BAC Information

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BAC

Clone NameB6Ng01-090E07
Chromosome2 (Build37)
Map Location 60,015,661 - 60,136,878
singlet/doubletdoublet
Overlap geneLOC100039092, March7, Cd302, LOC625861, Ly75
Upstream genePkp4, LOC625354, 2310032F03Rik, LOC100038999, LOC100039016, Tanc1, Wdsub1, Baz2b, LOC667103, LOC667106, Ldha-ps
Downstream geneLOC100039176, Pla2r1, Itgb6, Rbms1, ENSMUSG00000075325
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-090E07.bB6Ng01-090E07.g
ACCDH902618DH902619
length849583
definitionDH902618|Mus musculus domesticus DNA, BAC clone: B6Ng01-090E07, 5' end.DH902619|Mus musculus domesticus DNA, BAC clone: B6Ng01-090E07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,015,661 - 60,016,509)(60,136,296 - 60,136,878)
sequence
gaattccctgaaaaagaagcaggagaaagcaagcttgggactggggtgat
ggttcagtgattaggaacatgttcttgctgaggacatgggtgccgttccc
agctcccacaaagcagcttacagctgcctctggctcccactccaggtgag
ccaacaccgcttcagcctctcctgttaataggtacacactcagggcacac
acatgcattcaagtaagccaaccacacacataaagtaaaaacaaccatct
tttttttaaaagaagaaaacgtgtatttcaggtataaaaacgtattagaa
agcttttatagttaaaatattgtggcattgacatatgaacagataggaga
ctataatataagggagattatttccagaaatgtatataagcatagaattg
gaaatttagtatgctttaaaagtactatccatgaagaataggagaaaaaa
aatacttctaataaagaatactgagaaattttcatagccaaaagcaaagc
cctcaagtggattaagggaatgaatgtaaaacaggaagtgaggtagggag
ccgagcgtgatggcgcacgcctttaagcccagcacttgggaggcagaggc
agaggtatttctgagttctaggccagcttggtcaacaagagtgagttcca
ggacagccagggctacgtggagaaaccctgtctcgaaaaaccaaaaaaaa
aaaaaacaaaaacaaaaaccaaaaaaccccaccaacaacaagaaacaaaa
acaggaagtgaggtaggaaaggcaagggagctctggctaacatccttccg
tcctctttcctctccttcctgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattcccaaatgaaactgttaaacagccaaattctgtataaagctcttc
taactaaaaatgggagctgccagagaatgggggaagacattgctttgagg
ataccctcccagtgtggtttattttacggtttccctgtgtagaagtgtga
aggtctatttcccatggttgcttagagaagcaacttgtggacaaaagact
gtcccttcggcttgagcagaaggaaagatctcccctgatgttggggaagg
catggccacaggcaggcagagcagcaggaagttgcctggtcacatttcca
tccacacacacaaagcagagaacaggaggaaatggtctaaggccacgccc
tccaagcctcccaaaggccagctcctccagcaaggccctgcctattaaag
gttacttaacttccccaaaggggctcagactgagatagtgtgtccaaatc
ctccagcctttaggggaagcgtctcattcaaaccagcacagctaccttgc
tgcctttctctcaggtcctataaaactttaatagtgaaatttgttttgtt
tttgttttttcctttgggggtagggggggttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_60015661_60016509
seq2: B6Ng01-090E07.b_49_897

seq1  GAATTCCCTGAAAAAGAAGCAGGAGAAAGCAAGCTTGGGACTGGGGTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGAAAAAGAAGCAGGAGAAAGCAAGCTTGGGACTGGGGTGAT  50

seq1  GGTTCAGTGATTAGGAACATGTTCTTGCTGAGGACATGGGTGCCGTTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCAGTGATTAGGAACATGTTCTTGCTGAGGACATGGGTGCCGTTCCC  100

seq1  AGCTCCCACAAAGCAGCTTACAGCTGCCTCTGGCTCCCACTCCAGGTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCCACAAAGCAGCTTACAGCTGCCTCTGGCTCCCACTCCAGGTGAG  150

seq1  CCAACACCGCTTCAGCCTCTCCTGTTAATAGGTACACACTCAGGGCACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACACCGCTTCAGCCTCTCCTGTTAATAGGTACACACTCAGGGCACAC  200

seq1  ACATGCATTCAAGTAAGCCAACCACACACATAAAGTAAAAACAACCATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCATTCAAGTAAGCCAACCACACACATAAAGTAAAAACAACCATCT  250

seq1  TTTTTTTAAAAGAAGAAAACGTGTATTTCAGGTATAAAAACGTATTAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAAAAGAAGAAAACGTGTATTTCAGGTATAAAAACGTATTAGAA  300

seq1  AGCTTTTATAGTTAAAATATTGTGGCATTGACATATGAACAGATAGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTATAGTTAAAATATTGTGGCATTGACATATGAACAGATAGGAGA  350

seq1  CTATAATATAAGGGAGATTATTTCCAGAAATGTATATAAGCATAGAATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAATATAAGGGAGATTATTTCCAGAAATGTATATAAGCATAGAATTG  400

seq1  GAAATTTAGTATGCTTTAAAAGTACTATCCATGAAGAATAGGAGAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTAGTATGCTTTAAAAGTACTATCCATGAAGAATAGGAGAAAAAA  450

seq1  AATACTTCTAATAAAGAATACTGAGAAATTTTCATAGCCAAAAGCAAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTCTAATAAAGAATACTGAGAAATTTTCATAGCCAAAAGCAAAGC  500

seq1  CCTCAAGTGGATTAAGGGAATGAATGTAAAACAGGAAGTGAGGTAGGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAGTGGATTAAGGGAATGAATGTAAAACAGGAAGTGAGGTAGGGAG  550

seq1  CCGAGCGTGATGGCGCACGCCTTTAAGCCCAGCACTTGGGAGGCAGAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGCGTGATGGCGCACGCCTTTAAGCCCAGCACTTGGGAGGCAGAGGC  600

seq1  AGAGGTATTTCTGAGTTCTAGGCCAGCTTGGTCAACAAGAGTGAGTTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTATTTCTGAGTTCTAGGCCAGCTTGGTCAACAAGAGTGAGTTCCA  650

seq1  GGACAGCCAGGGCTACGTGGAGAAACCCTGTCTCGAAAAACCAAAAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCCAGGGCTACGTGGAGAAACCCTGTCTCGAAAAACCAAAAAAAA  700

seq1  AAAAAACAAAAACAAAAACCAAAAAACCCCACCAACAACAAGAAACAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACAAAAACAAAAACCAAAAAACCCCACCAACAACAAGAAACAAAA  750

seq1  ACAGGAAGTGAGGTAGGAAAGGCAAGGGAGCTCTGGCTAACATCCTTCCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAGTGAGGTAGGAAAGGCAAGGGAGCTCTGGCTAACATCCTTCCG  800

seq1  TCCTCTTTCCTCTCCTTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  849
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTTCCTCTCCTTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  849

seq1: chr2_60136296_60136878
seq2: B6Ng01-090E07.g_68_650 (reverse)

seq1  TCAACCCCCCCTACCCCCAAAGGAAAAAACAAAAACAAAACAAATTTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCCCCCCTACCCCCAAAGGAAAAAACAAAAACAAAACAAATTTCAC  50

seq1  TATTAAAGTTTTATAGGACCTGAGAGAAAGGCAGCAAGGTAGCTGTGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAGTTTTATAGGACCTGAGAGAAAGGCAGCAAGGTAGCTGTGCTG  100

seq1  GTTTGAATGAGACGCTTCCCCTAAAGGCTGGAGGATTTGGACACACTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAATGAGACGCTTCCCCTAAAGGCTGGAGGATTTGGACACACTATC  150

seq1  TCAGTCTGAGCCCCTTTGGGGAAGTTAAGTAACCTTTAATAGGCAGGGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTGAGCCCCTTTGGGGAAGTTAAGTAACCTTTAATAGGCAGGGCC  200

seq1  TTGCTGGAGGAGCTGGCCTTTGGGAGGCTTGGAGGGCGTGGCCTTAGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGAGGAGCTGGCCTTTGGGAGGCTTGGAGGGCGTGGCCTTAGACC  250

seq1  ATTTCCTCCTGTTCTCTGCTTTGTGTGTGTGGATGGAAATGTGACCAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTCCTGTTCTCTGCTTTGTGTGTGTGGATGGAAATGTGACCAGGC  300

seq1  AACTTCCTGCTGCTCTGCCTGCCTGTGGCCATGCCTTCCCCAACATCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCCTGCTGCTCTGCCTGCCTGTGGCCATGCCTTCCCCAACATCAGG  350

seq1  GGAGATCTTTCCTTCTGCTCAAGCCGAAGGGACAGTCTTTTGTCCACAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATCTTTCCTTCTGCTCAAGCCGAAGGGACAGTCTTTTGTCCACAAG  400

seq1  TTGCTTCTCTAAGCAACCATGGGAAATAGACCTTCACACTTCTACACAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCTCTAAGCAACCATGGGAAATAGACCTTCACACTTCTACACAGG  450

seq1  GAAACCGTAAAATAAACCACACTGGGAGGGTATCCTCAAAGCAATGTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCGTAAAATAAACCACACTGGGAGGGTATCCTCAAAGCAATGTCTT  500

seq1  CCCCCATTCTCTGGCAGCTCCCATTTTTAGTTAGAAGAGCTTTATACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCATTCTCTGGCAGCTCCCATTTTTAGTTAGAAGAGCTTTATACAGA  550

seq1  ATTTGGCTGTTTAACAGTTTCATTTGGGAATTC  583
      |||||||||||||||||||||||||||||||||
seq2  ATTTGGCTGTTTAACAGTTTCATTTGGGAATTC  583