BAC Information

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BAC

Clone NameB6Ng01-091J09
Chromosome2 (Build37)
Map Location 64,290,784 - 64,504,021
singlet/doubletdoublet
Overlap geneLOC620544
Upstream geneEG667257, Fign
Downstream geneLOC667291, Grb14, Cobll1, LOC383705, 9330158F14Rik, Scn3a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091J09.bB6Ng01-091J09.g
ACCDH903570DH903571
length7951,003
definitionDH903570|Mus musculus domesticus DNA, BAC clone: B6Ng01-091J09, 5' end.DH903571|Mus musculus domesticus DNA, BAC clone: B6Ng01-091J09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,290,784 - 64,291,578)(64,503,018 - 64,504,021)
sequence
gaattcttagagtggctccacgtgtttgcacagaaagctcttcaagtgct
tctaactcattagaatgaattatgtcaattaccaccagcagatctggaaa
catttgaatctgatggagagggatcccccccccccccgcccgagcatcca
aggatattaggcaatccctaattcaaaccagttagcacagtatagttcct
cgagaagctaacctatgagaattctattcccaatattgggataaagttgc
ctctctgaaaggccaggcaattagggagaggagtttagagaactcaagat
gatgccgttccttacagtaaagtctatcccagaagcatctcagacccaag
aaacgtcatctgctgttaatatgccctggaagaggatgagacaggagtca
gtgttatgaaccagtaggcatcccgcctacattttataagtgtgatgttt
ctgacattgttcactggtcttaacacaacatatctcagaaaagatcacag
aattcagccattttttcttcatatttcttctaaagaagcttaagtattat
cacatcaccatccaatgttaaaatcactctatcttacgacaagggatgta
agtaacaatgcatagtcatgtaaagttagaaggacaaaactgttggcaga
agactactctgttttaaagataagtcatgtgatgtgctaaacaattattt
taattatgggaatagattaggatagtatcttaactgcatgaattagtata
gaataatgcagagagaagaggaaaggcaggagggagggggaggca
gaattcatctcaatctttaaccaagcaacatgctaattaaatacctctag
tattttcttctatctcttaaataatgtaataatacattggtgtataagtt
aggaagctacatttgagcaatgtgtttaggacttcttatattgtctcctc
tcactcgttgtattaacacattctgccctttagtcagaatgttagtataa
ttttattagaaaatgtcatatctttcttgttaccatgtttgacaaggcta
gtcatagacatgaaagattttagtaagttgaattatataattacaaaaat
caagttggtcaggaataaatttatttttaaactaagtttgggtattgtta
acatggcaaaaacctaatcaatcctgagaacaatgagtctcagttaagga
attctgtacatcagattggcctatagagtgtcttttgggctttctttctt
tctttctttctttctttctttctttctttctttctttcaggttttacttc
catttattcatttaatttctacatcacatttcaccatcaatggaagtcaa
agcaggtattcaaaacaggactttgaagcaaaggctttatgaaggcttgg
tctccatggcttgcttggcttgttttcttagaacacccaaaatcacttgg
ttggtaccaaccacagtgggctgtgtccctatataaatctttaatcagat
atggtcattgtattatctaatgctggcaattcttactgagtttcctcttc
ttagtcaactatataaatttatcaacttacagtataactcatagcaaaat
attattatgaatattctgggtataaaatctacactggatattcaataaaa
ccttttaaataaatggaatcaagttctatggttcaatgatagctgtcaag
atacttgcctacccatttataagataaataataaccaacaggctttttct
taatgtctagtcaatgtaggagagtcctaaccactgtggggggggggtaa
tat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_64290784_64291578
seq2: B6Ng01-091J09.b_45_839

seq1  GAATTCTTAGAGTGGCTCCACGTGTTTGCACAGAAAGCTCTTCAAGTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGAGTGGCTCCACGTGTTTGCACAGAAAGCTCTTCAAGTGCT  50

seq1  TCTAACTCATTAGAATGAATTATGTCAATTACCACCAGCAGATCTGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACTCATTAGAATGAATTATGTCAATTACCACCAGCAGATCTGGAAA  100

seq1  CATTTGAATCTGATGGAGAGGGATCCCCCCCCCCCCCGCCCGAGCATCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGAATCTGATGGAGAGGGATCCCCCCCCCCCCCGCCCGAGCATCCA  150

seq1  AGGATATTAGGCAATCCCTAATTCAAACCAGTTAGCACAGTATAGTTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATATTAGGCAATCCCTAATTCAAACCAGTTAGCACAGTATAGTTCCT  200

seq1  CGAGAAGCTAACCTATGAGAATTCTATTCCCAATATTGGGATAAAGTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGAAGCTAACCTATGAGAATTCTATTCCCAATATTGGGATAAAGTTGC  250

seq1  CTCTCTGAAAGGCCAGGCAATTAGGGAGAGGAGTTTAGAGAACTCAAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGAAAGGCCAGGCAATTAGGGAGAGGAGTTTAGAGAACTCAAGAT  300

seq1  GATGCCGTTCCTTACAGTAAAGTCTATCCCAGAAGCATCTCAGACCCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCGTTCCTTACAGTAAAGTCTATCCCAGAAGCATCTCAGACCCAAG  350

seq1  AAACGTCATCTGCTGTTAATATGCCCTGGAAGAGGATGAGACAGGAGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGTCATCTGCTGTTAATATGCCCTGGAAGAGGATGAGACAGGAGTCA  400

seq1  GTGTTATGAACCAGTAGGCATCCCGCCTACATTTTATAAGTGTGATGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTATGAACCAGTAGGCATCCCGCCTACATTTTATAAGTGTGATGTTT  450

seq1  CTGACATTGTTCACTGGTCTTAACACAACATATCTCAGAAAAGATCACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATTGTTCACTGGTCTTAACACAACATATCTCAGAAAAGATCACAG  500

seq1  AATTCAGCCATTTTTTCTTCATATTTCTTCTAAAGAAGCTTAAGTATTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGCCATTTTTTCTTCATATTTCTTCTAAAGAAGCTTAAGTATTAT  550

seq1  CACATCACCATCCAATGTTAAAATCACTCTATCTTACGACAAGGGATGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCACCATCCAATGTTAAAATCACTCTATCTTACGACAAGGGATGTA  600

seq1  AGTAACAATGCATAGTCATGTAAAGTTAGAAGGACAAAACTGTTGGCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACAATGCATAGTCATGTAAAGTTAGAAGGACAAAACTGTTGGCAGA  650

seq1  AGACTACTCTGTTTTAAAGATAAGTCATGTGATGTGCTAAACAATTATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTACTCTGTTTTAAAGATAAGTCATGTGATGTGCTAAACAATTATTT  700

seq1  TAATTATGGGAATAGATTAGGATAGTATCTTAACTGCATGAATTAGTATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATGGGAATAGATTAGGATAGTATCTTAACTGCATGAATTAGTATA  750

seq1  GAATAATGCAGAGAGAAGAGGAAAGGCAGGAGGGAGGGGGAGGCA  795
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAATGCAGAGAGAAGAGGAAAGGCAGGAGGGAGGGGGAGGCA  795

seq1: chr2_64503018_64504021
seq2: B6Ng01-091J09.g_69_1071 (reverse)

seq1  ATATTACCCCCCCCCCCACAGTGGTTAGGACTCTCCTACATTGACTAGAC  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTA-CCCCCCCCCCACAGTGGTTAGGACTCTCCTACATTGACTAGAC  49

seq1  ATTAAGAAAAAGCCTGTTGGTTATTATTTATCTTATAAATGGGTAGGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAAAAAGCCTGTTGGTTATTATTTATCTTATAAATGGGTAGGCAA  99

seq1  GTATCTTGACAGCTATCATTGAACCATAGAACTTGATTCCATTTATTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTTGACAGCTATCATTGAACCATAGAACTTGATTCCATTTATTTAA  149

seq1  AAGGTTTTATTGAATATCCAGTGTAGATTTTATACCCAGAATATTCATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTTATTGAATATCCAGTGTAGATTTTATACCCAGAATATTCATAA  199

seq1  TAATATTTTGCTATGAGTTATACTGTAAGTTGATAAATTTATATAGTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTTGCTATGAGTTATACTGTAAGTTGATAAATTTATATAGTTGA  249

seq1  CTAAGAAGAGGAAACTCAGTAAGAATTGCCAGCATTAGATAATACAATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAAGAGGAAACTCAGTAAGAATTGCCAGCATTAGATAATACAATGA  299

seq1  CCATATCTGATTAAAGATTTATATAGGGACACAGCCCACTGTGGTTGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATCTGATTAAAGATTTATATAGGGACACAGCCCACTGTGGTTGGTA  349

seq1  CCAACCAAGTGATTTTGGGTGTTCTAAGAAAACAAGCCAAGCAAGCCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCAAGTGATTTTGGGTGTTCTAAGAAAACAAGCCAAGCAAGCCATG  399

seq1  GAGACCAAGCCTTCATAAAGCCTTTGCTTCAAAGTCCTGTTTTGAATACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCAAGCCTTCATAAAGCCTTTGCTTCAAAGTCCTGTTTTGAATACC  449

seq1  TGCTTTGACTTCCATTGATGGTGAAATGTGATGTAGAAATTAAATGAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGACTTCCATTGATGGTGAAATGTGATGTAGAAATTAAATGAATA  499

seq1  AATGGAAGTAAAACCTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAAGTAAAACCTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  549

seq1  AAGAAAGAAAGAAAGCCCAAAAGACACTCTATAGGCCAATCTGATGTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAGAAAGCCCAAAAGACACTCTATAGGCCAATCTGATGTACA  599

seq1  GAATTCCTTAACTGAGACTCATTGTTCTCAGGATTGATTAGGTTTTTGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAACTGAGACTCATTGTTCTCAGGATTGATTAGGTTTTTGCC  649

seq1  ATGTTAACAATACCCAAACTTAGTTTAAAAATAAATTTATTCCTGACCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAACAATACCCAAACTTAGTTTAAAAATAAATTTATTCCTGACCAA  699

seq1  CTTGATTTTTGTAATTATATAATTCAACTTACTAAAATCTTTCATGTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTTTTGTAATTATATAATTCAACTTACTAAAATCTTTCATGTCTA  749

seq1  TGACTAGCCTTGTCAAACATGGTAACAAGAAAGATATGACATTTTCTAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAGCCTTGTCAAACATGGTAACAAGAAAGATATGACATTTTCTAAT  799

seq1  AAAATTATACTAACATTCTGACTAAAGGGCAGAATGTGTTAATACAACGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTATACTAACATTCTGACTAAAGGGCAGAATGTGTTAATACAACGA  849

seq1  GTGAGAGGAGACAATATAAGAAGTCCTAAACACATTGCTCAAATGTAGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAGGAGACAATATAAGAAGTCCTAAACACATTGCTCAAATGTAGCT  899

seq1  TCCTAACTTATACACCAATGTATTATTACATTATTTAAGAGATAGAAGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAACTTATACACCAATGTATTATTACATTATTTAAGAGATAGAAGAA  949

seq1  AATACTAGAGGTATTTAATTAGCATGTTGCTTGGTTAAAGATTGAGATGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTAGAGGTATTTAATTAGCATGTTGCTTGGTTAAAGATTGAGATGA  999

seq1  ATTC  1004
      ||||
seq2  ATTC  1003