BAC Information

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BAC

Clone NameB6Ng01-091G15
Chromosome2 (Build37)
Map Location 142,776,691 - 142,777,698
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091G15.bB6Ng01-091G15.g
ACCDH903446DH903447
length9591,236
definitionDH903446|Mus musculus domesticus DNA, BAC clone: B6Ng01-091G15, 5' end.DH903447|Mus musculus domesticus DNA, BAC clone: B6Ng01-091G15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagctctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaagctttggagtttca
tgaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactagatggttttagctcccttgtcgaagatcaagt
gactataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgactgtctatataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggactggcatggtgattccaccagaagttcttt
tatccttgagaagattttttgctatcctaggttttttcttattccagacg
aatttgcaaattgctccttccaattcgttgaagaattgagttagaatttt
gatggggattacattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagtctttaatcat
acagatctttcacttccttagtagagtcacgccaagatattttatattat
ttgtgacta
gaattctgtaaggaaaactccaacacatggaagatatctacaccaaagaa
aggacaaactattaatcatttcagaaccaagtaaaaagcagagagccaca
atcacataaaataacctaccaaaacaaacatctcaggaaccaacagtcat
atctctttaatatctctcaataataatggattcaactcacctaaaaaaga
cataagctaacagactgagtatgcaaacaagatccagcattttgctacat
ataagaaacacacctcaacaacaaagacaggcactatatcacagtaaaag
gatgggaaaatgtcttccaagcaaatggtccaaagaaacaagcaggagtt
gccatcctgatatccaataaaatagactttcaaccaaaagttattaagtg
tgatgaagaacattttatattcatcaaggggaaaatccaccaagagaaag
tctcaattctgaacatctatgctacaaatgcaagagtgcccaaattcata
aaaaaaaataaaaaaaaataacaactttactaaaactcaaaacacacagt
gaaccccacaaaatgatagtgggagacttcaacatcctactttcaccaat
agacaggtcattgaaacagaaactaaaaaacaaacaaacaaaaaacagtg
aaactaagaaagattagaaacaaatgaatttaacagaaatctacagaaca
ttttaccctaaaacaatcgaatacatcttctcagcaccacattgtacctt
ctccaaaattgaccatataattggtcacaaaacaacactcaacacataca
agaagattgaaataataccatgcatcctatcagatcactatggcctaagg
ttggtcttcaataacagaaaaactacagaaatcccaaatacatgtggaaa
ctgtacaactcttattcaatcataacttagggaaagataaaaaaagaaat
taaagacttcttggaatttaatgaaaatattgacacatcatacccaaaat
tatgggaaacatgaaagcatgctagaggaaagttcatagactgggtgcct
ggtaagaactggagagatcttacactaacaactaacagccaccctgaaag
ttctggagcaaaagaagcaactacccagaggagtaaagggcagaaatgtc
actcaggtctaatcgctaggaccagatctccagatcgcaatcaagcgagt
cttggagaataaccaatgggtgaatccgagtgcgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776691_142777698
seq2: B6Ng01-091G15.b_43_590 (reverse)

seq1  AATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCAC  50
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATAGTCAC  50

seq1  TTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAGAAAGACAGCAT  100
      |||||||||||||||||||||||||||||| || ||||||||||||||||
seq2  TTGATCTTCGACAAGGGAGCTAAAACCATCTAGTGGAAGAAAGACAGCAT  100

seq1  TTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGG  150
      |||||||||||||||||||||||||||||||||||| |||||||||||| 
seq2  TTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCGTGTAGAAGAATGC  150

seq1  GAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATC  200

seq1  AAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGT  250

seq1  GGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATTCCTGAACAGAA  300
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGAACAGAA  300

seq1  CAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATG  350
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTCATG  350

seq1  AAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAG  400
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAACTCCAAAGCTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAG  400

seq1  ACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGG  450

seq1  GACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAA  500
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GACTAATATCCAACATATATAAAGAGCTCAAGAAGGTGGACTTCAGAAAA  500

seq1  TCAAATAACCCCATTAAAAAATGGGGCTCACAAAACCATCCAGTGGAAGA  550
      |||||||||||||||||||||||||||||| ||            ||| |
seq2  TCAAATAACCCCATTAAAAAATGGGGCTCAGAA----------CTGAACA  540

seq1  AAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGT  600
      ||||    |||                                       
seq2  AAGA----ATTC--------------------------------------  548

seq1  AGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATC  650
                                                        
seq2  --------------------------------------------------  548

seq1  TAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAG  700
                                                        
seq2  --------------------------------------------------  548

seq1  AGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTC  750
                                                        
seq2  --------------------------------------------------  548

seq1  CTGAACAGAAGAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATG  800
                                                        
seq2  --------------------------------------------------  548

seq1  GGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACTGTCTATA  850
                                                        
seq2  --------------------------------------------------  548

seq1  AGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTACCTATCCTAAA  900
                                                        
seq2  --------------------------------------------------  548

seq1  TCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGA  950
                                                        
seq2  --------------------------------------------------  548

seq1  CCTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAACTGAACA  1000
                                                        
seq2  --------------------------------------------------  548

seq1  AAGAATTC  1008
              
seq2  --------  548