCCTTGAGTCCTTGTGTACTCTTTTTTTAGTGGT  500

seq1  TTAGTCCCTGGGAGCTCTGAGGGTACTGGTTGGTTCATATTGTTGTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCCCTGGGAGCTCTGAGGGTACTGGTTGGTTCATATTGTTGTTCTT  550

seq1  CCTTTGGGGATCCACACCCCTTCAGTTCCTTGGATCCTTTCTCCAGCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGGGGATCCACACCCCTTCAGTTCCTTGGATCCTTTCTCCAGCTCC  600

seq1  TCCATTGGAGACCCTGGGCTAAGTCCAATGGTTGGCTGAGAGCATCCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGGAGACCCTGGGCTAAGTCCAATGGTTGGCTGAGAGCATCCACT  650

seq1  TCTGAATTTGTCAGGCACTGGCAGAGCCTCTCAAGAGATAGCTATATCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATTTGTCAGGCACTGGCAGAGCCTCTCAAGAGATAGCTATATCAA  700

seq1  GCTCCTGTCAGCAAGCACTTGTTG  724
      ||||||||||||||||||||||||
seq2  GCTCCTGTCAGCAAGCACTTGTTG  724

seq1: chr2_142080631_142081777
seq2: B6Ng01-089K14.g_67_1198 (reverse)

seq1  TGGATTTAAAGACACACCGAGAAGTCCCTAGCTTCTCATATTCAAAATTG  50
      |||||| ||  |||||||||| ||||| | ||||||| |||   ||||||
seq2  TGGATTAAAGAACACACCGAG-AGTCCGT-GCTTCTC-TATATCAAATTG  47

seq1  CTCTGTTCTCCGCAAGCTGAACAAACGGAGTAGAT-CCTGTACATACTCA  99
         ||||| |||||||||||   ||||   ||||| ||||||||||||||
seq2  TCTTGTTCCCCGCAAGCTGA--CAACGAGATAGATCCCTGTACATACTCA  95

seq1  GGTATTAATTGACTGCAGTCTTGTTC-ACAGTGGATGCTGTCCGGTGGAT  148
      |||| |||||||||||| ||||| || ||||| |||||||||||||||| 
seq2  GGTA-TAATTGACTGCA-TCTTGGTCAACAGT-GATGCTGTCCGGTGGA-  141

seq1  TGCTTTCAGAGTATCTTGGTAATGGGTCTCTCCAAGTTCTAGGGTTGTTG  198
      ||||||||||||||| ||||||| ||||||| |||| || ||||||||  
seq2  TGCTTTCAGAGTATC-TGGTAAT-GGTCTCT-CAAG-TCAAGGGTTGT--  185

seq1  TTTTATCTCTGCTAGTCAAGCCCCCCTCCCCGCCCTCGGGGAGGATTCTC  248
       ||||||||||||||||||| ||||||||||||||||| |||||||||||
seq2  GTTTATCTCTGCTAGTCAAG-CCCCCTCCCCGCCCTCGAGGAGGATTCTC  234

seq1  ATACGTCTGCTTTTGCATGAAGAACAGGTAGCAAAACAGCCCATGCCTAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGTCTGCTTTTGCATGAAGAACAGGTAGCAAAACAGCCCATGCCTAC  284

seq1  CTTCCCAGCACTCAGGAGATACAATCGTGAAAACTGCAAGGTCAAGGCCA  348
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTTCCCAGCACTCAGGAGATACAATCGT-AAAACTGCAAGGTCAAGGCCA  333

seq1  GACTGGACACAGAGTGAAACCCTGTCTCAAAGCTCAAATCAAACCAAACC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGACACAGAGTGAAACCCTGTCTCAAAGCTCAAATCAAACCAAACC  383

seq1  AGAAAAGAATGAGCAGCACCAAGGGGTGGCACTGAAAACACAGTAAGATC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAATGAGCAGCACCAAGGGGTGGCACTGAAAACACAGTAAGATC  433

seq1  ATAAGTGTTGGTAACTTAGGCCTACTTGTGGGCCAGGGATGGAGAGGGCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTGTTGGTAACTTAGGCCTACTTGTGGGCCAGGGATGGAGAGGGCA  483

seq1  CGGCAGTCTTTCTGCTCTGGGACATTGGCTAAGGTGGCAACTCTGCATCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCAGTCTTTCTGCTCTGGGACATTGGCTAAGGTGGCAACTCTGCATCC  533

seq1  TACAAGCAGCTGGGATGGACTAGAAGATGCAACACTGTCTCCCTAATGGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGCAGCTGGGATGGACTAGAAGATGCAACACTGTCTCCCTAATGGG  583

seq1  TCTTGCTTCCTCACAGCTTGGTCCCATGGCCCTCTCTGTCCAGGGTAGTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTTCCTCACAGCTTGGTCCCATGGCCCTCTCTGTCCAGGGTAGTC  633

seq1  TAGTCTGAACTGCATTGCAGTTATGGCTCCCTTTCCCAAAGGAGAAAGCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTGAACTGCATTGCAGTTATGGCTCCCTTTCCCAAAGGAGAAAGCA  683

seq1  AGAACTGTCACTCTGAGGCAGCTCAGAAGGCTCAAGACATCATTTCTACC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGTCACTCTGAGGCAGCTCAGAAGGCTCAAGACATCATTTCTACC  733

seq1  TTAACCCCTTGGTCAAACAAGTAACAAGACATATTGTGTCCACACAGAAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCCCTTGGTCAAACAAGTAACAAGACATATTGTGTCCACACAGAAG  783

seq1  GGAGTTAGCTGCTGCTCCTGGACAAAAGGCCTTATGATCATTTGTACTTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTAGCTGCTGCTCCTGGACAAAAGGCCTTATGATCATTTGTACTTC  833

seq1  ATATTGCTAGCTTCTTATTTTCAGTCCTCTGTATATAACTACATTTTATA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGCTAGCTTCTTATTTTCAGTCCTCTGTATATAACTACATTTTATA  883

seq1  TTCCATTCCTGTATCTTCAGATAAGGTAATGATCTACATTGCTCTTTTCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTCCTGTATCTTCAGATAAGGTAATGATCTACATTGCTCTTTTCA  933

seq1  CAAAAGTGTTTTTGGAGATCTCCCCAAAATTAATTATAAAATCAGGCCTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTGTTTTTGGAGATCTCCCCAAAATTAATTATAAAATCAGGCCTT  983

seq1  TACTTGCCCTTGGGAGTACATTTTCTCTGCCCATGAATTCACAAATTTTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGCCCTTGGGAGTACATTTTCTCTGCCCATGAATTCACAAATTTTA  1033

seq1  AGACAAAAAAATAATTAGTTGCAAGTAGCCAGCCTCCAATGCAGCCGCCC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAAAAATAATTAGTTGCAAGTAGCCAGCCTCCAATGCAGCCGCCC  1083

seq1  ATTTAGTTATGTTTTTCAGAGTTCTACAGTTGATCAGCGTAATGAATTC  1147
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTTATGTTTTTCAGAGTTCTACAGTTGATCAGCGTAATGAATTC  1132