BAC Information

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BAC

Clone NameB6Ng01-091A14
Chromosome2 (Build37)
Map Location 113,404,232 - 113,517,422
singlet/doubletdoublet
Overlap geneFmn1
Upstream geneAven, Ryr3, 4930563P21Rik
Downstream geneGrem1, LOC100043520, Scg5, Arhgap11a, LOC100043526, Gja9, A530058N18Rik, Actc1, Aqr, Zfp770, Atpbd4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091A14.bB6Ng01-091A14.g
ACCDH903179DH903180
length1,090999
definitionDH903179|Mus musculus domesticus DNA, BAC clone: B6Ng01-091A14, 5' end.DH903180|Mus musculus domesticus DNA, BAC clone: B6Ng01-091A14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,516,318 - 113,517,422)(113,404,232 - 113,404,931)
sequence
gaattcaacagaaaaataagttataactgaatctgcacaagttaacttta
agtgtatagttgcccacattgaaccctcttatttatattacatataactt
tagatgcgaattcctactgtctttataaactaatcatgctacatattttt
gtgtcttgaccagacatgtgtccaatgtaaagatgatttcgagtacagct
cagtggtagagatcttgcctagcatgcatgagaccctggggcttgatctt
cctccacattccccaaaatggctttcaccacataaagagcaaactatgtt
ttttaaaaaggcgttatacaccataaaaatcaagactgattaagagagaa
aaatctagcagggcatctactcctttccagggatatttcttcttcattta
cattcatttacatccagtctccgctttgctgcttaaagcatcttgttaac
taatggatgccctccttctagaatacaattgcttagatgttcactcacaa
cagctagagcttcaccaaaatccctgcaagtgatcacagaggcccaccgt
ggccataactacgatttcagcagagccctgctcaatgtgatagagctgcg
taggctttgttcaggcagtatttccaataagagaaaatattggagaaact
gagattcgttcaccaaatgctatggagacactttgcacatgcgatctgtt
ctgccagcagaagataagagacggagtgttagtacagatgactgattata
actggagtcagtaaaagcaaacagggaaacggggcttggtgtaaaaggtg
actctactatttataggtgtgggtgggaaagcacctagtgtgagcttaat
ccagagccaacaacaacaattgcctccactctcagagaaggctttgatag
gaaaaacctgcacagctatggattaaaactgggttatggtaatgattgat
aagggattcaataagaatgaaagttgaagtggtattttttttgcagtctt
tattttttttctacatttacaatagaaatcctcatatagaacatagatgt
tgagggggaaaactcaagaaataaaatagcataaagattt
gaattctccgtaaatcttgaacatgctgcatgttacatatacaggacttc
ttcaaagttactattgaatgattcctgaggttagtaggcactgaggacat
cttgtctaggtttattccttcaatacaaatatacaagatattgatgtatg
attttagtcatttcttattcattaaatggaatataaccagagaaaaactc
tttttttttaattaggtatttttttcatttacatttccaatgctatacca
aaagtccccataccctccccccaacttccctacccacccactcccacttt
ttggccctggcgttcccctgtactgaggcatataaagtttgcaagaccaa
tgggcctctctttgcaatgatggccaactaggccatctttcgatacatat
gcagctagagacacgagctccagggggtactggttagttcatattgttat
tccacctatagggttgcagatccctttagctccttgggtactttctctag
ctcctccattgggagccctgtgatccacccaatagctgactatgagcatc
cacttctgtgtttgctaggccctggcatagcctcacaagagacagctata
tcaggtgcctttcagcaaaatcttgctagtgtatgcaatggtgtcagcgt
ttggaggctgattatgggatggatccccggggatggcagtctctagatgg
tccatcctttcatctcagctccaaactttgtctctgtaactccttccatg
ggtattttgttcccaattctaagaaggggcaaagtgtccacactttggtt
ttcattcttcttgagtttcatgtgttttgcaaattgtatcttgtatctta
ggtattctaagtttctgggctaatatccacttatcagtgagtacatatca
ttttgagttcttttgtgattgggttacctcactcaggatgatgcccttca
gatccatccatttgcctaggatttcataattcattcttttaatagctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_113516318_113517422
seq2: B6Ng01-091A14.b_40_1129 (reverse)

seq1  AAATCTTGTATGCTATTTTTATTTTCTTGAGTTTTTCCCCCCTCAAACAT  50
      ||||||| |||||||||||   |||||||||||||  ||||||| |||||
seq2  AAATCTT-TATGCTATTTT--ATTTCTTGAGTTTT--CCCCCTC-AACAT  44

seq1  CTAAATGTTCTATAATGAGGATTTCTTATTGTAAAATGTAGAAAAAAAAA  100
      ||  ||||||||| ||||||||||| |||||| |||||||| ||||||||
seq2  CT--ATGTTCTAT-ATGAGGATTTC-TATTGT-AAATGTAG-AAAAAAAA  88

seq1  TAAAGACTGCAAAAAAAAATACCACTTCAACTTTCATTCTTATTGAATCC  150
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TAAAGACTGC-AAAAAAAATACCACTTCAACTTTCATTCTTATTGAATCC  137

seq1  CTTATCAAATCATTACCATAACCCAGTTTTTAATCCATAGCTGTGCAGGT  200
      |||||| ||||||||||||||||||| |||||||||||||||||||||||
seq2  CTTATC-AATCATTACCATAACCCAG-TTTTAATCCATAGCTGTGCAGGT  185

seq1  TTTTCCTATCAAAGCCTTCTCTGAGAGTGGAGGCAATTGTTGTTGTTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTATCAAAGCCTTCTCTGAGAGTGGAGGCAATTGTTGTTGTTGGC  235

seq1  TCTGGATTAAGCTCACACTAGGTGCTTTCCCACCCACACCTATAAATAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATTAAGCTCACACTAGGTGCTTTCCCACCCACACCTATAAATAGT  285

seq1  AGAGTCACCTTTTACACCAAGCCCCGTTTCCCTGTTTGCTTTTACTGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCACCTTTTACACCAAGCCCCGTTTCCCTGTTTGCTTTTACTGACT  335

seq1  CCAGTTATAATCAGTCATCTGTACTAACACTCCGTCTCTTATCTTCTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTATAATCAGTCATCTGTACTAACACTCCGTCTCTTATCTTCTGCT  385

seq1  GGCAGAACAGATCGCATGTGCAAAGTGTCTCCATAGCATTTGGTGAACGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAACAGATCGCATGTGCAAAGTGTCTCCATAGCATTTGGTGAACGA  435

seq1  ATCTCAGTTTCTCCAATATTTTCTCTTATTGGAAATACTGCCTGAACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGTTTCTCCAATATTTTCTCTTATTGGAAATACTGCCTGAACAAA  485

seq1  GCCTACGCAGCTCTATCACATTGAGCAGGGCTCTGCTGAAATCGTAGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTACGCAGCTCTATCACATTGAGCAGGGCTCTGCTGAAATCGTAGTTA  535

seq1  TGGCCACGGTGGGCCTCTGTGATCACTTGCAGGGATTTTGGTGAAGCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCACGGTGGGCCTCTGTGATCACTTGCAGGGATTTTGGTGAAGCTCT  585

seq1  AGCTGTTGTGAGTGAACATCTAAGCAATTGTATTCTAGAAGGAGGGCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTGTGAGTGAACATCTAAGCAATTGTATTCTAGAAGGAGGGCATC  635

seq1  CATTAGTTAACAAGATGCTTTAAGCAGCAAAGCGGAGACTGGATGTAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGTTAACAAGATGCTTTAAGCAGCAAAGCGGAGACTGGATGTAAAT  685

seq1  GAATGTAAATGAAGAAGAAATATCCCTGGAAAGGAGTAGATGCCCTGCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTAAATGAAGAAGAAATATCCCTGGAAAGGAGTAGATGCCCTGCTA  735

seq1  GATTTTTCTCTCTTAATCAGTCTTGATTTTTATGGTGTATAACGCCTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTCTCTCTTAATCAGTCTTGATTTTTATGGTGTATAACGCCTTTT  785

seq1  TAAAAAACATAGTTTGCTCTTTATGTGGTGAAAGCCATTTTGGGGAATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAACATAGTTTGCTCTTTATGTGGTGAAAGCCATTTTGGGGAATGT  835

seq1  GGAGGAAGATCAAGCCCCAGGGTCTCATGCATGCTAGGCAAGATCTCTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAGATCAAGCCCCAGGGTCTCATGCATGCTAGGCAAGATCTCTAC  885

seq1  CACTGAGCTGTACTCGAAATCATCTTTACATTGGACACATGTCTGGTCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGCTGTACTCGAAATCATCTTTACATTGGACACATGTCTGGTCAA  935

seq1  GACACAAAAATATGTAGCATGATTAGTTTATAAAGACAGTAGGAATTCGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAAAAATATGTAGCATGATTAGTTTATAAAGACAGTAGGAATTCGC  985

seq1  ATCTAAAGTTATATGTAATATAAATAAGAGGGTTCAATGTGGGCAACTAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAGTTATATGTAATATAAATAAGAGGGTTCAATGTGGGCAACTAT  1035

seq1  ACACTTAAAGTTAACTTGTGCAGATTCAGTTATAACTTATTTTTCTGTTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTAAAGTTAACTTGTGCAGATTCAGTTATAACTTATTTTTCTGTTG  1085

seq1  AATTC  1105
      |||||
seq2  AATTC  1090

seq1: chr2_113404232_113404931
seq2: B6Ng01-091A14.g_67_766

seq1  GAATTCTCCGTAAATCTTGAACATGCTGCATGTTACATATACAGGACTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCGTAAATCTTGAACATGCTGCATGTTACATATACAGGACTTC  50

seq1  TTCAAAGTTACTATTGAATGATTCCTGAGGTTAGTAGGCACTGAGGACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGTTACTATTGAATGATTCCTGAGGTTAGTAGGCACTGAGGACAT  100

seq1  CTTGTCTAGGTTTATTCCTTCAATACAAATATACAAGATATTGATGTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTAGGTTTATTCCTTCAATACAAATATACAAGATATTGATGTATG  150

seq1  ATTTTAGTCATTTCTTATTCATTAAATGGAATATAACCAGAGAAAAACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGTCATTTCTTATTCATTAAATGGAATATAACCAGAGAAAAACTC  200

seq1  TTTTTTTTTAATTAGGTATTTTTTTCATTTACATTTCCAATGCTATACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTAATTAGGTATTTTTTTCATTTACATTTCCAATGCTATACCA  250

seq1  AAAGTCCCCATACCCTCCCCCCAACTTCCCTACCCACCCACTCCCACTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCCCATACCCTCCCCCCAACTTCCCTACCCACCCACTCCCACTTT  300

seq1  TTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTGCAAGACCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTGCAAGACCAA  350

seq1  TGGGCCTCTCTTTGCAATGATGGCCAACTAGGCCATCTTTCGATACATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCTCTCTTTGCAATGATGGCCAACTAGGCCATCTTTCGATACATAT  400

seq1  GCAGCTAGAGACACGAGCTCCAGGGGGTACTGGTTAGTTCATATTGTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTAGAGACACGAGCTCCAGGGGGTACTGGTTAGTTCATATTGTTAT  450

seq1  TCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAG  500

seq1  CTCCTCCATTGGGAGCCCTGTGATCCACCCAATAGCTGACTATGAGCATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCATTGGGAGCCCTGTGATCCACCCAATAGCTGACTATGAGCATC  550

seq1  CACTTCTGTGTTTGCTAGGCCCTGGCATAGCCTCACAAGAGACAGCTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTGTGTTTGCTAGGCCCTGGCATAGCCTCACAAGAGACAGCTATA  600

seq1  TCAGGTGCCTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTGCCTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGT  650

seq1  TTGGAGGCTGATTATGGGATGGATCCCCGGGGATGGCAGTCTCTAGATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGGCTGATTATGGGATGGATCCCCGGGGATGGCAGTCTCTAGATGG  700