BAC Information

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BAC

Clone NameB6Ng01-091B14
Chromosome2 (Build37)14 (Build37)
Map Location 80,331,836 - 80,332,22631,397,470 - 31,398,574
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSsfa2, Ppp1r1c, Pde1a, LOC668005, Prdx6-rs1, Dnajc10, Frzb
Downstream geneNckap1, LOC624223, Dusp19, LOC672381, Nup35, LOC103324, LOC668027, LOC100040624, LOC100040655
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091B14.bB6Ng01-091B14.g
ACCDH903225DH903226
length3821,088
definitionDH903225|Mus musculus domesticus DNA, BAC clone: B6Ng01-091B14, 5' end.DH903226|Mus musculus domesticus DNA, BAC clone: B6Ng01-091B14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(80,331,836 - 80,332,226)(31,397,470 - 31,398,574)
sequence
gaattctctggtggaatttttggggtcacttatgtatactatcatatcat
ctgcaaagagtgatatgttaacttcttcctttccaatttgtatccctctg
acctccttttgttgtctaattgctctggccagaacttcaagtactatatt
gaatagatagggagaaaatgggcagccttgtcttgtccctgattttaggg
aatgctctatttaatttgatgttggttactggtttgctgtagattgcttt
tactatgtttaggtatgggccttgaattcctgatcttttcaagactttta
ccatgaaggggtgttaaattttgtcaaattctttctcagcatttaatgag
atgatcatgtggttttttttctttgagtttgt
gaattctctggggtgagtatgtcttggttcacgtgtcccctgggaaagtc
aagtccctcaggccagggcaagcctcaggcctaggaacagaggcattccc
cacagactaaaagcaggtgctggcctctcagtgaaagaggacatgaatgt
ctcagggctgaatctaggagggggttgcaaaggaggttaaaagggctgaa
attacatctctgctgttttatttctccatctgggacgatcattctctcca
agttttttcgtatctgaaagtttgcttaacaattttgtcagaaagagcca
ccatctcccctaatgttgggccccttccctctacccgtatggaaggcccg
cccacacagggctcactctctcctgaccgactcagaaaggtcacagacac
acacacaatacattctgctgcagtcttttgttttgaagtttgctgattgc
ttgtctgggggaaatcttccctttccctttaacccctgaggcgctgatct
cctccagctctgcgcaagccttggagcaggcctttgaattggtagagcac
tggcatctgaggctggagcacgttgccttctgtctccaggcaagtcatta
ggccaatgctgcccgagctgagccccccgtgtgagtgtgctcaccacctc
cgaccaaaaccgcgaggctcacaattcccaccacagtgcggtctcctacc
actccaggcactggtggagtcactctgttcatttaaacctgtcagctcct
ctccagccagggctggcgctgtcactctgtggagacaggggacagccacc
aggactgataacattcagggaccacacattcacagtcttaccctccacat
gcacagccccaggactgtctgctgctgcagcttctctgcccgggctgctt
tcctgacctcagcttctcgccgactcgttctttttcatgttcaaaacttg
gagatggcacatccacaagagaacacagaacaaacggcacagtgtaagag
ccgtcataaaagacctggcaggtcagagttgacgtctttaaagcacttgt
tatcatgaactctcttttgaacatgacagcaaactaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_80331836_80332226
seq2: B6Ng01-091B14.b_49_427 (reverse)

seq1  ACAAACTCAAAG-ACAAAAACCACATGATCATCTCGTTAGATGCGGAGAA  49
      |||||||||||| | |||||||||||||||||||| ||| |||| |||||
seq2  ACAAACTCAAAGAAAAAAAACCACATGATCATCTCATTAAATGCTGAGAA  50

seq1  AGCATTTGACAAAATCTAACACCCATTCATGATAAAAGCCTTGGAAAGAT  99
      || |||||||||||| |||||||| |||||| |||||| |||| ||||||
seq2  AGAATTTGACAAAATTTAACACCCCTTCATGGTAAAAGTCTTGAAAAGAT  100

seq1  CAGGAATTCAAGGCCCATACCTAAACATGATAAAAGCAATCTACAGCAAA  149
      ||||||||||||||||||||||||||||  ||||||||||||||||||||
seq2  CAGGAATTCAAGGCCCATACCTAAACATAGTAAAAGCAATCTACAGCAAA  150

seq1  CCAGTAGCCAACATCAAAGTAAATGGTGAGAAGCTGGAAGCATTCCCACT  199
      |||||| ||||||||||| ||||| |            ||||||||  ||
seq2  CCAGTAACCAACATCAAATTAAATAG------------AGCATTCC--CT  186

seq1  AAAATCAGGGACTAGACAAGGCTGCCCACTTTCTCCATATCTATTCAACA  249
      |||||||||||| ||||||||||||||| ||||||| ||||||||||| |
seq2  AAAATCAGGGACAAGACAAGGCTGCCCATTTTCTCCCTATCTATTCAATA  236

seq1  TAGTATTTGAAGTTCTAGCCAGAGCAATTCGACAAC-AAAGGAGATCAAA  298
      ||||| |||||||||| |||||||||||| |||||| ||||||| ||| |
seq2  TAGTACTTGAAGTTCTGGCCAGAGCAATTAGACAACAAAAGGAGGTCAGA  286

seq1  GGGATACAAATTGGAAAGGAAGAAGTTAAAATATCACTTTTTGCAGATGA  348
      ||||||||||||||||||||||||||||| |||||||| |||||||||||
seq2  GGGATACAAATTGGAAAGGAAGAAGTTAACATATCACTCTTTGCAGATGA  336

seq1  TATAATAGTATATATAAGTGACCCTAAAAATTCCACCAGAGAA  391
      ||| |||||||| ||||||||||| ||||||||||||||||||
seq2  TATGATAGTATACATAAGTGACCCCAAAAATTCCACCAGAGAA  379

seq1: chr14_31397470_31398574
seq2: B6Ng01-091B14.g_69_1156

seq1  GAATTCTCTGGGGTGAGTATGTCTTGGTTCACGTGTCCCCTGGGAAAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGGGTGAGTATGTCTTGGTTCACGTGTCCCCTGGGAAAGTC  50

seq1  AAGTCCCTCAGGCCAGGGCAAGCCTCAGGCCTAGGAACAGAGGCATTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCTCAGGCCAGGGCAAGCCTCAGGCCTAGGAACAGAGGCATTCCC  100

seq1  CACAGACTAAAAGCAGGTGCTGGCCTCTCAGTGAAAGAGGACATGAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACTAAAAGCAGGTGCTGGCCTCTCAGTGAAAGAGGACATGAATGT  150

seq1  CTCAGGGCTGAATCTAGGAGGGGGTTGCAAAGGAGGTTAAAAGGGCTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGCTGAATCTAGGAGGGGGTTGCAAAGGAGGTTAAAAGGGCTGAA  200

seq1  ATTACATCTCTGCTGTTTTATTTCTCCATCTGGGACGATCATTCTCTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATCTCTGCTGTTTTATTTCTCCATCTGGGACGATCATTCTCTCCA  250

seq1  AGTTTTTTCGTATCTGAAAGTTTGCTTAACAATTTTGTCAGAAAGAGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTTCGTATCTGAAAGTTTGCTTAACAATTTTGTCAGAAAGAGCCA  300

seq1  CCATCTCCCCTAATGTTGGGCCCCTTCCCTCTACCCGTATGGAAGGCCCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCCCCTAATGTTGGGCCCCTTCCCTCTACCCGTATGGAAGGCCCG  350

seq1  CCCACACAGGGCTCACTCTCTCCTGACCGACTCAGAAAGGTCACAGACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACAGGGCTCACTCTCTCCTGACCGACTCAGAAAGGTCACAGACAC  400

seq1  ACACACAATACATTCTGCTGCAGTCTTTTGTTTTGAAGTTTGCTGATTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAATACATTCTGCTGCAGTCTTTTGTTTTGAAGTTTGCTGATTGC  450

seq1  TTGTCTGGGGGAAATCTTCCCTTTCCCTTTAACCCCTGAGGCGCTGATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGGGGGAAATCTTCCCTTTCCCTTTAACCCCTGAGGCGCTGATCT  500

seq1  CCTCCAGCTCTGCGCAAGCCTTGGAGCAGGCCTTTGAATTGGTAGAGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGCTCTGCGCAAGCCTTGGAGCAGGCCTTTGAATTGGTAGAGCAC  550

seq1  TGGCATCTGAGGCTGGAGCACGTTGCCTTCTGTCTCCAGGCAAGTCATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATCTGAGGCTGGAGCACGTTGCCTTCTGTCTCCAGGCAAGTCATTA  600

seq1  GGCCAATGCTGCCCGAGCTGAGCCCCCCGTGTGAGTGTGCTCACCACCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAATGCTGCCCGAGCTGAGCCCCCCGTGTGAGTGTGCTCACCACCTC  650

seq1  CGACCAAAACCGCGAGGCTCACAATTCCCACCACAGTGCGGTCTCCTACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACCAAAACCGCGAGGCTCACAATTCCCACCACAGTGCGGTCTCCTACC  700

seq1  ACTCCAGGCACTGGTGGAGTCACTCTGTTCATTTAAACCTGTCAGCTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGGCACTGGTGGAGTCACTCTGTTCATTTAAACCTGTCAGCTCCT  750

seq1  CTCCAGCCAGGGCTGGCGCTGTCACTCTGTGGAGACAGGGGACAGCCACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCCAGGGCTGGCGCTGTCACTCTGTGGAGACAGGGGACAGCCACC  800

seq1  AGGACTGATAACATTCAGGGACCACACATTCACAGTCTTACCCTCCACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGATAACATTCAGGGACCACACATTCACAGTCTTACCCTCCACAT  850

seq1  GCACAGCCCCCAGGACTGTCTGCTGCTGCAGCTTCTCTGCCCGGGCTGCT  900
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAG-CCCCAGGACTGTCTGCTGCTGCAGCTTCTCTGCCCGGGCTGCT  899

seq1  TTCCTGACCTCAGCTTCTCGCCGACTCGTTCTTTTTCATGTTTCAAAAAC  950
      ||||||||||||||||||||||||||||||||||||||||||   |||||
seq2  TTCCTGACCTCAGCTTCTCGCCGACTCGTTCTTTTTCATGTT--CAAAAC  947

seq1  TTGGAGATGGCACATCCACAAAGAGAAACACAGAACAAAC-GCACAGTGT  999
      ||||||||||||||||||| ||||| |||||||||||||| |||||||||
seq2  TTGGAGATGGCACATCCAC-AAGAG-AACACAGAACAAACGGCACAGTGT  995

seq1  AAGGAGCCGTCATAAAAGGACCTGGCAGGTCAAGAGTTGGAACGTTCTTT  1049
      || |||||||||||||| ||||||||||||| |||||||  ||| |||||
seq2  AA-GAGCCGTCATAAAA-GACCTGGCAGGTC-AGAGTTG--ACG-TCTTT  1039

seq1  TAAAAGCAC-TGTTAAATCATGA--CCTCTTTTGAACATGGACAAGCATA  1096
        ||||||| ||||  |||||||   ||||||||||||| ||| |||   
seq2  --AAAGCACTTGTT--ATCATGAACTCTCTTTTGAACAT-GAC-AGC---  1080

seq1  AAAACTAAA  1105
       ||||||||
seq2  -AAACTAAA  1088