BAC Information

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BAC

Clone NameB6Ng01-091A05
Chromosome2 (Build37)
Map Location 87,371,075 - 87,372,224
singlet/doubletsinglet
Overlap geneOlfr253-ps1
Upstream geneOlfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1
Downstream geneOlfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091A05.bB6Ng01-091A05.g
ACCDH903161DH903162
length1,1261,253
definitionDH903161|Mus musculus domesticus DNA, BAC clone: B6Ng01-091A05, 5' end.DH903162|Mus musculus domesticus DNA, BAC clone: B6Ng01-091A05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattcaaggaacagtttcctatattcattctttcttccagtctat
aagtaaaaatattaaaaatttatttttattgctggatatcaacagtgtat
ttgtgaggtagattataattaactcatttctcatctaatgtatactataa
acatttctgaatcctgtttcttttctgcaacactttcttaaccttttttt
tcagtaacaaaatgaccaatatctgggatggacagtcaagaaactgaaac
tatccaccattagaggtccaggactttatacatattctctaatgtacaaa
aggtttaggttaactatttcattagatagatttagatatctaaatactca
tactcacttgatctttgtacaatatgaaataaaaacaaatgttagactca
agttatagttttagatattattttttctttaagacattaattattcaaat
cagtttagatattttattcttgattgttttagtattggtttagagatagt
cagtcagattgataactatggtaactaaacttgtttgattataaaaatgt
agaacacaaacatttactactaacaaataagatgtttagtcattttcatg
ttgtcttgttatattataaaatgtctttaatttaaataaacttataccac
ttctccctccctttccttaatccagctagacctgcttccttacatcaacc
aactttcatgccctcactcataaattgacagcaaaagtctattatgttgt
atgtatatatatatatatatatataatttataataaatatttataaataa
acataagtatagaatcttttaactttttttgtttgtatctatatggtttc
aaaatttgcaaattttcttggtctacatttcttgactctaccatttgctg
aaacataagatcaaacttatttgatctttgattctagatctatatgtttt
acagtagtactccttacccaacagtagcagtgtctgggaccatggatatg
gaattaatgagtagattcctaaaacagcagtatccagagattatcactac
agtgaattcagtatccagtttcatccaatgaagcagcaattcaataaagc
aataaagttctaaatcccctgctttg
gaattctccatttagctctgttccatatttttaatagggttatttggttc
tctgtagtctaacttcttgagatctttgtatatattgggtattagtcctt
tattaaatgtaggattgataaagttcttttcccaatatattggttgccat
tttgtcctattgacagtgttctttgctttatagaagctttgtaattttat
gatatattttatatattaaatattatgtatattacatataactattacat
atatatttatatactatatatttatatgcattacatattttatgatatat
tttatttacaatagctggaagctggaaacaacccagatgttcctcaacta
aagaaaagatatagaaaatgtggtacatttacacaatcgagtactgctca
gctattaaaaacaatgacttcatcttcatgaattttgcaggcaaatggat
ggacctaaaaatatcctgaatgtaatctcccagtcacaaaagaacacaca
tggtgtgctctcactgataagtggatattatgggggaaaaggcttggaat
accaacaatatgagtcatagaccatattcagctcaagaagaaggaagaca
aatatatggatgcttcagtcctactttgaagggtgaacaaataatcatag
gaggtagacgatgggagggacttgagaggaatagaggacttggagggaaa
agggagagctgatccggtatatatatacaggtcagatgtacagagggtca
ggaaattgaacagaggtgtgtagcaagggagagatggggaactgggaact
gggggtagccaccaggaagtcccagatgccagaaaatcaagaggcttcca
ggacacaatgaggatgacattggctgaaacacacaagaaagagagagata
cctgtagagaccatatccagaagttaggcattgtcctcatttgagggatg
gggcaccacccatctcaaattttaaatccagaattgttcctgctaaaata
aatacaggacaagagtcgaacattactgaggattgccaccccatagactc
ttcacctggggatcatctcatatgcagcacaaactgtggcgaacctatga
tgatgctaggaaactggctagaggcctgatgactctctcttctgaagtcg
tgcaagcctgacaatacaaagtggatgctgacgcctcgcaatgatcagac
ccaatgggaattgcgccagagctgagagtcgtaaaggaatgtcacctcct
aca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_87371075_87372224
seq2: B6Ng01-091A05.b_46_1171 (reverse)

seq1  CAAAGCAGGTGGATTTTAGAACATTTATTGTACTTAATTGAAATTGCTGG  50
      ||||||||| ||| |||||||| |||||||  ||| |||| |||||||| 
seq2  CAAAGCAGG-GGA-TTTAGAAC-TTTATTG--CTTTATTG-AATTGCTG-  43

seq1  TTTTCATTGTGATGAAAACTTGAGTACTGAAATTCAACTGTATGTGATAA  100
        ||||||| |||| ||||| || ||||| ||||| |||||| |||||||
seq2  -CTTCATTG-GATG-AAACTGGA-TACTG-AATTC-ACTGTA-GTGATAA  86

seq1  ATTCTTTGGATACTGCTTGTCTTTAGAAATCTAACTCATTAATTTCATTA  150
        ||| |||||||||| ||| ||||| ||||| ||||||||||| || ||
seq2  --TCTCTGGATACTGC-TGT-TTTAGGAATCT-ACTCATTAATTCCA-TA  130

seq1  TCCATTGGTACCAGAACACTGCTACTGTTGGGTAAGGAGTACTACTGTAA  200
      |||| |||| |||| |||||||||||||||||||||||||||||||||||
seq2  TCCA-TGGTCCCAG-ACACTGCTACTGTTGGGTAAGGAGTACTACTGTAA  178

seq1  AACATAATAGATTCTAGAATCAAAGATCAAATAAGTTTGATCTTATGTTT  250
      ||||| ||||| ||||||||||||||||||||||||||||||||||||||
seq2  AACAT-ATAGA-TCTAGAATCAAAGATCAAATAAGTTTGATCTTATGTTT  226

seq1  CAGCAAATGGTAGAGTCAAGAAATGTAGACCAAGAAAATTTGCAAATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAATGGTAGAGTCAAGAAATGTAGACCAAGAAAATTTGCAAATTTT  276

seq1  GAAACCATATAGATACAAACAAAAAAAGTTAAAAGATTCTATACTTATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCATATAGATACAAACAAAAAAAGTTAAAAGATTCTATACTTATGT  326

seq1  TTATTTATAAATATTTATTATAAATTATATATATATATATATATATACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATAAATATTTATTATAAATTATATATATATATATATATATACAT  376

seq1  ACAACATAATAGACTTTTGCTGTCAATTTATGAGTGAGGGCATGAAAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATAATAGACTTTTGCTGTCAATTTATGAGTGAGGGCATGAAAGTT  426

seq1  GGTTGATGTAAGGAAGCAGGTCTAGCTGGATTAAGGAAAGGGAGGGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGATGTAAGGAAGCAGGTCTAGCTGGATTAAGGAAAGGGAGGGAGAA  476

seq1  GTGGTATAAGTTTATTTAAATTAAAGACATTTTATAATATAACAAGACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTATAAGTTTATTTAAATTAAAGACATTTTATAATATAACAAGACAA  526

seq1  CATGAAAATGACTAAACATCTTATTTGTTAGTAGTAAATGTTTGTGTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAATGACTAAACATCTTATTTGTTAGTAGTAAATGTTTGTGTTCT  576

seq1  ACATTTTTATAATCAAACAAGTTTAGTTACCATAGTTATCAATCTGACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTTATAATCAAACAAGTTTAGTTACCATAGTTATCAATCTGACTG  626

seq1  ACTATCTCTAAACCAATACTAAAACAATCAAGAATAAAATATCTAAACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCTCTAAACCAATACTAAAACAATCAAGAATAAAATATCTAAACTG  676

seq1  ATTTGAATAATTAATGTCTTAAAGAAAAAATAATATCTAAAACTATAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAATAATTAATGTCTTAAAGAAAAAATAATATCTAAAACTATAACT  726

seq1  TGAGTCTAACATTTGTTTTTATTTCATATTGTACAAAGATCAAGTGAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTAACATTTGTTTTTATTTCATATTGTACAAAGATCAAGTGAGTA  776

seq1  TGAGTATTTAGATATCTAAATCTATCTAATGAAATAGTTAACCTAAACCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATTTAGATATCTAAATCTATCTAATGAAATAGTTAACCTAAACCT  826

seq1  TTTGTACATTAGAGAATATGTATAAAGTCCTGGACCTCTAATGGTGGATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACATTAGAGAATATGTATAAAGTCCTGGACCTCTAATGGTGGATA  876

seq1  GTTTCAGTTTCTTGACTGTCCATCCCAGATATTGGTCATTTTGTTACTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGTTTCTTGACTGTCCATCCCAGATATTGGTCATTTTGTTACTGA  926

seq1  AAAAAAAGGTTAAGAAAGTGTTGCAGAAAAGAAACAGGATTCAGAAATGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGGTTAAGAAAGTGTTGCAGAAAAGAAACAGGATTCAGAAATGT  976

seq1  TTATAGTATACATTAGATGAGAAATGAGTTAATTATAATCTACCTCACAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTATACATTAGATGAGAAATGAGTTAATTATAATCTACCTCACAA  1026

seq1  ATACACTGTTGATATCCAGCAATAAAAATAAATTTTTAATATTTTTACTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACTGTTGATATCCAGCAATAAAAATAAATTTTTAATATTTTTACTT  1076

seq1  ATAGACTGGAAGAAAGAATGAATATAGGAAACTGTTCCTTGAATGAATTC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACTGGAAGAAAGAATGAATATAGGAAACTGTTCCTTGAATGAATTC  1126