BAC Information

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BAC

Clone NameB6Ng01-090B04
Chromosome2 (Build37)
Map Location 110,562,408 - 110,562,904
singlet/doubletsinglet
Overlap geneMuc15
Upstream geneBdnf, LOC100043427, Lin7c, Lgr4, Ccdc34, LOC668797, Bbox1, 1110018M03Rik, LOC668799, Slc5a12
Downstream geneLOC668802, LOC623270, LOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-090B04.bB6Ng01-090B04.g
ACCDH902474DH902475
length1,272491
definitionDH902474|Mus musculus domesticus DNA, BAC clone: B6Ng01-090B04, 5' end.DH902475|Mus musculus domesticus DNA, BAC clone: B6Ng01-090B04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagggaggggtaggtggcttttatcttaattggttggctctata
tctaaggatattccagagccattgctgggagttggtgagggctgaaaact
ttctggggaagcctggaaagtgttgttgacccattgcctttgcctcaggt
taggtgaaagggcagctgataataggggcagcttctgattagctgcccaa
agcctggtgtttttccaataactgacttgcctagatttgcccagttcttg
gaaacagagatctaggcctagtctcctgaactgccaatttgaagtctttc
atggagacagcctgtatcagtcctctcacttagatcatttagctcccaaa
taaaagacacaaaacctttatatttatatataaatttaaaaacactatag
gtggacagatacaactgtctgtgctattttgtcttttgcctgtgaatagt
ctcaagatataactggccatgttttgcctgggtcactcctactccaactg
gttgggtttcatggccatgtgctcaggatccacctaccccagagtgactt
ctttcttcttccatctccctcccctagtttttgcctcaggtcccaagcct
atttatggtgagaggattcaaaatttattcttataattattctgacttct
gatatgctattatcagaagtgcttattctaaagtacaatagaaagccacc
tttaattcttctatcatattgtaacattgtacctttcaggcaaaattatt
taaataccaattataaatcatgaagaataatagttcttacattggtattg
gtccttcacttttcatgtatttctctggaaagttaacatatgaacatgtt
tttatgctatgaaacttaatacgatttgaattccaacttcattacctatt
gtgacttggacatactaattatactcaatgaccttgttgtccttctctat
aaattgtgggcatactgttttctggacatcattgtgtgaaaacaacataa
gatgacttatgtgccttagttagggtttccatttctgtgaagaggaacca
tgaacagacgagtcttataaaggacaaacattcatttgtggctagctata
ggttaccaattgttcatcatccactcaaggtaggagcatgcagcttcagc
agcagaatgcatgaggatctgagagttgcactctaatctgaccgcacagg
agaaactaccttctgtactggggagagctcaggtttccacaacggagagt
gaatgcccccacaagaccgatg
ccagaaatttcagaaggctaagtccctcacagaaggcctcctgtggaatg
aggatttaaatagggtttgcagaagccattttcagcttgcttccctgacc
tactttcttttagattcatagaggctgtttctaaagacagtgaaatgtga
tagacatctaaacctcatgcctgggcatttggattcagaacatatctttt
gaacacacattctttctaagctttgtagtcatccacctactttttctcag
ttgtgaaattcatgactcgagtcccaaaatagcaagcaggatgtcattct
ctctctctctctctctctctctctctctctctctctctttctctctcttt
tctaatgtttatctgaatctcttaatagaatgatagaaaaaccttaggaa
atttcttacaaggaaaaatatcattctacctttctttaccaaatatatat
atatatatatatatatatatatatatatatatgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_110562408_110562904
seq2: B6Ng01-090B04.g_68_564

seq1  GAATTCCCAGAAATTTCAGAAGGCTAAGTCCCTCACAGAAGGCCTCCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGAAATTTCAGAAGGCTAAGTCCCTCACAGAAGGCCTCCTGT  50

seq1  GGAATGAGGATTTAAATAGGGTTTGCAGAAGCCATTTTCAGCTTGCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGAGGATTTAAATAGGGTTTGCAGAAGCCATTTTCAGCTTGCTTCC  100

seq1  CTGACCTACTTTCTTTTAGATTCATAGAGGCTGTTTCTAAAGACAGTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTACTTTCTTTTAGATTCATAGAGGCTGTTTCTAAAGACAGTGAA  150

seq1  ATGTGATAGACATCTAAACCTCATGCCTGGGCATTTGGATTCAGAACATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGATAGACATCTAAACCTCATGCCTGGGCATTTGGATTCAGAACATA  200

seq1  TCTTTTGAACACACATTCTTTCTAAGCTTTGTAGTCATCCACCTACTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGAACACACATTCTTTCTAAGCTTTGTAGTCATCCACCTACTTTT  250

seq1  TCTCAGTTGTGAAATTCATGACTCGAGTCCCAAAATAGCAAGCAGGATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTTGTGAAATTCATGACTCGAGTCCCAAAATAGCAAGCAGGATGT  300

seq1  CATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCT  350

seq1  CTCTTTTCTAATGTTTATCTGAATCTCTTAATAGAATGATAGAAAAACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTCTAATGTTTATCTGAATCTCTTAATAGAATGATAGAAAAACCT  400

seq1  TAGGAAATTTCTTACAAGGAAAAATATCATTCTACCTTTCTTTACCAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAATTTCTTACAAGGAAAAATATCATTCTACCTTTCTTTACCAAAT  450

seq1  ATATATATATATATATATATATATATATATATATATATGTGTGTGTG  497
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATATATATGTGTGTGTG  497